RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 FMODQ06828 376 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 ARL16Q0P5N6 197 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 ACSF3Q4G176 576 aaPredicted RBP8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 UFSP1Q6NVU6 142 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 NEGR1Q7Z3B1 354 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 SIRPB1O00241 398 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 SIVA1O15304 175 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 NRASP01111 189 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 KRASP01116 189 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 OR10J4P0C629 311 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 IL12BP29460 328 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 PSMB3P49720 205 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 FABP6P51161 128 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 YPEL3P61236 119 aaPredicted RBP8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 RPS16P62249 146 aaKnown RBP8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 HSD52Q0P140 79 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 DUSP28Q4G0W2 176 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 ASPHD1Q5U4P2 390 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 EBLN2Q6P2I7 272 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 C22orf39Q6P5X5 142 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 RPP25LQ8N5L8 163 aaKnown RBP8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 LRRC75AQ8NAA5 344 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 VN1R2Q8NFZ6 395 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 NEU4Q8WWR8 484 aaPredicted RBP8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 WDR61Q9GZS3 305 aaKnown RBP8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 OR10A2Q9H208 303 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 R4GMQ9 66 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 H0Y8G0 127 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 NDUFB4O95168 129 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 WISP1O95388 367 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 PGCP20142 388 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 COL8A2P25067 703 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 SRIP30626 198 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 ATP5G3P48201 142 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 PMCHL1Q16048 86 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 RSPO4Q2I0M5 234 aaPredicted RBP8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 CHRDL2Q6WN34 429 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 LINC00114Q6XXX2 140 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 GTF2H5Q6ZYL4 71 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 SCGB1C1Q8TD33 95 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 ZNF764Q96H86 408 aaPredicted RBP8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 NPFFR1Q9GZQ6 430 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 SERTAD4Q9NUC0 356 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 PLEKHJ1Q9NW61 149 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 DAPP1Q9UN19 280 aa8.24□□□□□ -1.09
PTCHD4-201ENST00000339488 GAGE12HA6NDE8 117 aa8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 ZNF840PA6NDX5 716 aa8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 J3KRW8 73 aa8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 CLDN1O95832 211 aa8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 HNRNPA1P09651 372 aaKnown RBP eCLIP8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 CYBAP13498 195 aa8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 TCL1AP56279 114 aa8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 ATP5G2Q06055 141 aa8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 LTC4SQ16873 150 aa8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 OR51E1Q8TCB6 317 aa8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 MBD3L1Q8WWY6 194 aa8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 IL23AQ9NPF7 189 aa8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 NAT8BQ9UHF3 227 aa8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 COA3Q9Y2R0 106 aaPredicted RBP8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 SH2D7A6NKC9 451 aaPredicted RBP8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 CLEC3BP05452 202 aa8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 ERGP11308 486 aa8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 SLC25A6P12236 298 aa8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 HTD2P86397 168 aa8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 RAB30Q15771 203 aa8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 DEFB134Q4QY38 66 aa8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 SLC39A11Q8N1S5 342 aa8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 OR52N5Q8NH56 324 aa8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 TSKUQ8WUA8 353 aa8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 TMEM45BQ96B21 275 aa8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 SPSB1Q96BD6 273 aa8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 PMCHL2Q9BQD1 86 aa8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 APOOQ9BUR5 198 aa8.23□□□□□ -1.09
PTCHD4-201ENST00000339488 DIDO1Q9BTC0 2240 aaKnown RBP8.22□□□□□ -1.09
PTCHD4-201ENST00000339488 TRBV20OR9-2A0A075B6H5 130 aa8.22□□□□□ -1.09
PTCHD4-201ENST00000339488 UBE2L5PA0A1B0GUS4 154 aa8.22□□□□□ -1.09
PTCHD4-201ENST00000339488 MDFIC2A0A1B0GVS7 189 aa8.22□□□□□ -1.09
PTCHD4-201ENST00000339488 SHISA8B8ZZ34 492 aa8.22□□□□□ -1.09
PTCHD4-201ENST00000339488 CEBPBP17676 345 aa8.22□□□□□ -1.09
PTCHD4-201ENST00000339488 VDAC1P21796 283 aa8.22□□□□□ -1.09
PTCHD4-201ENST00000339488 CD1BP29016 333 aa8.22□□□□□ -1.09
PTCHD4-201ENST00000339488 CEBPDP49716 269 aaPredicted RBP8.22□□□□□ -1.09
PTCHD4-201ENST00000339488 PAX9P55771 341 aa8.22□□□□□ -1.09
PTCHD4-201ENST00000339488 GNB1P62873 340 aa8.22□□□□□ -1.09
PTCHD4-201ENST00000339488 PDCD1Q15116 288 aa8.22□□□□□ -1.09
PTCHD4-201ENST00000339488 ZNF658BQ4V348 819 aaPredicted RBP8.22□□□□□ -1.09
PTCHD4-201ENST00000339488 SMIM20Q8N5G0 67 aa8.22□□□□□ -1.09
PTCHD4-201ENST00000339488 ZNF439Q8NDP4 499 aa8.22□□□□□ -1.09
PTCHD4-201ENST00000339488 OR2V2Q96R30 315 aa8.22□□□□□ -1.09
PTCHD4-201ENST00000339488 PSG8Q9UQ74 426 aa8.22□□□□□ -1.09
PTCHD4-201ENST00000339488 MED12LQ86YW9 2145 aa8.22□□□□□ -1.09
PTCHD4-201ENST00000339488 CDIPTO14735 213 aa8.22□□□□□ -1.09
PTCHD4-201ENST00000339488 MLNRO43193 412 aa8.22□□□□□ -1.09
PTCHD4-201ENST00000339488 LIPFP07098 398 aa8.22□□□□□ -1.09
PTCHD4-201ENST00000339488 PSEN2P49810 448 aa8.22□□□□□ -1.09
PTCHD4-201ENST00000339488 ZNF776Q68DI1 518 aaPredicted RBP8.22□□□□□ -1.09
PTCHD4-201ENST00000339488 ZNF324BQ6AW86 544 aaPredicted RBP8.22□□□□□ -1.09
PTCHD4-201ENST00000339488 DGAT2L6Q6ZPD8 337 aa8.22□□□□□ -1.09
PTCHD4-201ENST00000339488 WDFY3Q8IZQ1 3526 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms