RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 RAB13P51153 203 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 MTPNP58546 118 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 PFN3P60673 137 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 RHOBP62745 196 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 SURF2Q15527 256 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 AKR1C8PQ5T2L2 129 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 KCTD16Q68DU8 428 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 OR10K2Q6IF99 312 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 LRRC28Q86X40 367 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 ZNF695Q8IW36 515 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 SLC35G3Q8N808 338 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 OR8J3Q8NGG0 315 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 OR2K2Q8NGT1 345 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 OR9A2Q8NGT5 310 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 OR4K15Q8NH41 348 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 SLC37A2Q8TED4 501 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 TAMM41Q96BW9 452 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 ACY3Q96HD9 319 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 DIRAS2Q96HU8 199 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 PYURFQ96I23 114 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 BIRC8Q96P09 236 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 VPS25Q9BRG1 176 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 TMEM70Q9BUB7 260 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 SFXN3Q9BWM7 321 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 EBPLQ9BY08 206 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 MROQ9BYG7 248 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 MAP1LC3BQ9GZQ8 125 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 OR51I2Q9H344 312 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 CISHQ9NSE2 258 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 TAS2R5Q9NYW4 299 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 KLK12Q9UKR0 248 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 CCDC144AA2RUR9 1427 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 YTHDC2Q9H6S0 1430 aaKnown RBP3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 MAPKBP1O60336 1514 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 MADDQ8WXG6 1647 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 STRCQ7RTU9 1775 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 MYO10Q9HD67 2058 aa3.07□□□□□ -1.92
HMGB1P10-201ENST00000395823 IGLV3-16A0A075B6K0 115 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 IGHV6-1A0A0B4J1U7 121 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 TRAV8-6A0A0B4J262 113 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 IGHV7-4-1A0A0J9YVY3 117 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 C5orf58C9J3I9 102 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 D6RAR5 112 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 TRAPPC2LH3BP13 241 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 CACNA1AO00555 2505 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 TXNDC9O14530 226 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 MYL12BO14950 172 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 RBFOX2O43251 390 aaKnown RBP eCLIP3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 CCDC22O60826 627 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 BANF1O75531 89 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 GPR75O95800 540 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 IFNGP01579 166 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 APOA2P02652 100 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 FBP1P09467 338 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 SMIM6P0DI80 62 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 AGTR1P30556 359 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 CXCL12P48061 93 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 SMARCA4P51532 1647 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 HSPE1P61604 102 aaKnown RBP3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 TBPL1P62380 186 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 HBG1P69891 147 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 HBG2P69892 147 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 GTF2BQ00403 316 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 PSG4Q00888 419 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 EMX1Q04741 257 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 CEACAM16Q2WEN9 425 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 CAMSAP1Q5T5Y3 1602 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 TMEM215Q68D42 235 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 SFXN4Q6P4A7 337 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 CALHM3Q86XJ0 350 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 OR9Q1Q8NGQ5 310 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 OR1L1Q8NH94 360 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 JOSD2Q8TAC2 188 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 UBALD1Q8TB05 177 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 PPP1R2P1Q96PQ5 205 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 CDX2Q99626 313 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 MARVELD1Q9BSK0 173 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 CCDC32Q9BV29 185 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 MND1Q9BWT6 205 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 VCXQ9H320 206 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 POMKQ9H5K3 350 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 METTL17Q9H7H0 456 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 DMAC2Q9NW81 257 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 COPZ2Q9P299 210 aa3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 CARHSP1Q9Y2V2 147 aaKnown RBP3.06□□□□□ -1.92
HMGB1P10-201ENST00000395823 ZNF518AQ6AHZ1 1483 aa3.05□□□□□ -1.92
HMGB1P10-201ENST00000395823 IFT140Q96RY7 1462 aa3.05□□□□□ -1.92
HMGB1P10-201ENST00000395823 BORCS7-ASMTA0A0B4J1R7 106 aa3.05□□□□□ -1.92
HMGB1P10-201ENST00000395823 TRAV8-2A0A0B4J237 113 aa3.05□□□□□ -1.92
HMGB1P10-201ENST00000395823 A0A1B0GV90 55 aa3.05□□□□□ -1.92
HMGB1P10-201ENST00000395823 EXOC1LA0A1B0GW35 172 aa3.05□□□□□ -1.92
HMGB1P10-201ENST00000395823 DLEU1O43261 78 aa3.05□□□□□ -1.92
HMGB1P10-201ENST00000395823 TTRP02766 147 aa3.05□□□□□ -1.92
HMGB1P10-201ENST00000395823 S100A8P05109 93 aa3.05□□□□□ -1.92
HMGB1P10-201ENST00000395823 TSPAN19P0C672 248 aa3.05□□□□□ -1.92
HMGB1P10-201ENST00000395823 ZNF688P0C7X2 276 aa3.05□□□□□ -1.92
HMGB1P10-201ENST00000395823 NELFEP18615 380 aaKnown RBP3.05□□□□□ -1.92
HMGB1P10-201ENST00000395823 OPRK1P41145 380 aa3.05□□□□□ -1.92
HMGB1P10-201ENST00000395823 PSMD8P48556 350 aa3.05□□□□□ -1.92
HMGB1P10-201ENST00000395823 PSMB2P49721 201 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms