RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 PRF1P14222 555 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 SIRT4Q9Y6E7 314 aaPredicted RBP8.33□□□□□ -1.08
SNX1-202ENST00000380285 IFNL4K9M1U5 179 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 EPHA8P29322 1005 aaPredicted RBP8.33□□□□□ -1.08
SNX1-202ENST00000380285 JOSD1Q15040 202 aaPredicted RBP8.33□□□□□ -1.08
SNX1-202ENST00000380285 OR8B3Q8NGG8 313 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 OR8B2Q96RD0 313 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 ZDHHC8Q9ULC8 765 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 RPS4XP62701 263 aaKnown RBP8.33□□□□□ -1.08
SNX1-202ENST00000380285 TWIST1Q15672 202 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 ZDHHC16Q969W1 377 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 SPSB4Q96A44 273 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 QTRT1Q9BXR0 403 aaKnown RBP8.33□□□□□ -1.08
SNX1-202ENST00000380285 MRPL32Q9BYC8 188 aaKnown RBP8.33□□□□□ -1.08
SNX1-202ENST00000380285 STAG3L3P0CL85 134 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 ZFP36L2P47974 494 aaKnown RBP8.33□□□□□ -1.08
SNX1-202ENST00000380285 ZXDAP98168 799 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 ALKBH6Q3KRA9 238 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 OR10AG1Q8NH19 301 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 FAM216AQ8WUB2 273 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 GPR61Q9BZJ8 451 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 HEXA-AS1Q9H8Q6 139 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 RTTNQ86VV8 2226 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 HOXB3P14651 431 aaPredicted RBP8.32□□□□□ -1.08
SNX1-202ENST00000380285 ZNF788Q6ZQV5 615 aa8.32□□□□□ -1.08
SNX1-202ENST00000380285 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.32□□□□□ -1.08
SNX1-202ENST00000380285 PKIBQ9C010 78 aa8.32□□□□□ -1.08
SNX1-202ENST00000380285 ID1P41134 155 aa8.32□□□□□ -1.08
SNX1-202ENST00000380285 SLC25A38Q96DW6 304 aa8.32□□□□□ -1.08
SNX1-202ENST00000380285 FAM60AQ9NP50 221 aa8.32□□□□□ -1.08
SNX1-202ENST00000380285 TAS2R60P59551 318 aa8.32□□□□□ -1.08
SNX1-202ENST00000380285 HOXA4Q00056 320 aaPredicted RBP8.32□□□□□ -1.08
SNX1-202ENST00000380285 K7N7A8 449 aa8.32□□□□□ -1.08
SNX1-202ENST00000380285 CDIPTO14735 213 aa8.32□□□□□ -1.08
SNX1-202ENST00000380285 CRXO43186 299 aaPredicted RBP8.32□□□□□ -1.08
SNX1-202ENST00000380285 NDUFB4O95168 129 aa8.32□□□□□ -1.08
SNX1-202ENST00000380285 LRRC75BQ2VPJ9 315 aa8.32□□□□□ -1.08
SNX1-202ENST00000380285 HIST1H2BAQ96A08 127 aa8.32□□□□□ -1.08
SNX1-202ENST00000380285 PCGF1Q9BSM1 259 aa8.32□□□□□ -1.08
SNX1-202ENST00000380285 PLXNA1Q9UIW2 1896 aa8.32□□□□□ -1.08
SNX1-202ENST00000380285 C2CD4DB7Z1M9 353 aa8.32□□□□□ -1.08
SNX1-202ENST00000380285 KBTBD11O94819 623 aa8.32□□□□□ -1.08
SNX1-202ENST00000380285 CLDN14O95500 239 aa8.32□□□□□ -1.08
SNX1-202ENST00000380285 GUSBP11Q6P575 273 aa8.32□□□□□ -1.08
SNX1-202ENST00000380285 RAB37Q96AX2 223 aa8.32□□□□□ -1.08
SNX1-202ENST00000380285 ABHD14AQ9BUJ0 271 aa8.32□□□□□ -1.08
SNX1-202ENST00000380285 PEF1Q9UBV8 284 aaKnown RBP8.32□□□□□ -1.08
SNX1-202ENST00000380285 UPK3AO75631 287 aa8.32□□□□□ -1.08
SNX1-202ENST00000380285 H2BFSP57053 126 aa8.32□□□□□ -1.08
SNX1-202ENST00000380285 SFTPA2Q8IWL1 248 aa8.32□□□□□ -1.08
SNX1-202ENST00000380285 SFTPA1Q8IWL2 248 aa8.32□□□□□ -1.08
SNX1-202ENST00000380285 INSIG2Q9Y5U4 225 aa8.32□□□□□ -1.08
SNX1-202ENST00000380285 ZNF721Q8TF20 911 aa8.32□□□□□ -1.08
SNX1-202ENST00000380285 IGHV1OR15-9A0A0B4J2B8 117 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 H3BVH4 76 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 TMPRSS2O15393 492 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 F12P00748 615 aaPredicted RBP8.31□□□□□ -1.08
SNX1-202ENST00000380285 FBXW9Q5XUX1 488 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 TPRP12270 2363 aaKnown RBP8.31□□□□□ -1.08
SNX1-202ENST00000380285 LOC390937A0A1W2PQ73 354 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 C1QL3Q5VWW1 255 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 PARP14Q460N5 1801 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 LYZL6O75951 148 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 CA7P43166 264 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 APCDD1LQ8NCL9 501 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 LHX9Q9NQ69 397 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 KLHDC2Q9Y2U9 406 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 A0A1B0GV72 72 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 TMEM189A5PLL7 270 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 MGST3O14880 152 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 NMUP48645 174 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 CSRP3P50461 194 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 RAB9AP51151 201 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 ZNF506Q5JVG8 444 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 STPG3Q8N7X2 389 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 POC1AQ8NBT0 407 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 TRGV8A0A0C4DH27 118 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 DLL1O00548 723 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 PPIHO43447 177 aaKnown RBP8.31□□□□□ -1.08
SNX1-202ENST00000380285 RND3P61587 244 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 AESQ08117 197 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 GAB4Q2WGN9 574 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 FAM219BQ5XKK7 198 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 CCL17Q92583 94 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 C3orf80F5H4A9 247 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 TMEM136Q6ZRR5 245 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 TCF24Q7RTU0 167 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 OR10S1Q8NGN2 331 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 OR1N2Q8NGR9 330 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 MAP1LC3AQ9H492 121 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 C5orf66Q9H5L9 145 aa8.31□□□□□ -1.08
SNX1-202ENST00000380285 CEACAM18A8MTB9 384 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 SPANXN1Q5VSR9 72 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 C9orf40Q8IXQ3 194 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 PDCD11Q14690 1871 aaKnown RBP8.3□□□□□ -1.08
SNX1-202ENST00000380285 ADAMTSL1Q8N6G6 1762 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 ITGBL1O95965 494 aaPredicted RBP8.3□□□□□ -1.08
SNX1-202ENST00000380285 RIPPLY2Q5TAB7 128 aa8.3□□□□□ -1.08
SNX1-202ENST00000380285 KCNK17Q96T54 332 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms