RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 DEDDO75618 318 aa9.49□□□□□ -0.89
SMARCAL1-203ENST00000392128 CFDP00746 253 aaPredicted RBP9.49□□□□□ -0.89
SMARCAL1-203ENST00000392128 IGHV3-43DP0DP04 118 aa9.49□□□□□ -0.89
SMARCAL1-203ENST00000392128 LOXL3P58215 753 aa9.49□□□□□ -0.89
SMARCAL1-203ENST00000392128 NMSQ5H8A3 153 aa9.49□□□□□ -0.89
SMARCAL1-203ENST00000392128 CLEC18CQ8NCF0 446 aa9.49□□□□□ -0.89
SMARCAL1-203ENST00000392128 OR4D5Q8NGN0 318 aa9.49□□□□□ -0.89
SMARCAL1-203ENST00000392128 OR1S1Q8NH92 325 aa9.49□□□□□ -0.89
SMARCAL1-203ENST00000392128 AGMATQ9BSE5 352 aa9.49□□□□□ -0.89
SMARCAL1-203ENST00000392128 PLEKHF2Q9H8W4 249 aa9.49□□□□□ -0.89
SMARCAL1-203ENST00000392128 LINC00574Q9H8X3 128 aa9.49□□□□□ -0.89
SMARCAL1-203ENST00000392128 KBTBD11-OT1A0A1B0GTJ5 212 aa9.48□□□□□ -0.89
SMARCAL1-203ENST00000392128 KANTRA0A1W2PQU2 76 aa9.48□□□□□ -0.89
SMARCAL1-203ENST00000392128 MBPP02686 304 aaPredicted RBP9.48□□□□□ -0.89
SMARCAL1-203ENST00000392128 RLN2P04090 185 aa9.48□□□□□ -0.89
SMARCAL1-203ENST00000392128 SERPINE2P07093 398 aa9.48□□□□□ -0.89
SMARCAL1-203ENST00000392128 HTR2BP41595 481 aa9.48□□□□□ -0.89
SMARCAL1-203ENST00000392128 SMCO1Q147U7 214 aa9.48□□□□□ -0.89
SMARCAL1-203ENST00000392128 MORN2Q502X0 79 aa9.48□□□□□ -0.89
SMARCAL1-203ENST00000392128 ANKRD39Q53RE8 183 aa9.48□□□□□ -0.89
SMARCAL1-203ENST00000392128 TCF23Q7RTU1 214 aa9.48□□□□□ -0.89
SMARCAL1-203ENST00000392128 OR52M1Q8NGK5 317 aa9.48□□□□□ -0.89
SMARCAL1-203ENST00000392128 RRNAD1Q96FB5 475 aaKnown RBP9.48□□□□□ -0.89
SMARCAL1-203ENST00000392128 C5orf30Q96GV9 206 aa9.48□□□□□ -0.89
SMARCAL1-203ENST00000392128 AQP10Q96PS8 301 aa9.48□□□□□ -0.89
SMARCAL1-203ENST00000392128 GNG12Q9UBI6 72 aa9.48□□□□□ -0.89
SMARCAL1-203ENST00000392128 CLN8Q9UBY8 286 aa9.48□□□□□ -0.89
SMARCAL1-203ENST00000392128 UBQLN2Q9UHD9 624 aa9.48□□□□□ -0.89
SMARCAL1-203ENST00000392128 RNF150Q9ULK6 438 aa9.48□□□□□ -0.89
SMARCAL1-203ENST00000392128 ZNF729A6NN14 1252 aaPredicted RBP9.48□□□□□ -0.89
SMARCAL1-203ENST00000392128 TRIM77I1YAP6 450 aa9.48□□□□□ -0.89
SMARCAL1-203ENST00000392128 NUP62P37198 522 aaPredicted RBP9.48□□□□□ -0.89
SMARCAL1-203ENST00000392128 HFEQ30201 348 aa9.48□□□□□ -0.89
SMARCAL1-203ENST00000392128 TMEM30BQ3MIR4 351 aa9.48□□□□□ -0.89
SMARCAL1-203ENST00000392128 KAAG1Q9UBP8 84 aa9.48□□□□□ -0.89
SMARCAL1-203ENST00000392128 SLC25A10Q9UBX3 287 aaPredicted RBP9.48□□□□□ -0.89
SMARCAL1-203ENST00000392128 K7EPK0 472 aa9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 ITGB1BP1O14713 200 aa9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 NDUFA2O43678 99 aa9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 FSTL3O95633 263 aa9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 SCGB1D2O95969 90 aa9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 MEF2CQ06413 473 aaPredicted RBP9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 FAM219AQ8IW50 185 aa9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 FAM71E2Q8N5Q1 922 aa9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 CBLN4Q9NTU7 201 aa9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 PSG11Q9UQ72 335 aa9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 hADV38S2A0JD32 116 aa9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 ST8SIA5O15466 376 aa9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 ST8SIA3O43173 380 aa9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 KCNAB3O43448 404 aa9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 ADAM20O43506 726 aa9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 SLC25A6P12236 298 aa9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 UBA52P62987 128 aaKnown RBP9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 RELQ04864 619 aaPredicted RBP9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 CATR1Q13166 79 aa9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 LTC4SQ16873 150 aa9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 ZNF585BQ52M93 769 aa9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 ZNF66Q6ZN08 573 aa9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 FOXRED2Q8IWF2 684 aa9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 TCTEX1D1Q8N7M0 179 aa9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 LSM10Q969L4 123 aaKnown RBP9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 ABHD14BQ96IU4 210 aa9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 FAM212BQ9NTI7 297 aaPredicted RBP9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 SDHAF2Q9NX18 166 aa9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 GFOD1Q9NXC2 390 aa9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 LSM5Q9Y4Y9 91 aaKnown RBP9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 POMT1Q9Y6A1 747 aa9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 LINC00312Q9Y6C7 94 aa9.47□□□□□ -0.89
SMARCAL1-203ENST00000392128 MSGN1A6NI15 193 aa9.46□□□□□ -0.89
SMARCAL1-203ENST00000392128 E5RGE8 158 aa9.46□□□□□ -0.89
SMARCAL1-203ENST00000392128 IGKV1-39P01597 117 aa9.46□□□□□ -0.89
SMARCAL1-203ENST00000392128 IGKV1D-39P04432 117 aa9.46□□□□□ -0.89
SMARCAL1-203ENST00000392128 NDUFB7P17568 137 aa9.46□□□□□ -0.89
SMARCAL1-203ENST00000392128 S100A12P80511 92 aa9.46□□□□□ -0.89
SMARCAL1-203ENST00000392128 C11orf71Q6IPW1 123 aa9.46□□□□□ -0.89
SMARCAL1-203ENST00000392128 HSD17B10Q99714 261 aaKnown RBP9.46□□□□□ -0.89
SMARCAL1-203ENST00000392128 TAS2R3Q9NYW6 316 aa9.46□□□□□ -0.89
SMARCAL1-203ENST00000392128 NSG2Q9Y328 171 aa9.46□□□□□ -0.89
SMARCAL1-203ENST00000392128 NDUFB3O43676 98 aa9.46□□□□□ -0.9
SMARCAL1-203ENST00000392128 FCN3O75636 299 aa9.46□□□□□ -0.9
SMARCAL1-203ENST00000392128 HKR1P10072 659 aa9.46□□□□□ -0.9
SMARCAL1-203ENST00000392128 ZNF16P17020 682 aaPredicted RBP9.46□□□□□ -0.9
SMARCAL1-203ENST00000392128 OMGP23515 440 aa9.46□□□□□ -0.9
SMARCAL1-203ENST00000392128 CCDC28AQ8IWP9 274 aa9.46□□□□□ -0.9
SMARCAL1-203ENST00000392128 OR8H3Q8N146 312 aa9.46□□□□□ -0.9
SMARCAL1-203ENST00000392128 FGFRL1Q8N441 504 aa9.46□□□□□ -0.9
SMARCAL1-203ENST00000392128 PLEKHA2Q9HB19 425 aa9.46□□□□□ -0.9
SMARCAL1-203ENST00000392128 IDI2-AS1Q9NZ38 188 aa9.46□□□□□ -0.9
SMARCAL1-203ENST00000392128 LPAR3Q9UBY5 353 aa9.46□□□□□ -0.9
SMARCAL1-203ENST00000392128 ARID1AO14497 2285 aa9.46□□□□□ -0.9
SMARCAL1-203ENST00000392128 A0A1B0GU03 582 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 NKX2-1P43699 371 aaPredicted RBP9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 GPR12P47775 334 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 RAB7AP51149 207 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 RPL30P62888 115 aaKnown RBP9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 LRRC10Q5BKY1 277 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 LYPD2Q6UXB3 125 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 OR10A7Q8NGE5 316 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 ST8SIA2Q92186 375 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 RAB1BQ9H0U4 201 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms