RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 TRAV1-1A0A0B4J248 108 aa13.78□□□□□ -0.2
TM9SF1-201ENST00000261789 TRAV20A0A0B4J274 112 aa13.78□□□□□ -0.2
TM9SF1-201ENST00000261789 MDH2P40926 338 aaKnown RBP13.78□□□□□ -0.2
TM9SF1-201ENST00000261789 OR3A1P47881 315 aa13.78□□□□□ -0.2
TM9SF1-201ENST00000261789 RPL30P62888 115 aaKnown RBP13.78□□□□□ -0.2
TM9SF1-201ENST00000261789 PSG7Q13046 419 aa13.78□□□□□ -0.2
TM9SF1-201ENST00000261789 LRRC75BQ2VPJ9 315 aa13.78□□□□□ -0.2
TM9SF1-201ENST00000261789 GFI1BQ5VTD9 330 aa13.78□□□□□ -0.2
TM9SF1-201ENST00000261789 CDPF1Q6NVV7 123 aa13.78□□□□□ -0.2
TM9SF1-201ENST00000261789 OR52L2PQ8NGH6 319 aa13.78□□□□□ -0.2
TM9SF1-201ENST00000261789 EDARADDQ8WWZ3 215 aa13.78□□□□□ -0.2
TM9SF1-201ENST00000261789 NANOS1Q8WY41 292 aaKnown RBP13.78□□□□□ -0.2
TM9SF1-201ENST00000261789 C5orf30Q96GV9 206 aa13.78□□□□□ -0.2
TM9SF1-201ENST00000261789 TCEAL7Q9BRU2 100 aa13.78□□□□□ -0.2
TM9SF1-201ENST00000261789 TRGV5A0A0B4J1U4 118 aa13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 CEBPZOSA8MTT3 80 aa13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 HIST1H2BKO60814 126 aa13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 TNFSF15O95150 251 aa13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 CLDN1O95832 211 aa13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 IGKV1D-33P01593 117 aa13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 IGKV1-33P01594 117 aa13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 HIST1H2BJP06899 126 aa13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 PGA5P0DJD9 388 aa13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 HOXA5P20719 270 aa13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 HIST1H2BOP23527 126 aa13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 HIST1H2BBP33778 126 aa13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 MPV17P39210 176 aa13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 HIST1H2BDP58876 126 aa13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 HIST1H2BCP62807 126 aa13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 AESQ08117 197 aa13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 HIST2H2BEQ16778 126 aa13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 BTNL3Q6UXE8 466 aa13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 TPRX1Q8N7U7 411 aa13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 CA5BP1Q8WTZ4 195 aa13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 HIST1H2BHQ93079 126 aa13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 HIST1H2BNQ99877 126 aa13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 HIST1H2BMQ99879 126 aa13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 GGACTQ9BVM4 153 aa13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 WDR61Q9GZS3 305 aaKnown RBP13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 OR2D2Q9H210 308 aa13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 HIPK2Q9H2X6 1198 aa13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 MBNL3Q9NUK0 354 aaKnown RBP13.77□□□□□ -0.21
TM9SF1-201ENST00000261789 SH2D1BO14796 132 aa13.76□□□□□ -0.21
TM9SF1-201ENST00000261789 CD59P13987 128 aa13.76□□□□□ -0.21
TM9SF1-201ENST00000261789 MDKP21741 143 aaPredicted RBP13.76□□□□□ -0.21
TM9SF1-201ENST00000261789 IGHV1-2P23083 117 aa13.76□□□□□ -0.21
TM9SF1-201ENST00000261789 HBG1P69891 147 aa13.76□□□□□ -0.21
TM9SF1-201ENST00000261789 HBG2P69892 147 aa13.76□□□□□ -0.21
TM9SF1-201ENST00000261789 ZNF610Q8N9Z0 462 aa13.76□□□□□ -0.21
TM9SF1-201ENST00000261789 TMPRSS5Q9H3S3 457 aa13.76□□□□□ -0.21
TM9SF1-201ENST00000261789 RBKSQ9H477 322 aa13.76□□□□□ -0.21
TM9SF1-201ENST00000261789 CDH20Q9HBT6 801 aa13.76□□□□□ -0.21
TM9SF1-201ENST00000261789 CISD1Q9NZ45 108 aaKnown RBP13.76□□□□□ -0.21
TM9SF1-201ENST00000261789 TREM2Q9NZC2 230 aa13.76□□□□□ -0.21
TM9SF1-201ENST00000261789 CLN8Q9UBY8 286 aa13.76□□□□□ -0.21
TM9SF1-201ENST00000261789 FZR1Q9UM11 496 aa13.76□□□□□ -0.21
TM9SF1-201ENST00000261789 POLDIP2Q9Y2S7 368 aa13.76□□□□□ -0.21
TM9SF1-201ENST00000261789 HAND1O96004 215 aa13.76□□□□□ -0.21
TM9SF1-201ENST00000261789 ZNF146Q15072 292 aa13.76□□□□□ -0.21
TM9SF1-201ENST00000261789 C4orf17Q53FE4 359 aa13.76□□□□□ -0.21
TM9SF1-201ENST00000261789 SPINK9Q5DT21 86 aa13.76□□□□□ -0.21
TM9SF1-201ENST00000261789 Q6ZR03 302 aa13.76□□□□□ -0.21
TM9SF1-201ENST00000261789 MOB1BQ7L9L4 216 aa13.76□□□□□ -0.21
TM9SF1-201ENST00000261789 TOLLIPQ9H0E2 274 aa13.76□□□□□ -0.21
TM9SF1-201ENST00000261789 OR51M1Q9H341 326 aa13.76□□□□□ -0.21
TM9SF1-201ENST00000261789 AGFG2O95081 481 aa13.75□□□□□ -0.21
TM9SF1-201ENST00000261789 SLC38A11Q08AI6 406 aa13.75□□□□□ -0.21
TM9SF1-201ENST00000261789 RPP25LQ8N5L8 163 aaKnown RBP13.75□□□□□ -0.21
TM9SF1-201ENST00000261789 TAF15Q92804 592 aaKnown RBP eCLIP13.75□□□□□ -0.21
TM9SF1-201ENST00000261789 OBP2BQ9NPH6 170 aa13.75□□□□□ -0.21
TM9SF1-201ENST00000261789 MAP1LC3B2A6NCE7 125 aa13.75□□□□□ -0.21
TM9SF1-201ENST00000261789 C12orf77C9JDV5 145 aa13.75□□□□□ -0.21
TM9SF1-201ENST00000261789 M0R296 226 aa13.75□□□□□ -0.21
TM9SF1-201ENST00000261789 DEFA4P12838 97 aa13.75□□□□□ -0.21
TM9SF1-201ENST00000261789 CD46P15529 392 aa13.75□□□□□ -0.21
TM9SF1-201ENST00000261789 UBE2NP61088 152 aaKnown RBP13.75□□□□□ -0.21
TM9SF1-201ENST00000261789 ARG2P78540 354 aa13.75□□□□□ -0.21
TM9SF1-201ENST00000261789 MBD3L1Q8WWY6 194 aa13.75□□□□□ -0.21
TM9SF1-201ENST00000261789 ZDHHC16Q969W1 377 aa13.75□□□□□ -0.21
TM9SF1-201ENST00000261789 MAP1LC3BQ9GZQ8 125 aa13.75□□□□□ -0.21
TM9SF1-201ENST00000261789 WIPI2Q9Y4P8 454 aa13.75□□□□□ -0.21
TM9SF1-201ENST00000261789 TNFRSF9Q07011 255 aa13.74□□□□□ -0.21
TM9SF1-201ENST00000261789 ZNF766Q5HY98 468 aa13.74□□□□□ -0.21
TM9SF1-201ENST00000261789 PYY3Q5JQD4 70 aa13.74□□□□□ -0.21
TM9SF1-201ENST00000261789 Q8IYB0 196 aa13.74□□□□□ -0.21
TM9SF1-201ENST00000261789 PSMG3Q9BT73 122 aaPredicted RBP13.74□□□□□ -0.21
TM9SF1-201ENST00000261789 SIRT7Q9NRC8 400 aa13.74□□□□□ -0.21
TM9SF1-201ENST00000261789 UFSP2Q9NUQ7 469 aa13.74□□□□□ -0.21
TM9SF1-201ENST00000261789 IGHV3-43A0A0B4J1X8 118 aa13.74□□□□□ -0.21
TM9SF1-201ENST00000261789 CDX4O14627 284 aaPredicted RBP13.74□□□□□ -0.21
TM9SF1-201ENST00000261789 S1PR2O95136 353 aa13.74□□□□□ -0.21
TM9SF1-201ENST00000261789 WNT2P09544 360 aa13.74□□□□□ -0.21
TM9SF1-201ENST00000261789 ZNF883P0CG24 379 aa13.74□□□□□ -0.21
TM9SF1-201ENST00000261789 IGHV3-43DP0DP04 118 aa13.74□□□□□ -0.21
TM9SF1-201ENST00000261789 CDX1P47902 265 aaPredicted RBP13.74□□□□□ -0.21
TM9SF1-201ENST00000261789 BRWD1-AS2P59051 145 aa13.74□□□□□ -0.21
TM9SF1-201ENST00000261789 TMEM41BQ5BJD5 291 aa13.74□□□□□ -0.21
TM9SF1-201ENST00000261789 KLF14Q8TD94 323 aaPredicted RBP13.74□□□□□ -0.21
TM9SF1-201ENST00000261789 MRGPRDQ8TDS7 321 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms