RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 TRAT1Q6PIZ9 186 aa12.23□□□□□ -0.45
FOXR1-201ENST00000317011 FAM71E2Q8N5Q1 922 aa12.23□□□□□ -0.45
FOXR1-201ENST00000317011 OR1L1Q8NH94 360 aa12.23□□□□□ -0.45
FOXR1-201ENST00000317011 NEK7Q8TDX7 302 aa12.23□□□□□ -0.45
FOXR1-201ENST00000317011 S1PR3Q99500 378 aa12.23□□□□□ -0.45
FOXR1-201ENST00000317011 SELENOIQ9C0D9 397 aa12.23□□□□□ -0.45
FOXR1-201ENST00000317011 CST11Q9H112 138 aa12.23□□□□□ -0.45
FOXR1-201ENST00000317011 RAB9BQ9NP90 201 aa12.23□□□□□ -0.45
FOXR1-201ENST00000317011 CCDC59Q9P031 241 aaKnown RBP12.23□□□□□ -0.45
FOXR1-201ENST00000317011 ZNF580Q9UK33 172 aa12.23□□□□□ -0.45
FOXR1-201ENST00000317011 TMEM272A0A1B0GTI8 110 aa12.22□□□□□ -0.45
FOXR1-201ENST00000317011 AP4M1O00189 453 aa12.22□□□□□ -0.45
FOXR1-201ENST00000317011 TXNL1O43396 289 aa12.22□□□□□ -0.45
FOXR1-201ENST00000317011 LANCL1O43813 399 aa12.22□□□□□ -0.45
FOXR1-201ENST00000317011 MPIG6BO95866 241 aa12.22□□□□□ -0.45
FOXR1-201ENST00000317011 F2RL1P55085 397 aa12.22□□□□□ -0.45
FOXR1-201ENST00000317011 SLC35B1P78383 322 aa12.22□□□□□ -0.45
FOXR1-201ENST00000317011 HTD2P86397 168 aa12.22□□□□□ -0.45
FOXR1-201ENST00000317011 CFHR3Q02985 330 aa12.22□□□□□ -0.45
FOXR1-201ENST00000317011 PLA2G7Q13093 441 aa12.22□□□□□ -0.45
FOXR1-201ENST00000317011 UNC119Q13432 240 aa12.22□□□□□ -0.45
FOXR1-201ENST00000317011 C2orf76Q3KRA6 126 aa12.22□□□□□ -0.45
FOXR1-201ENST00000317011 TEX38Q6PEX7 206 aa12.22□□□□□ -0.45
FOXR1-201ENST00000317011 FOXRED2Q8IWF2 684 aa12.22□□□□□ -0.45
FOXR1-201ENST00000317011 ODF3L1Q8IXM7 274 aa12.22□□□□□ -0.45
FOXR1-201ENST00000317011 MRPL30Q8TCC3 161 aaKnown RBP12.22□□□□□ -0.45
FOXR1-201ENST00000317011 TAF9BQ9HBM6 251 aa12.22□□□□□ -0.45
FOXR1-201ENST00000317011 NCBP2LA6PVI3 153 aaKnown RBP12.21□□□□□ -0.45
FOXR1-201ENST00000317011 PDCD6O75340 191 aa12.21□□□□□ -0.45
FOXR1-201ENST00000317011 RANBP1P43487 201 aa12.21□□□□□ -0.45
FOXR1-201ENST00000317011 QRFPP83859 136 aa12.21□□□□□ -0.45
FOXR1-201ENST00000317011 OR5H6Q8NGV6 325 aa12.21□□□□□ -0.45
FOXR1-201ENST00000317011 KCNG3Q8TAE7 436 aa12.21□□□□□ -0.45
FOXR1-201ENST00000317011 AP3S1Q92572 193 aa12.21□□□□□ -0.45
FOXR1-201ENST00000317011 TMEM59Q9BXS4 323 aa12.21□□□□□ -0.45
FOXR1-201ENST00000317011 ABRACLQ9P1F3 81 aa12.21□□□□□ -0.45
FOXR1-201ENST00000317011 GNG12Q9UBI6 72 aa12.21□□□□□ -0.45
FOXR1-201ENST00000317011 WI2-2373I1.2A0A1W2PRP0 233 aa12.2□□□□□ -0.46
FOXR1-201ENST00000317011 UBE2QL1A1L167 161 aa12.2□□□□□ -0.46
FOXR1-201ENST00000317011 TMEM14DPA8MWL7 114 aa12.2□□□□□ -0.46
FOXR1-201ENST00000317011 LDLRAD4O15165 306 aa12.2□□□□□ -0.46
FOXR1-201ENST00000317011 YPEL1O60688 119 aa12.2□□□□□ -0.46
FOXR1-201ENST00000317011 IGF1P05019 195 aa12.2□□□□□ -0.46
FOXR1-201ENST00000317011 ELANEP08246 267 aa12.2□□□□□ -0.46
FOXR1-201ENST00000317011 CDX1P47902 265 aaPredicted RBP12.2□□□□□ -0.46
FOXR1-201ENST00000317011 FOXE3Q13461 319 aa12.2□□□□□ -0.46
FOXR1-201ENST00000317011 KIR2DS1Q14954 304 aa12.2□□□□□ -0.46
FOXR1-201ENST00000317011 KHDC1LQ5JSQ8 128 aa12.2□□□□□ -0.46
FOXR1-201ENST00000317011 C8orf86Q6ZUL3 223 aa12.2□□□□□ -0.46
FOXR1-201ENST00000317011 C5orf24Q7Z6I8 188 aa12.2□□□□□ -0.46
FOXR1-201ENST00000317011 ZNF695Q8IW36 515 aa12.2□□□□□ -0.46
FOXR1-201ENST00000317011 OR10V1Q8NGI7 309 aa12.2□□□□□ -0.46
FOXR1-201ENST00000317011 KCTD12Q96CX2 325 aaKnown RBP12.2□□□□□ -0.46
FOXR1-201ENST00000317011 YPEL2Q96QA6 119 aa12.2□□□□□ -0.46
FOXR1-201ENST00000317011 MCRIP2Q9BUT9 160 aaKnown RBP12.2□□□□□ -0.46
FOXR1-201ENST00000317011 GON7Q9BXV9 100 aa12.2□□□□□ -0.46
FOXR1-201ENST00000317011 GPR61Q9BZJ8 451 aa12.2□□□□□ -0.46
FOXR1-201ENST00000317011 OR2S2Q9NQN1 319 aa12.2□□□□□ -0.46
FOXR1-201ENST00000317011 COMMD3Q9UBI1 195 aa12.2□□□□□ -0.46
FOXR1-201ENST00000317011 TMEM127O75204 238 aa12.19□□□□□ -0.46
FOXR1-201ENST00000317011 IGHG4P01861 327 aa12.19□□□□□ -0.46
FOXR1-201ENST00000317011 CHATP28329 748 aa12.19□□□□□ -0.46
FOXR1-201ENST00000317011 RPS27AP62979 156 aaKnown RBP12.19□□□□□ -0.46
FOXR1-201ENST00000317011 CNPY1Q3B7I2 92 aa12.19□□□□□ -0.46
FOXR1-201ENST00000317011 ZNF880Q6PDB4 577 aa12.19□□□□□ -0.46
FOXR1-201ENST00000317011 SAMD12Q8N8I0 201 aa12.19□□□□□ -0.46
FOXR1-201ENST00000317011 OR52L2PQ8NGH6 319 aa12.19□□□□□ -0.46
FOXR1-201ENST00000317011 ACOT12Q8WYK0 555 aa12.19□□□□□ -0.46
FOXR1-201ENST00000317011 RBMXL1Q96E39 390 aaKnown RBP12.19□□□□□ -0.46
FOXR1-201ENST00000317011 RAX2Q96IS3 184 aa12.19□□□□□ -0.46
FOXR1-201ENST00000317011 RASL11BQ9BPW5 248 aa12.19□□□□□ -0.46
FOXR1-201ENST00000317011 HSPB9Q9BQS6 159 aa12.19□□□□□ -0.46
FOXR1-201ENST00000317011 NICN1Q9BSH3 213 aa12.19□□□□□ -0.46
FOXR1-201ENST00000317011 TM2D1Q9BX74 207 aa12.19□□□□□ -0.46
FOXR1-201ENST00000317011 SLIRPQ9GZT3 109 aaKnown RBP12.19□□□□□ -0.46
FOXR1-201ENST00000317011 JPT1Q9UK76 154 aa12.19□□□□□ -0.46
FOXR1-201ENST00000317011 ETV7Q9Y603 341 aa12.19□□□□□ -0.46
FOXR1-201ENST00000317011 RPLP1P05386 114 aaKnown RBP12.18□□□□□ -0.46
FOXR1-201ENST00000317011 RAB6AP20340 208 aa12.18□□□□□ -0.46
FOXR1-201ENST00000317011 SCAND1P57086 179 aa12.18□□□□□ -0.46
FOXR1-201ENST00000317011 LSAMPQ13449 338 aa12.18□□□□□ -0.46
FOXR1-201ENST00000317011 KIAA0141Q14154 515 aaPredicted RBP12.18□□□□□ -0.46
FOXR1-201ENST00000317011 HMGN3Q15651 99 aa12.18□□□□□ -0.46
FOXR1-201ENST00000317011 MZT2AQ6P582 158 aa12.18□□□□□ -0.46
FOXR1-201ENST00000317011 MCFD2Q8NI22 146 aa12.18□□□□□ -0.46
FOXR1-201ENST00000317011 MYOZ3Q8TDC0 251 aa12.18□□□□□ -0.46
FOXR1-201ENST00000317011 SLC25A38Q96DW6 304 aa12.18□□□□□ -0.46
FOXR1-201ENST00000317011 RITA1Q96K30 269 aa12.18□□□□□ -0.46
FOXR1-201ENST00000317011 SULT4A1Q9BR01 284 aa12.18□□□□□ -0.46
FOXR1-201ENST00000317011 C6orf62Q9GZU0 229 aaPredicted RBP12.18□□□□□ -0.46
FOXR1-201ENST00000317011 LPAR5Q9H1C0 372 aa12.18□□□□□ -0.46
FOXR1-201ENST00000317011 RHBDL2Q9NX52 303 aa12.18□□□□□ -0.46
FOXR1-201ENST00000317011 KCNIP1Q9NZI2 227 aa12.18□□□□□ -0.46
FOXR1-201ENST00000317011 RAB22AQ9UL26 194 aa12.18□□□□□ -0.46
FOXR1-201ENST00000317011 SPATA2Q9UM82 520 aa12.18□□□□□ -0.46
FOXR1-201ENST00000317011 CCL24O00175 119 aa12.17□□□□□ -0.46
FOXR1-201ENST00000317011 HPGDSO60760 199 aa12.17□□□□□ -0.46
FOXR1-201ENST00000317011 NAPSAO96009 420 aa12.17□□□□□ -0.46
FOXR1-201ENST00000317011 PSMB8P28062 276 aa12.17□□□□□ -0.46
FOXR1-201ENST00000317011 PPIFP30405 207 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms