RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 Q8N6K4 173 aa12.71□□□□□ -0.37
HDDC2-201ENST00000318787 OR10R2Q8NGX6 335 aa12.71□□□□□ -0.37
HDDC2-201ENST00000318787 MAFIPQ8WZ33 124 aa12.71□□□□□ -0.37
HDDC2-201ENST00000318787 IFI27L2Q9H2X8 130 aa12.71□□□□□ -0.37
HDDC2-201ENST00000318787 LIN7CQ9NUP9 197 aaKnown RBP12.71□□□□□ -0.37
HDDC2-201ENST00000318787 DAPK2Q9UIK4 370 aa12.71□□□□□ -0.37
HDDC2-201ENST00000318787 MGAT4AQ9UM21 535 aa12.71□□□□□ -0.37
HDDC2-201ENST00000318787 METTL21EPA6NDL7 271 aa12.7□□□□□ -0.38
HDDC2-201ENST00000318787 NUDT19A8MXV4 375 aa12.7□□□□□ -0.38
HDDC2-201ENST00000318787 IGHG2P01859 326 aa12.7□□□□□ -0.38
HDDC2-201ENST00000318787 CD33P20138 364 aa12.7□□□□□ -0.38
HDDC2-201ENST00000318787 GALP22466 123 aa12.7□□□□□ -0.38
HDDC2-201ENST00000318787 GPR12P47775 334 aa12.7□□□□□ -0.38
HDDC2-201ENST00000318787 ARFRP1Q13795 201 aa12.7□□□□□ -0.38
HDDC2-201ENST00000318787 GLDNQ6ZMI3 551 aaPredicted RBP12.7□□□□□ -0.38
HDDC2-201ENST00000318787 NR2C2APQ86WQ0 139 aa12.7□□□□□ -0.38
HDDC2-201ENST00000318787 STPG2Q8N412 459 aa12.7□□□□□ -0.38
HDDC2-201ENST00000318787 NABP2Q9BQ15 211 aa12.7□□□□□ -0.38
HDDC2-201ENST00000318787 ZNF251Q9BRH9 671 aa12.7□□□□□ -0.38
HDDC2-201ENST00000318787 ABCG5Q9H222 651 aa12.7□□□□□ -0.38
HDDC2-201ENST00000318787 PIPOXQ9P0Z9 390 aa12.7□□□□□ -0.38
HDDC2-201ENST00000318787 RNF150Q9ULK6 438 aa12.7□□□□□ -0.38
HDDC2-201ENST00000318787 TRBV6-6A0A0A6YYG2 114 aa12.69□□□□□ -0.38
HDDC2-201ENST00000318787 H7C2Y5 167 aa12.69□□□□□ -0.38
HDDC2-201ENST00000318787 AP4M1O00189 453 aa12.69□□□□□ -0.38
HDDC2-201ENST00000318787 RAB29O14966 203 aa12.69□□□□□ -0.38
HDDC2-201ENST00000318787 BET1O15155 118 aa12.69□□□□□ -0.38
HDDC2-201ENST00000318787 CNTFRP26992 372 aa12.69□□□□□ -0.38
HDDC2-201ENST00000318787 TALDO1P37837 337 aa12.69□□□□□ -0.38
HDDC2-201ENST00000318787 ACTBP60709 375 aa12.69□□□□□ -0.38
HDDC2-201ENST00000318787 FAM131AQ6UXB0 335 aa12.69□□□□□ -0.38
HDDC2-201ENST00000318787 ZNF833PQ6ZTB9 187 aa12.69□□□□□ -0.38
HDDC2-201ENST00000318787 EDARADDQ8WWZ3 215 aa12.69□□□□□ -0.38
HDDC2-201ENST00000318787 HSPB9Q9BQS6 159 aa12.69□□□□□ -0.38
HDDC2-201ENST00000318787 RNF167Q9H6Y7 350 aa12.69□□□□□ -0.38
HDDC2-201ENST00000318787 ZNF230Q9UIE0 474 aaPredicted RBP12.69□□□□□ -0.38
HDDC2-201ENST00000318787 NOTOA8MTQ0 251 aa12.69□□□□□ -0.38
HDDC2-201ENST00000318787 TRDCB7Z8K6 153 aa12.69□□□□□ -0.38
HDDC2-201ENST00000318787 FCGR3AP08637 254 aa12.69□□□□□ -0.38
HDDC2-201ENST00000318787 CD36P16671 472 aa12.69□□□□□ -0.38
HDDC2-201ENST00000318787 RAB6AP20340 208 aa12.69□□□□□ -0.38
HDDC2-201ENST00000318787 FGF9P31371 208 aaPredicted RBP12.69□□□□□ -0.38
HDDC2-201ENST00000318787 SOX6P35712 828 aa12.69□□□□□ -0.38
HDDC2-201ENST00000318787 OXLD1Q5BKU9 147 aa12.69□□□□□ -0.38
HDDC2-201ENST00000318787 DRAXINQ8NBI3 349 aaPredicted RBP12.69□□□□□ -0.38
HDDC2-201ENST00000318787 OR8H1Q8NGG4 311 aa12.69□□□□□ -0.38
HDDC2-201ENST00000318787 KCTD7Q96MP8 289 aa12.69□□□□□ -0.38
HDDC2-201ENST00000318787 C11orf54Q9H0W9 315 aaPredicted RBP12.69□□□□□ -0.38
HDDC2-201ENST00000318787 PLSCR3Q9NRY6 295 aa12.69□□□□□ -0.38
HDDC2-201ENST00000318787 KIAA1456Q9P272 454 aa12.69□□□□□ -0.38
HDDC2-201ENST00000318787 ZNF107Q9UII5 783 aaPredicted RBP12.69□□□□□ -0.38
HDDC2-201ENST00000318787 KCNK7Q9Y2U2 307 aa12.69□□□□□ -0.38
HDDC2-201ENST00000318787 FABP7O15540 132 aa12.68□□□□□ -0.38
HDDC2-201ENST00000318787 RRP9O43818 475 aaKnown RBP12.68□□□□□ -0.38
HDDC2-201ENST00000318787 PRB2P02812 416 aaPredicted RBP12.68□□□□□ -0.38
HDDC2-201ENST00000318787 SNRPBP14678 240 aaKnown RBP12.68□□□□□ -0.38
HDDC2-201ENST00000318787 HIST1H1DP16402 221 aaKnown RBP12.68□□□□□ -0.38
HDDC2-201ENST00000318787 SDC2P34741 201 aa12.68□□□□□ -0.38
HDDC2-201ENST00000318787 PLGLAQ15195 96 aa12.68□□□□□ -0.38
HDDC2-201ENST00000318787 KCTD21Q4G0X4 260 aa12.68□□□□□ -0.38
HDDC2-201ENST00000318787 PDLIM3Q53GG5 364 aaPredicted RBP12.68□□□□□ -0.38
HDDC2-201ENST00000318787 LY6G6FQ5SQ64 297 aa12.68□□□□□ -0.38
HDDC2-201ENST00000318787 FAM71E2Q8N5Q1 922 aa12.68□□□□□ -0.38
HDDC2-201ENST00000318787 KLHL30-AS1Q8NEE0 82 aa12.68□□□□□ -0.38
HDDC2-201ENST00000318787 RITA1Q96K30 269 aa12.68□□□□□ -0.38
HDDC2-201ENST00000318787 RDH8Q9NYR8 311 aa12.68□□□□□ -0.38
HDDC2-201ENST00000318787 ZNF221Q9UK13 617 aa12.68□□□□□ -0.38
HDDC2-201ENST00000318787 RBM7Q9Y580 266 aaKnown RBP12.68□□□□□ -0.38
HDDC2-201ENST00000318787 RAB27BO00194 218 aa12.67□□□□□ -0.38
HDDC2-201ENST00000318787 MFNGO00587 321 aa12.67□□□□□ -0.38
HDDC2-201ENST00000318787 NBR2O15453 112 aa12.67□□□□□ -0.38
HDDC2-201ENST00000318787 GSTP1P09211 210 aaKnown RBP12.67□□□□□ -0.38
HDDC2-201ENST00000318787 CLEC2LP0C7M8 214 aa12.67□□□□□ -0.38
HDDC2-201ENST00000318787 GSTT2P0CG29 244 aa12.67□□□□□ -0.38
HDDC2-201ENST00000318787 GSTT2BP0CG30 244 aa12.67□□□□□ -0.38
HDDC2-201ENST00000318787 VDAC1P21796 283 aa12.67□□□□□ -0.38
HDDC2-201ENST00000318787 IGSF11Q5DX21 431 aa12.67□□□□□ -0.38
HDDC2-201ENST00000318787 SFXN4Q6P4A7 337 aa12.67□□□□□ -0.38
HDDC2-201ENST00000318787 LCNL1Q6ZST4 164 aa12.67□□□□□ -0.38
HDDC2-201ENST00000318787 C18orf65Q6ZTR6 163 aa12.67□□□□□ -0.38
HDDC2-201ENST00000318787 TPRA1Q86W33 373 aa12.67□□□□□ -0.38
HDDC2-201ENST00000318787 OR4A4PQ8NGN8 299 aa12.67□□□□□ -0.38
HDDC2-201ENST00000318787 LGALS14Q8TCE9 139 aa12.67□□□□□ -0.38
HDDC2-201ENST00000318787 PHF21AQ96BD5 680 aa12.67□□□□□ -0.38
HDDC2-201ENST00000318787 GINS4Q9BRT9 223 aa12.67□□□□□ -0.38
HDDC2-201ENST00000318787 GON7Q9BXV9 100 aa12.67□□□□□ -0.38
HDDC2-201ENST00000318787 PARP11Q9NR21 331 aa12.67□□□□□ -0.38
HDDC2-201ENST00000318787 ELF5Q9UKW6 265 aaPredicted RBP12.67□□□□□ -0.38
HDDC2-201ENST00000318787 IGKV1-6A0A0C4DH72 117 aa12.66□□□□□ -0.38
HDDC2-201ENST00000318787 RPL23AP62750 156 aaKnown RBP12.66□□□□□ -0.38
HDDC2-201ENST00000318787 KIR2DS1Q14954 304 aa12.66□□□□□ -0.38
HDDC2-201ENST00000318787 IDNKQ5T6J7 187 aa12.66□□□□□ -0.38
HDDC2-201ENST00000318787 FAM71F2Q6NXP2 309 aa12.66□□□□□ -0.38
HDDC2-201ENST00000318787 TEX38Q6PEX7 206 aa12.66□□□□□ -0.38
HDDC2-201ENST00000318787 C8orf86Q6ZUL3 223 aa12.66□□□□□ -0.38
HDDC2-201ENST00000318787 OR10J5Q8NHC4 309 aa12.66□□□□□ -0.38
HDDC2-201ENST00000318787 ABHD5Q8WTS1 349 aa12.66□□□□□ -0.38
HDDC2-201ENST00000318787 VCX3AQ9NNX9 186 aa12.66□□□□□ -0.38
HDDC2-201ENST00000318787 PRKDCP78527 4128 aaKnown RBP12.65□□□□□ -0.38
HDDC2-201ENST00000318787 CT45A6P0DMU7 189 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 192.6 ms