RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 MOB3BQ86TA1 216 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 IGHV3-13P01766 116 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 IGHV3-7P01780 117 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 LCN2P80188 198 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 SMAGPQ0VAQ4 97 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 RHBDD2Q6NTF9 364 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 TMEM108Q6UXF1 575 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 ATG4DQ86TL0 474 aaPredicted RBP9.08□□□□□ -0.96
VCL-201ENST00000211998 BIVMQ86UB2 503 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 IMMP2LQ96T52 175 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 TMEM222Q9H0R3 208 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 IL36GQ9NZH8 169 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 IL36RNQ9UBH0 155 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 PXMP4Q9Y6I8 212 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 WISP3O95389 354 aaPredicted RBP9.08□□□□□ -0.96
VCL-201ENST00000211998 FCGR3AP08637 254 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 PNLIPP16233 465 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 TMEM92Q6UXU6 159 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 PRSS41Q7RTY9 318 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 COL18A1P39060 1754 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 H3BUT2 72 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 TSPAN13O95857 204 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 GALNSP34059 522 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 RPS11P62280 158 aaKnown RBP eCLIP9.07□□□□□ -0.96
VCL-201ENST00000211998 ZIC1Q15915 447 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 GFI1BQ5VTD9 330 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 HIST3H2BBQ8N257 126 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 CLEC5AQ9NY25 188 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 KIAA1551Q9HCM1 1747 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 TRAV38-1A0A0B4J264 116 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 LMX1BO60663 402 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 S1PR2O95136 353 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 IL4P05112 153 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 COX6CP09669 75 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 COL9A1P20849 921 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 PMELP40967 661 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 DEFB124Q8NES8 71 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 OR4S2Q8NH73 311 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 TMEM45BQ96B21 275 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 ANAPC13Q9BS18 74 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 FNDC4Q9H6D8 234 aaPredicted RBP9.07□□□□□ -0.96
VCL-201ENST00000211998 ECM29Q5VYK3 1845 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 FSTP19883 344 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 MMDQ15546 238 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 GBGT1Q8N5D6 347 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 SOSTQ9BQB4 213 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 AMMECR1Q9Y4X0 333 aaPredicted RBP9.07□□□□□ -0.96
VCL-201ENST00000211998 SPAG17Q6Q759 2223 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 A0A1W2PQD3 144 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 DRD3P35462 400 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 RPL30P62888 115 aaKnown RBP9.07□□□□□ -0.96
VCL-201ENST00000211998 TRIP6Q15654 476 aaKnown RBP9.07□□□□□ -0.96
VCL-201ENST00000211998 ALKBH6Q3KRA9 238 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 C10orf126Q8N4M7 172 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 ZNF418Q8TF45 676 aaPredicted RBP9.07□□□□□ -0.96
VCL-201ENST00000211998 SLC25A28Q96A46 364 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 GNRHR2Q96P88 292 aa9.07□□□□□ -0.96
VCL-201ENST00000211998 LINC00869P0C866 280 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 PATE4P0C8F1 98 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 ZNF83P51522 516 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 PERPQ96FX8 193 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 HEXA-AS1Q9H8Q6 139 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 HSPB7Q9UBY9 170 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 RPL36A-HNRNPH2H7BZ11 118 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 STAG3L3P0CL85 134 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 BTCP35070 178 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 STARD6P59095 220 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 C19orf48Q6RUI8 117 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 RPEQ96AT9 228 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 C10orf35Q96D05 121 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 ABHD14BQ96IU4 210 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 SLX1AQ9BQ83 275 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 REG4Q9BYZ8 158 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 ONECUT1Q9UBC0 465 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 A0A1W2PRS3 328 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 CRXO43186 299 aaPredicted RBP9.06□□□□□ -0.96
VCL-201ENST00000211998 HEPN1Q6WQI6 88 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 PGLYRP4Q96LB8 373 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 RPP25Q9BUL9 199 aaKnown RBP9.06□□□□□ -0.96
VCL-201ENST00000211998 A0A1W2PP11 408 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 PYY3Q5JQD4 70 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 UNQ9370/PRO34162Q6UXP9 181 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 VN1R4Q7Z5H5 301 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 PRNTQ86SH4 94 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 VASH2Q86V25 355 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 OR10AG1Q8NH19 301 aa9.06□□□□□ -0.96
VCL-201ENST00000211998 SF3B5Q9BWJ5 86 aaKnown RBP9.06□□□□□ -0.96
VCL-201ENST00000211998 ZNF716A6NP11 495 aa9.05□□□□□ -0.96
VCL-201ENST00000211998 ISG15P05161 165 aa9.05□□□□□ -0.96
VCL-201ENST00000211998 AREGP15514 252 aa9.05□□□□□ -0.96
VCL-201ENST00000211998 EGR1P18146 543 aa9.05□□□□□ -0.96
VCL-201ENST00000211998 SPINK2P20155 84 aa9.05□□□□□ -0.96
VCL-201ENST00000211998 SLC23A3Q6PIS1 610 aa9.05□□□□□ -0.96
VCL-201ENST00000211998 CRISPLD2Q9H0B8 497 aa9.05□□□□□ -0.96
VCL-201ENST00000211998 MPC1Q9Y5U8 109 aa9.05□□□□□ -0.96
VCL-201ENST00000211998 K7EQS6 105 aa9.05□□□□□ -0.96
VCL-201ENST00000211998 VENTXO95231 258 aa9.05□□□□□ -0.96
VCL-201ENST00000211998 ZAR1Q86SH2 424 aa9.05□□□□□ -0.96
VCL-201ENST00000211998 OR6X1Q8NH79 312 aa9.05□□□□□ -0.96
VCL-201ENST00000211998 OR1L1Q8NH94 360 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms