RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 CDKN1AP38936 164 aa12.54□□□□□ -0.4
HDHD3-201ENST00000238379 SRSF1Q07955 248 aaKnown RBP eCLIP12.54□□□□□ -0.4
HDHD3-201ENST00000238379 TMEM30BQ3MIR4 351 aa12.54□□□□□ -0.4
HDHD3-201ENST00000238379 AVPI1Q5T686 147 aa12.54□□□□□ -0.4
HDHD3-201ENST00000238379 ZNF546Q86UE3 836 aa12.54□□□□□ -0.4
HDHD3-201ENST00000238379 OR52M1Q8NGK5 317 aa12.54□□□□□ -0.4
HDHD3-201ENST00000238379 H1FXQ92522 213 aaKnown RBP12.54□□□□□ -0.4
HDHD3-201ENST00000238379 GON7Q9BXV9 100 aa12.54□□□□□ -0.4
HDHD3-201ENST00000238379 SDHAF2Q9NX18 166 aa12.54□□□□□ -0.4
HDHD3-201ENST00000238379 LPAR3Q9UBY5 353 aa12.54□□□□□ -0.4
HDHD3-201ENST00000238379 ARID1AO14497 2285 aa12.54□□□□□ -0.4
HDHD3-201ENST00000238379 USF3Q68DE3 2245 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 DUXBA0A1W2PPF3 345 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 PROP1O75360 226 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 SERPINE2P07093 398 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 RPA2P15927 270 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 RPL30P62888 115 aaKnown RBP12.53□□□□□ -0.4
HDHD3-201ENST00000238379 RAB32Q13637 225 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 ZNF585BQ52M93 769 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 ZNF841Q6ZN19 808 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 THAP6Q8TBB0 222 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 LEAP2Q969E1 77 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 SPOCK3Q9BQ16 436 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 GAL3ST2Q9H3Q3 398 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 PLEKHF2Q9H8W4 249 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 LIN7CQ9NUP9 197 aaKnown RBP12.53□□□□□ -0.4
HDHD3-201ENST00000238379 MBD2Q9UBB5 411 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 RPUSD1Q9UJJ7 312 aaKnown RBP12.53□□□□□ -0.4
HDHD3-201ENST00000238379 TNFSF18Q9UNG2 199 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 RNF212BA8MTL3 300 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 L7N2F9 121 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 SLC31A2O15432 143 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 NDUFS7O75251 213 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 CCL3L1P16619 93 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 ZNF16P17020 682 aaPredicted RBP12.53□□□□□ -0.4
HDHD3-201ENST00000238379 VDAC1P21796 283 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 NMSQ5H8A3 153 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 CT45A1Q5HYN5 189 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 PRAMEF5Q5TYX0 476 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 FAM219AQ8IW50 185 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 ZNF439Q8NDP4 499 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 OR10A7Q8NGE5 316 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 CT45A3Q8NHU0 189 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 RAB1CQ92928 201 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 ZNF714Q96N38 554 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 MFFQ9GZY8 342 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 IFI27L2Q9H2X8 130 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 SLA2Q9H6Q3 261 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 HEXA-AS1Q9H8Q6 139 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 CHODLQ9H9P2 273 aa12.53□□□□□ -0.4
HDHD3-201ENST00000238379 KMT2BQ9UMN6 2715 aaPredicted RBP12.52□□□□□ -0.41
HDHD3-201ENST00000238379 RGS13O14921 159 aa12.52□□□□□ -0.41
HDHD3-201ENST00000238379 F12P00748 615 aaPredicted RBP12.52□□□□□ -0.41
HDHD3-201ENST00000238379 IGKV1-39P01597 117 aa12.52□□□□□ -0.41
HDHD3-201ENST00000238379 IGKV1D-39P04432 117 aa12.52□□□□□ -0.41
HDHD3-201ENST00000238379 LYL1P12980 280 aa12.52□□□□□ -0.41
HDHD3-201ENST00000238379 NFYBP25208 207 aa12.52□□□□□ -0.41
HDHD3-201ENST00000238379 ERVFRD-1P60508 538 aa12.52□□□□□ -0.41
HDHD3-201ENST00000238379 Q3ZCU0 254 aa12.52□□□□□ -0.41
HDHD3-201ENST00000238379 BTNL3Q6UXE8 466 aa12.52□□□□□ -0.41
HDHD3-201ENST00000238379 HEPN1Q6WQI6 88 aa12.52□□□□□ -0.41
HDHD3-201ENST00000238379 ZNF66Q6ZN08 573 aa12.52□□□□□ -0.41
HDHD3-201ENST00000238379 TIMD4Q96H15 378 aa12.52□□□□□ -0.41
HDHD3-201ENST00000238379 OVOL3O00110 214 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 PPIHO43447 177 aaKnown RBP12.51□□□□□ -0.41
HDHD3-201ENST00000238379 GPR12P47775 334 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 RAB7AP51149 207 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 DLX6P56179 175 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 TMEM33P57088 247 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 BRWD1-AS2P59051 145 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 TLE4Q04727 773 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 TMEM155Q4W5P6 130 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 PRSS54Q6PEW0 395 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 ABHD14AQ9BUJ0 271 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 OR5AC2Q9NZP5 309 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 CHD6Q8TD26 2715 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 TRBV23-1A0A0A0MS06 115 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 PIGBOS1A0A0B4J2F0 54 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 CLEC18AA5D8T8 446 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 LINC00473A8K010 186 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 TSC22D2O75157 780 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 CLDN1O95832 211 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 S100A11P31949 105 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 LINC00205P59089 165 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 CATR1Q13166 79 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 OPCMLQ14982 345 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 TMUB2Q71RG4 321 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 CLEC18CQ8NCF0 446 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 IGFBPL1Q8WX77 278 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 HSD17B10Q99714 261 aaKnown RBP12.51□□□□□ -0.41
HDHD3-201ENST00000238379 MIOXQ9UGB7 285 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 GAB2Q9UQC2 676 aa12.51□□□□□ -0.41
HDHD3-201ENST00000238379 LRRK2Q5S007 2527 aa12.5□□□□□ -0.41
HDHD3-201ENST00000238379 MALRD1Q5VYJ5 2156 aa12.5□□□□□ -0.41
HDHD3-201ENST00000238379 A0A1W2PPE3 182 aa12.5□□□□□ -0.41
HDHD3-201ENST00000238379 RNF222A6NCQ9 220 aa12.5□□□□□ -0.41
HDHD3-201ENST00000238379 C17orf98A8MV24 154 aa12.5□□□□□ -0.41
HDHD3-201ENST00000238379 GPR37O15354 613 aa12.5□□□□□ -0.41
HDHD3-201ENST00000238379 MBPP02686 304 aaPredicted RBP12.5□□□□□ -0.41
HDHD3-201ENST00000238379 EFNA4P52798 201 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms