RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 LIN54Q6MZP7 749 aa9□□□□□ -0.97
SQSTM1-203ENST00000422245 ZNF880Q6PDB4 577 aa9□□□□□ -0.97
SQSTM1-203ENST00000422245 FAM131AQ6UXB0 335 aa9□□□□□ -0.97
SQSTM1-203ENST00000422245 CEACAM19Q7Z692 300 aa9□□□□□ -0.97
SQSTM1-203ENST00000422245 TCTEX1D1Q8N7M0 179 aa9□□□□□ -0.97
SQSTM1-203ENST00000422245 ZNF491Q8N8L2 437 aa9□□□□□ -0.97
SQSTM1-203ENST00000422245 UFD1Q92890 307 aa9□□□□□ -0.97
SQSTM1-203ENST00000422245 NICN1Q9BSH3 213 aa9□□□□□ -0.97
SQSTM1-203ENST00000422245 URM1Q9BTM9 101 aaKnown RBP9□□□□□ -0.97
SQSTM1-203ENST00000422245 FAAP24Q9BTP7 215 aa9□□□□□ -0.97
SQSTM1-203ENST00000422245 GHITMQ9H3K2 345 aa9□□□□□ -0.97
SQSTM1-203ENST00000422245 PLEKHJ1Q9NW61 149 aa9□□□□□ -0.97
SQSTM1-203ENST00000422245 SCN3BQ9NY72 215 aa9□□□□□ -0.97
SQSTM1-203ENST00000422245 MGAT4AQ9UM21 535 aa9□□□□□ -0.97
SQSTM1-203ENST00000422245 I3L521 148 aa8.99□□□□□ -0.97
SQSTM1-203ENST00000422245 ITGB1BP1O14713 200 aa8.99□□□□□ -0.97
SQSTM1-203ENST00000422245 CD37P11049 281 aa8.99□□□□□ -0.97
SQSTM1-203ENST00000422245 ECI1P42126 302 aa8.99□□□□□ -0.97
SQSTM1-203ENST00000422245 CRIP2P52943 208 aaPredicted RBP8.99□□□□□ -0.97
SQSTM1-203ENST00000422245 HLA-DRB3P79483 266 aa8.99□□□□□ -0.97
SQSTM1-203ENST00000422245 NDPQ00604 133 aa8.99□□□□□ -0.97
SQSTM1-203ENST00000422245 KIAA0141Q14154 515 aaPredicted RBP8.99□□□□□ -0.97
SQSTM1-203ENST00000422245 MED22Q15528 200 aa8.99□□□□□ -0.97
SQSTM1-203ENST00000422245 ZNF260Q3ZCT1 412 aa8.99□□□□□ -0.97
SQSTM1-203ENST00000422245 ZNF660Q6AZW8 331 aaPredicted RBP8.99□□□□□ -0.97
SQSTM1-203ENST00000422245 C5orf24Q7Z6I8 188 aa8.99□□□□□ -0.97
SQSTM1-203ENST00000422245 MINDY2Q8NBR6 621 aa8.99□□□□□ -0.97
SQSTM1-203ENST00000422245 OR1N2Q8NGR9 330 aa8.99□□□□□ -0.97
SQSTM1-203ENST00000422245 SETD6Q8TBK2 473 aa8.99□□□□□ -0.97
SQSTM1-203ENST00000422245 EDARADDQ8WWZ3 215 aa8.99□□□□□ -0.97
SQSTM1-203ENST00000422245 RITA1Q96K30 269 aa8.99□□□□□ -0.97
SQSTM1-203ENST00000422245 PRR25Q96S07 402 aa8.99□□□□□ -0.97
SQSTM1-203ENST00000422245 KLK15Q9H2R5 256 aa8.99□□□□□ -0.97
SQSTM1-203ENST00000422245 KCNK15Q9H427 330 aa8.99□□□□□ -0.97
SQSTM1-203ENST00000422245 GNB4Q9HAV0 340 aa8.99□□□□□ -0.97
SQSTM1-203ENST00000422245 C12orf4Q9NQ89 552 aa8.99□□□□□ -0.97
SQSTM1-203ENST00000422245 SCOCQ9UIL1 159 aa8.99□□□□□ -0.97
SQSTM1-203ENST00000422245 LSM4Q9Y4Z0 139 aaKnown RBP8.99□□□□□ -0.97
SQSTM1-203ENST00000422245 PTGES3LE9PB15 166 aa8.98□□□□□ -0.97
SQSTM1-203ENST00000422245 H0YJW9 148 aa8.98□□□□□ -0.97
SQSTM1-203ENST00000422245 SLC17A2O00624 439 aa8.98□□□□□ -0.97
SQSTM1-203ENST00000422245 RRHO14718 337 aa8.98□□□□□ -0.97
SQSTM1-203ENST00000422245 ARL6IP5O75915 188 aa8.98□□□□□ -0.97
SQSTM1-203ENST00000422245 ARSBP15848 533 aa8.98□□□□□ -0.97
SQSTM1-203ENST00000422245 PSMA1P25786 263 aaKnown RBP8.98□□□□□ -0.97
SQSTM1-203ENST00000422245 MC5RP33032 325 aa8.98□□□□□ -0.97
SQSTM1-203ENST00000422245 RAB9AP51151 201 aa8.98□□□□□ -0.97
SQSTM1-203ENST00000422245 IRF3Q14653 427 aa8.98□□□□□ -0.97
SQSTM1-203ENST00000422245 PLGLAQ15195 96 aa8.98□□□□□ -0.97
SQSTM1-203ENST00000422245 ECSCRQ19T08 205 aa8.98□□□□□ -0.97
SQSTM1-203ENST00000422245 RPL39P5Q59GN2 51 aa8.98□□□□□ -0.97
SQSTM1-203ENST00000422245 C19orf54Q5BKX5 351 aa8.98□□□□□ -0.97
SQSTM1-203ENST00000422245 ASPHD1Q5U4P2 390 aa8.98□□□□□ -0.97
SQSTM1-203ENST00000422245 LIPKQ5VXJ0 399 aa8.98□□□□□ -0.97
SQSTM1-203ENST00000422245 LPAR5Q9H1C0 372 aa8.98□□□□□ -0.97
SQSTM1-203ENST00000422245 PLGRKTQ9HBL7 147 aa8.98□□□□□ -0.97
SQSTM1-203ENST00000422245 FOXA2Q9Y261 457 aaPredicted RBP8.98□□□□□ -0.97
SQSTM1-203ENST00000422245 ZNF256Q9Y2P7 627 aaPredicted RBP8.98□□□□□ -0.97
SQSTM1-203ENST00000422245 WASHC3Q9Y3C0 194 aa8.98□□□□□ -0.97
SQSTM1-203ENST00000422245 STAB2Q8WWQ8 2551 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 A0A0A6YYD4 124 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 HSPA12AO43301 675 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 SPDEFO95238 335 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 CT45A6P0DMU7 189 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 CT45A5P0DMU8 189 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 CT45A7P0DMV0 189 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 ZBTB25P24278 435 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 RANBP1P43487 201 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 GNB1P62873 340 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 CX3CL1P78423 397 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 P2RY14Q15391 338 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 TRAM1Q15629 374 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 RAB11BQ15907 218 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 PYHIN1Q6K0P9 492 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 ZNF429Q86V71 674 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 FAM89BQ8N5H3 189 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 OR5AN1Q8NGI8 311 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 OR5B12Q96R08 314 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 RNF5Q99942 180 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 AGMATQ9BSE5 352 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 PARP12Q9H0J9 701 aaKnown RBP8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 FBXL15Q9H469 300 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 ISYNA1Q9NPH2 558 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 AK3Q9UIJ7 227 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 RNF150Q9ULK6 438 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 HSF4Q9ULV5 492 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 TPRKBQ9Y3C4 175 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 U3KQK5 164 aa8.97□□□□□ -0.97
SQSTM1-203ENST00000422245 A0A1W2PN81 502 aa8.96□□□□□ -0.98
SQSTM1-203ENST00000422245 FOXI3A8MTJ6 420 aaPredicted RBP8.96□□□□□ -0.98
SQSTM1-203ENST00000422245 H7C2Y5 167 aa8.96□□□□□ -0.98
SQSTM1-203ENST00000422245 OVOL1O14753 267 aa8.96□□□□□ -0.98
SQSTM1-203ENST00000422245 SOCS1O15524 211 aa8.96□□□□□ -0.98
SQSTM1-203ENST00000422245 GSTP1P09211 210 aaKnown RBP8.96□□□□□ -0.98
SQSTM1-203ENST00000422245 LGALS1P09382 135 aaKnown RBP8.96□□□□□ -0.98
SQSTM1-203ENST00000422245 HSMCR30P0CW71 290 aa8.96□□□□□ -0.98
SQSTM1-203ENST00000422245 CHRNA7P36544 502 aa8.96□□□□□ -0.98
SQSTM1-203ENST00000422245 TMEM267Q0VDI3 215 aaPredicted RBP8.96□□□□□ -0.98
SQSTM1-203ENST00000422245 TPBGQ13641 420 aa8.96□□□□□ -0.98
SQSTM1-203ENST00000422245 CD200R1LQ6Q8B3 271 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms