RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 EnamO55196 1274 aa10.09□□□□□ -0.79
Col9a1-202ENSMUST00000088349 AregP31955 248 aa10.09□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Egr3P43300 387 aa10.09□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Jagn1Q5XKN4 183 aa10.09□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Olfr688Q6W049 321 aa10.09□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Zpld1Q8BGZ8 415 aa10.09□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Tmem234Q8R1E7 140 aa10.09□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Olfr1270Q8VGP3 304 aa10.09□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Olfr639Q8VGY8 316 aa10.09□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Tceal8Q9CZY2 117 aa10.09□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Mmp24Q9R0S2 618 aa10.09□□□□□ -0.79
Col9a1-202ENSMUST00000088349 Igkv6-25A0A140T8N7 115 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 6330409D20RikA2AK85 162 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Gm12666A2AMD0 254 aaKnown RBP10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Gm6880A3KG45 208 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Zfp942B8JJA7 486 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 EndogO08600 294 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Smr2O09133 150 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Tlx3O55144 291 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Dhrs3O88876 302 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 NdnP25233 325 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Nanos2P60322 136 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 F13bQ07968 669 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Grb2Q60631 217 aaKnown RBP10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr180Q7TS48 317 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Zim1Q8C393 579 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Fcrl1Q8R4Y0 343 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr1427Q8VFU9 311 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Tcf23Q9JLR5 209 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Npas3Q9QZQ0 925 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Cldn10Q9Z0S6 231 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Lrp4Q8VI56 1905 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Gm11361A0A1Y7VKY1 152 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Zdhhc22A0PK84 263 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Fam53aE9PV82 402 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Gm10037E9PX85 104 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Vmn2r83E9Q0G7 864 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Bmi1P25916 324 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Cdx2P43241 311 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Rps18P62270 152 aaKnown RBP10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 BaxQ07813 192 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Prr27Q3SYJ2 352 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Arg1Q61176 323 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Pced1aQ6P1Z5 449 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Znf250Q7TNU6 535 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr275Q7TS18 319 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Nectin4Q8R007 508 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr1201Q8VGF5 307 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Rab5aQ9CQD1 215 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 ManbalQ9D8X0 85 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Pcnx1Q9QYC1 2344 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr587-ps1A0A1B0GSS1 159 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Scgb1b29D2XZ31 93 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Scgb1b20E9PWZ2 93 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 D430019H16RikJ3QPM6 83 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Gm8265K7N6Y8 158 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Glp1rO35659 463 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 BlkP16277 499 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Osgin2Q3TEE9 550 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 UevldQ3U1V6 471 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Cdv3Q4VAA2 281 aaKnown RBP10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Trav5d-4Q5R1F6 114 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Kyat3Q71RI9 455 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Mrps26Q80ZS3 200 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr1443Q8VFW8 312 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Lhfpl3Q9CTN8 222 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Ncor1Q60974 2453 aa10.08□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Hmgb3O54879 200 aaKnown RBP10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 P01638 115 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 P01881 257 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Scd2P13011 358 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Klk1b5P15945 261 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 HexbP20060 536 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Slc25a4P48962 298 aaKnown RBP10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Rps10P63325 165 aaKnown RBP10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 CluQ06890 448 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Foxf1Q61080 378 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Nxph2Q61199 261 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Ell3Q80VR2 395 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Prss27Q8BJR6 328 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Fam110cQ8VE94 421 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr129Q8VEY1 330 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr638Q8VH20 321 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Rbmxl1Q91VM5 388 aaKnown RBP10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Sdf2l1Q9ESP1 221 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Fbp1Q9QXD6 338 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr1490A0A1L1SVH0 321 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 PtgfrP43117 366 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Tcl1aP56280 116 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 FrzbP97401 323 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Gls2Q571F8 602 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Slc35e3Q6PGC7 313 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Ntf4Q80VU4 209 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Nhlrc3Q8CCH2 347 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Vmn1r66Q8K4I0 310 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Vmn1r89Q8R256 316 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Olfr1368Q8VFG3 314 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Lyzl6Q9DA11 148 aa10.07□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Gm3573L7N292 184 aa10.06□□□□□ -0.8
Col9a1-202ENSMUST00000088349 Vmn2r60L7N2A1 853 aa10.06□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms