RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 FNDC9Q8TBE3 224 aa0.68□□□□□ -2.3
RNU4-28P-201ENST00000364739 CYGBQ8WWM9 190 aa0.68□□□□□ -2.3
RNU4-28P-201ENST00000364739 ASB17Q8WXJ9 295 aa0.68□□□□□ -2.3
RNU4-28P-201ENST00000364739 SLC35G5Q96KT7 338 aa0.68□□□□□ -2.3
RNU4-28P-201ENST00000364739 MIEN1Q9BRT3 115 aa0.68□□□□□ -2.3
RNU4-28P-201ENST00000364739 PRRG3Q9BZD7 231 aa0.68□□□□□ -2.3
RNU4-28P-201ENST00000364739 CYSTM1Q9H1C7 97 aa0.68□□□□□ -2.3
RNU4-28P-201ENST00000364739 SNX24Q9Y343 169 aa0.68□□□□□ -2.3
RNU4-28P-201ENST00000364739 BRWD1Q9NSI6 2320 aa0.67□□□□□ -2.3
RNU4-28P-201ENST00000364739 OR5K4A6NMS3 321 aa0.67□□□□□ -2.3
RNU4-28P-201ENST00000364739 SLC17A3O00476 420 aa0.67□□□□□ -2.3
RNU4-28P-201ENST00000364739 GPR171O14626 319 aa0.67□□□□□ -2.3
RNU4-28P-201ENST00000364739 IDH3GP51553 393 aaPredicted RBP0.67□□□□□ -2.3
RNU4-28P-201ENST00000364739 XIAPP98170 497 aa0.67□□□□□ -2.3
RNU4-28P-201ENST00000364739 RELAQ04206 551 aa0.67□□□□□ -2.3
RNU4-28P-201ENST00000364739 TMEM155Q4W5P6 130 aa0.67□□□□□ -2.3
RNU4-28P-201ENST00000364739 AHSA2Q719I0 299 aa0.67□□□□□ -2.3
RNU4-28P-201ENST00000364739 RNF133Q8WVZ7 376 aa0.67□□□□□ -2.3
RNU4-28P-201ENST00000364739 IFT81Q8WYA0 676 aa0.67□□□□□ -2.3
RNU4-28P-201ENST00000364739 LRRC39Q96DD0 335 aa0.67□□□□□ -2.3
RNU4-28P-201ENST00000364739 STK38LQ9Y2H1 464 aa0.67□□□□□ -2.3
RNU4-28P-201ENST00000364739 RBMX2Q9Y388 322 aaKnown RBP0.67□□□□□ -2.3
RNU4-28P-201ENST00000364739 GRIFINA4D1Z8 144 aa0.66□□□□□ -2.3
RNU4-28P-201ENST00000364739 GOLGA8IPA6NC78 632 aa0.66□□□□□ -2.3
RNU4-28P-201ENST00000364739 OR11H12B2RN74 326 aa0.66□□□□□ -2.3
RNU4-28P-201ENST00000364739 ZNF737O75373 536 aa0.66□□□□□ -2.3
RNU4-28P-201ENST00000364739 OTCP00480 354 aa0.66□□□□□ -2.3
RNU4-28P-201ENST00000364739 BPGMP07738 259 aa0.66□□□□□ -2.3
RNU4-28P-201ENST00000364739 GPX2P18283 190 aa0.66□□□□□ -2.3
RNU4-28P-201ENST00000364739 ATF1P18846 271 aa0.66□□□□□ -2.3
RNU4-28P-201ENST00000364739 NPPCP23582 126 aa0.66□□□□□ -2.3
RNU4-28P-201ENST00000364739 RCVRNP35243 200 aa0.66□□□□□ -2.3
RNU4-28P-201ENST00000364739 OR10A3P58181 314 aa0.66□□□□□ -2.3
RNU4-28P-201ENST00000364739 FGF12P61328 243 aa0.66□□□□□ -2.3
RNU4-28P-201ENST00000364739 OR10J3Q5JRS4 329 aa0.66□□□□□ -2.3
RNU4-28P-201ENST00000364739 SLC35E3Q7Z769 313 aa0.66□□□□□ -2.3
RNU4-28P-201ENST00000364739 LHFPL1Q86WI0 220 aa0.66□□□□□ -2.3
RNU4-28P-201ENST00000364739 OR2Y1Q8NGV0 311 aa0.66□□□□□ -2.3
RNU4-28P-201ENST00000364739 OR11H2Q8NH07 326 aa0.66□□□□□ -2.3
RNU4-28P-201ENST00000364739 MITD1Q8WV92 249 aa0.66□□□□□ -2.3
RNU4-28P-201ENST00000364739 CLUHO75153 1309 aa0.65□□□□□ -2.3
RNU4-28P-201ENST00000364739 EFCAB9A8MZ26 197 aa0.65□□□□□ -2.31
RNU4-28P-201ENST00000364739 CSTAP01040 98 aa0.65□□□□□ -2.31
RNU4-28P-201ENST00000364739 CDK2P24941 298 aa0.65□□□□□ -2.31
RNU4-28P-201ENST00000364739 XCL1P47992 114 aa0.65□□□□□ -2.31
RNU4-28P-201ENST00000364739 LINC00313P59037 77 aa0.65□□□□□ -2.31
RNU4-28P-201ENST00000364739 NNATQ16517 81 aa0.65□□□□□ -2.31
RNU4-28P-201ENST00000364739 BSXQ3C1V8 233 aa0.65□□□□□ -2.31
RNU4-28P-201ENST00000364739 HSP90B2PQ58FF3 399 aa0.65□□□□□ -2.31
RNU4-28P-201ENST00000364739 UNQ6190/PRO20217Q6UXQ8 127 aa0.65□□□□□ -2.31
RNU4-28P-201ENST00000364739 CNEP1R1Q8N9A8 125 aa0.65□□□□□ -2.31
RNU4-28P-201ENST00000364739 ACBD4Q8NC06 268 aa0.65□□□□□ -2.31
RNU4-28P-201ENST00000364739 OR5J2Q8NH18 312 aa0.65□□□□□ -2.31
RNU4-28P-201ENST00000364739 FAM215AQ9Y5M1 114 aa0.65□□□□□ -2.31
RNU4-28P-201ENST00000364739 IGKV3-7A0A075B6H7 116 aa0.64□□□□□ -2.31
RNU4-28P-201ENST00000364739 RAB19A4D1S5 217 aa0.64□□□□□ -2.31
RNU4-28P-201ENST00000364739 ATP6V0CP27449 155 aa0.64□□□□□ -2.31
RNU4-28P-201ENST00000364739 TMEM258P61165 79 aa0.64□□□□□ -2.31
RNU4-28P-201ENST00000364739 GTF2BQ00403 316 aa0.64□□□□□ -2.31
RNU4-28P-201ENST00000364739 VAMP3Q15836 100 aa0.64□□□□□ -2.31
RNU4-28P-201ENST00000364739 PABPC1L2AQ5JQF8 200 aa0.64□□□□□ -2.31
RNU4-28P-201ENST00000364739 CCDC112Q8NEF3 446 aa0.64□□□□□ -2.31
RNU4-28P-201ENST00000364739 ACBD6Q9BR61 282 aa0.64□□□□□ -2.31
RNU4-28P-201ENST00000364739 CHST5Q9GZS9 411 aa0.64□□□□□ -2.31
RNU4-28P-201ENST00000364739 MED28Q9H204 178 aa0.64□□□□□ -2.31
RNU4-28P-201ENST00000364739 GOLPH3Q9H4A6 298 aa0.64□□□□□ -2.31
RNU4-28P-201ENST00000364739 TMEM216Q9P0N5 145 aa0.64□□□□□ -2.31
RNU4-28P-201ENST00000364739 HHLA2Q9UM44 414 aa0.64□□□□□ -2.31
RNU4-28P-201ENST00000364739 HHLA3Q9XRX5 114 aa0.64□□□□□ -2.31
RNU4-28P-201ENST00000364739 NCOA6Q14686 2063 aaPredicted RBP0.63□□□□□ -2.31
RNU4-28P-201ENST00000364739 CRXO43186 299 aaPredicted RBP0.63□□□□□ -2.31
RNU4-28P-201ENST00000364739 IGHV1-69P01742 117 aa0.63□□□□□ -2.31
RNU4-28P-201ENST00000364739 DAPP51397 102 aa0.63□□□□□ -2.31
RNU4-28P-201ENST00000364739 XKRXQ6PP77 449 aa0.63□□□□□ -2.31
RNU4-28P-201ENST00000364739 DRAM2Q6UX65 266 aa0.63□□□□□ -2.31
RNU4-28P-201ENST00000364739 ABHD14BQ96IU4 210 aa0.63□□□□□ -2.31
RNU4-28P-201ENST00000364739 MAT2BQ9NZL9 334 aa0.63□□□□□ -2.31
RNU4-28P-201ENST00000364739 LINC00527Q9UJ94 153 aa0.63□□□□□ -2.31
RNU4-28P-201ENST00000364739 KLK5Q9Y337 293 aaPredicted RBP0.63□□□□□ -2.31
RNU4-28P-201ENST00000364739 TRGV5A0A0B4J1U4 118 aa0.62□□□□□ -2.31
RNU4-28P-201ENST00000364739 A0A1W2PQD3 144 aa0.62□□□□□ -2.31
RNU4-28P-201ENST00000364739 M0QYV0 167 aa0.62□□□□□ -2.31
RNU4-28P-201ENST00000364739 PHYHO14832 338 aa0.62□□□□□ -2.31
RNU4-28P-201ENST00000364739 CYTH3O43739 400 aa0.62□□□□□ -2.31
RNU4-28P-201ENST00000364739 CRYBA1P05813 215 aa0.62□□□□□ -2.31
RNU4-28P-201ENST00000364739 OR13C7P0DN81 318 aa0.62□□□□□ -2.31
RNU4-28P-201ENST00000364739 OPRM1P35372 400 aa0.62□□□□□ -2.31
RNU4-28P-201ENST00000364739 OR1E2P47887 323 aa0.62□□□□□ -2.31
RNU4-28P-201ENST00000364739 FAM3AP98173 230 aa0.62□□□□□ -2.31
RNU4-28P-201ENST00000364739 HOXC5Q00444 222 aa0.62□□□□□ -2.31
RNU4-28P-201ENST00000364739 GLO1Q04760 184 aa0.62□□□□□ -2.31
RNU4-28P-201ENST00000364739 PLCXD2Q0VAA5 305 aa0.62□□□□□ -2.31
RNU4-28P-201ENST00000364739 XRCC4Q13426 336 aa0.62□□□□□ -2.31
RNU4-28P-201ENST00000364739 SLC36A2Q495M3 483 aa0.62□□□□□ -2.31
RNU4-28P-201ENST00000364739 MTERF4Q7Z6M4 381 aaKnown RBP0.62□□□□□ -2.31
RNU4-28P-201ENST00000364739 METTL8Q9H825 291 aaKnown RBP0.62□□□□□ -2.31
RNU4-28P-201ENST00000364739 PTPRSQ13332 1948 aa0.62□□□□□ -2.31
RNU4-28P-201ENST00000364739 CACNA1BQ00975 2339 aa0.61□□□□□ -2.31
RNU4-28P-201ENST00000364739 STK16O75716 305 aa0.61□□□□□ -2.31
RNU4-28P-201ENST00000364739 SNAP29O95721 258 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms