RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 PPP1CBP62140 327 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 DAZAP2Q15038 168 aaPredicted RBP10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 ZNF324BQ6AW86 544 aaPredicted RBP10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 DRAM1Q8N682 238 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 SLC25A40Q8TBP6 338 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 RHOVQ96L33 236 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 POLDIP2Q9Y2S7 368 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 PKDREJQ9NTG1 2253 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 LOC102723971A0A1B0GUV8 181 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 KLRC4-KLRK1H3BQV0 150 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 H7BYZ3 331 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 TRGC1P0CF51 173 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 MPLP40238 635 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 UBALD2Q8IYN6 164 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 ABHD14BQ96IU4 210 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 MSL2Q9HCI7 577 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 TIMM8AO60220 97 aaPredicted RBP10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 HIST1H2BKO60814 126 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 IGKV1-5P01602 117 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 HIST1H2BJP06899 126 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 CD46P15529 392 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 EGR1P18146 543 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 HIST1H2BOP23527 126 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 HIST1H2BBP33778 126 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 HIST1H2BDP58876 126 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 HIST1H2BCP62807 126 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 TGFBR3Q03167 851 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 MSMO1Q15800 293 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 HIST2H2BEQ16778 126 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 H1FOOQ8IZA3 346 aaPredicted RBP10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 HIST1H2BHQ93079 126 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 HIST1H2BNQ99877 126 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 HIST1H2BMQ99879 126 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 GFOD1Q9NXC2 390 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 DSPP15924 2871 aaKnown RBP10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 DUXBA0A1W2PPF3 345 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 B4E171 279 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 C9orf172C9J069 976 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 RAMP3O60896 148 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 TNFSF15O95150 251 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 TSPAN7P41732 249 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 PSMB3P49720 205 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 RTP5Q14D33 572 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 USF2Q15853 346 aaPredicted RBP10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 Q3ZCU0 254 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 PRAMEF6Q5VXH4 476 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 COLCA1Q6ZS62 124 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 TMEM37Q8WXS4 190 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 FRZBQ92765 325 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 GALMQ96C23 342 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 DUSP13Q9UII6 198 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 CHD3Q12873 2000 aaKnown RBP10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 OR5H1A6NKK0 313 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 GLIPR1P48060 266 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 PYY3Q5JQD4 70 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 FFAR4Q5NUL3 377 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 VHLLQ6RSH7 139 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 H2BFWTQ7Z2G1 175 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 ZNF525Q8N782 197 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 ZDHHC16Q969W1 377 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 TMEM45BQ96B21 275 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 GNG12Q9UBI6 72 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 WASF3Q9UPY6 502 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 PSG11Q9UQ72 335 aa10.92□□□□□ -0.66
HMGCS1-201ENST00000325110 NCKAP5O14513 1909 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 TRGV5A0A0B4J1U4 118 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 IGKV1-39P01597 117 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 IGHV2-5P01817 119 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 IGKV1D-39P04432 117 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 PAX6P26367 422 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 CDX1P47902 265 aaPredicted RBP10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 CATR1Q13166 79 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 OR10P1Q8NGE3 313 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 TRIB1Q96RU8 372 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 SMDT1Q9H4I9 107 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 RNF115Q9Y4L5 304 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 PHOX2AO14813 284 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 IFNA10P01566 189 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 CRYAAP02489 173 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 RNPS1Q15287 305 aaKnown RBP10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 FBXW9Q5XUX1 488 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 SSX7Q7RTT5 188 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 ODF3L1Q8IXM7 274 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 SAXO1Q8IYX7 474 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 GATAD1Q8WUU5 269 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 TAF15Q92804 592 aaKnown RBP eCLIP10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 TMEM204Q9BSN7 226 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 KLF13Q9Y2Y9 288 aaPredicted RBP10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 ST8SIA5O15466 376 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 HAND1O96004 215 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 CHRNA7P36544 502 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 SLC35E3Q7Z769 313 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 OR10G4Q8NGN3 311 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 OR10G9Q8NGN4 311 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 OR10G7Q8NGN6 311 aa10.91□□□□□ -0.66
HMGCS1-201ENST00000325110 ZG16O60844 167 aa10.9□□□□□ -0.66
HMGCS1-201ENST00000325110 S1PR2O95136 353 aa10.9□□□□□ -0.66
HMGCS1-201ENST00000325110 HOXA5P20719 270 aa10.9□□□□□ -0.66
HMGCS1-201ENST00000325110 CCL11P51671 97 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms