RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Olfr1377Q8VGH1 307 aa14.28□□□□□ -0.12
Shh-201ENSMUST00000002708 Dnajb11Q99KV1 358 aa14.28□□□□□ -0.12
Shh-201ENSMUST00000002708 Ms4a4dQ99N05 225 aa14.28□□□□□ -0.12
Shh-201ENSMUST00000002708 Zfp429Q7M6Y0 485 aa14.28□□□□□ -0.12
Shh-201ENSMUST00000002708 Vmn1r8Q8R2C2 303 aa14.28□□□□□ -0.12
Shh-201ENSMUST00000002708 Olfr1449Q8VEV8 314 aa14.28□□□□□ -0.12
Shh-201ENSMUST00000002708 Gjc3Q921C1 269 aa14.28□□□□□ -0.12
Shh-201ENSMUST00000002708 Zfp869Q9DC47 529 aa14.28□□□□□ -0.12
Shh-201ENSMUST00000002708 Smco4Q9JIS3 59 aa14.28□□□□□ -0.12
Shh-201ENSMUST00000002708 Olfr789A0A1L1SV77 312 aa14.27□□□□□ -0.12
Shh-201ENSMUST00000002708 Gm13547A2ARC0 163 aa14.27□□□□□ -0.12
Shh-201ENSMUST00000002708 Gm6880A3KG45 208 aa14.27□□□□□ -0.12
Shh-201ENSMUST00000002708 Yjefn3F6W8I0 251 aa14.27□□□□□ -0.12
Shh-201ENSMUST00000002708 D430019H16RikJ3QPM6 83 aa14.27□□□□□ -0.12
Shh-201ENSMUST00000002708 Siva1O54926 175 aa14.27□□□□□ -0.12
Shh-201ENSMUST00000002708 Col5a1O88207 1838 aa14.27□□□□□ -0.12
Shh-201ENSMUST00000002708 Ppt1O88531 306 aa14.27□□□□□ -0.12
Shh-201ENSMUST00000002708 SgcaP82350 387 aa14.27□□□□□ -0.12
Shh-201ENSMUST00000002708 Prr27Q3SYJ2 352 aa14.27□□□□□ -0.12
Shh-201ENSMUST00000002708 Prss27Q8BJR6 328 aa14.27□□□□□ -0.12
Shh-201ENSMUST00000002708 Lrrc10Q8K3W2 274 aa14.27□□□□□ -0.12
Shh-201ENSMUST00000002708 Fcrl1Q8R4Y0 343 aa14.27□□□□□ -0.12
Shh-201ENSMUST00000002708 Mapk7Q9WVS8 806 aa14.27□□□□□ -0.12
Shh-201ENSMUST00000002708 Ighv14-4A0A0A6YVR1 117 aa14.27□□□□□ -0.13
Shh-201ENSMUST00000002708 Gm11361A0A1Y7VKY1 152 aa14.27□□□□□ -0.13
Shh-201ENSMUST00000002708 Rab5bP61021 215 aa14.27□□□□□ -0.13
Shh-201ENSMUST00000002708 Rps18P62270 152 aaKnown RBP14.27□□□□□ -0.13
Shh-201ENSMUST00000002708 Lsm6P62313 80 aaKnown RBP14.27□□□□□ -0.13
Shh-201ENSMUST00000002708 Il9rQ01114 468 aa14.27□□□□□ -0.13
Shh-201ENSMUST00000002708 S100a15aQ6S5I3 108 aa14.27□□□□□ -0.13
Shh-201ENSMUST00000002708 Olfr222Q7TS30 318 aa14.27□□□□□ -0.13
Shh-201ENSMUST00000002708 Tbl1xr1Q8BHJ5 514 aa14.27□□□□□ -0.13
Shh-201ENSMUST00000002708 Ahsa1Q8BK64 338 aa14.27□□□□□ -0.13
Shh-201ENSMUST00000002708 Dctn4Q8CBY8 467 aa14.27□□□□□ -0.13
Shh-201ENSMUST00000002708 Slc25a22Q9D6M3 323 aa14.27□□□□□ -0.13
Shh-201ENSMUST00000002708 Zfp764E9QAP1 431 aa14.26□□□□□ -0.13
Shh-201ENSMUST00000002708 Btg2Q04211 158 aa14.26□□□□□ -0.13
Shh-201ENSMUST00000002708 Nkain3Q3URJ8 181 aa14.26□□□□□ -0.13
Shh-201ENSMUST00000002708 Olfr506Q7TRU6 314 aa14.26□□□□□ -0.13
Shh-201ENSMUST00000002708 Edem2Q8BJT9 577 aa14.26□□□□□ -0.13
Shh-201ENSMUST00000002708 Parp11Q8CFF0 331 aa14.26□□□□□ -0.13
Shh-201ENSMUST00000002708 Olfr1324Q8VEU7 332 aa14.26□□□□□ -0.13
Shh-201ENSMUST00000002708 Olfr1427Q8VFU9 311 aa14.26□□□□□ -0.13
Shh-201ENSMUST00000002708 Aig1Q9D8B1 262 aa14.26□□□□□ -0.13
Shh-201ENSMUST00000002708 Jmjd1cQ69ZK6 2350 aa14.26□□□□□ -0.13
Shh-201ENSMUST00000002708 Olfr905L7N1X5 310 aa14.26□□□□□ -0.13
Shh-201ENSMUST00000002708 Cbfa2t3O54972 620 aa14.26□□□□□ -0.13
Shh-201ENSMUST00000002708 Dhrs3O88876 302 aa14.26□□□□□ -0.13
Shh-201ENSMUST00000002708 GusbP12265 648 aa14.26□□□□□ -0.13
Shh-201ENSMUST00000002708 Hist1h1dP43277 221 aaKnown RBP14.26□□□□□ -0.13
Shh-201ENSMUST00000002708 Nanos2P60322 136 aa14.26□□□□□ -0.13
Shh-201ENSMUST00000002708 Ppp1ccP63087 323 aa14.26□□□□□ -0.13
Shh-201ENSMUST00000002708 Lpar5Q149R9 372 aa14.26□□□□□ -0.13
Shh-201ENSMUST00000002708 McidasQ3UZ45 379 aa14.26□□□□□ -0.13
Shh-201ENSMUST00000002708 Prss54Q7M756 383 aa14.26□□□□□ -0.13
Shh-201ENSMUST00000002708 Olfr187Q8VEX6 308 aa14.26□□□□□ -0.13
Shh-201ENSMUST00000002708 MpiQ924M7 423 aa14.26□□□□□ -0.13
Shh-201ENSMUST00000002708 Scrt1Q99M85 348 aa14.26□□□□□ -0.13
Shh-201ENSMUST00000002708 Bcl2l14Q9CPT0 328 aa14.26□□□□□ -0.13
Shh-201ENSMUST00000002708 D730048I06RikQ9CQB8 106 aa14.26□□□□□ -0.13
Shh-201ENSMUST00000002708 Olfr1335B2RVY8 335 aa14.25□□□□□ -0.13
Shh-201ENSMUST00000002708 Gm17657E9PWY5 170 aa14.25□□□□□ -0.13
Shh-201ENSMUST00000002708 Kcnk3O35111 409 aa14.25□□□□□ -0.13
Shh-201ENSMUST00000002708 Cd300lbQ3U497 209 aa14.25□□□□□ -0.13
Shh-201ENSMUST00000002708 Gm12258Q5NC63 627 aa14.25□□□□□ -0.13
Shh-201ENSMUST00000002708 Cdadc1Q8BMD5 523 aa14.25□□□□□ -0.13
Shh-201ENSMUST00000002708 Txnl1Q8CDN6 289 aaKnown RBP14.25□□□□□ -0.13
Shh-201ENSMUST00000002708 Sco2Q8VCL2 255 aa14.25□□□□□ -0.13
Shh-201ENSMUST00000002708 Olfr56Q8VGD6 315 aa14.25□□□□□ -0.13
Shh-201ENSMUST00000002708 Defb6Q91VD6 63 aa14.25□□□□□ -0.13
Shh-201ENSMUST00000002708 Memo1Q91VH6 297 aa14.25□□□□□ -0.13
Shh-201ENSMUST00000002708 DohhQ99LN9 302 aa14.25□□□□□ -0.13
Shh-201ENSMUST00000002708 Prune2Q52KR3 3084 aa14.25□□□□□ -0.13
Shh-201ENSMUST00000002708 Muc5acE9QAQ8 3455 aa14.25□□□□□ -0.13
Shh-201ENSMUST00000002708 Gm28870A0A0A6YW38 222 aa14.25□□□□□ -0.13
Shh-201ENSMUST00000002708 Cyb561d1A2AE42 229 aa14.25□□□□□ -0.13
Shh-201ENSMUST00000002708 Gm498D3YYH9 372 aa14.25□□□□□ -0.13
Shh-201ENSMUST00000002708 Lyz2P08905 148 aa14.25□□□□□ -0.13
Shh-201ENSMUST00000002708 CebpbP28033 296 aa14.25□□□□□ -0.13
Shh-201ENSMUST00000002708 NfybP63139 207 aa14.25□□□□□ -0.13
Shh-201ENSMUST00000002708 Zfp975Q6NVD6 525 aa14.25□□□□□ -0.13
Shh-201ENSMUST00000002708 Faap24Q8BHL6 221 aa14.25□□□□□ -0.13
Shh-201ENSMUST00000002708 Cmc2Q8K199 79 aa14.25□□□□□ -0.13
Shh-201ENSMUST00000002708 Olfr1297Q8VGE8 312 aa14.25□□□□□ -0.13
Shh-201ENSMUST00000002708 Nxph3Q91VX5 252 aa14.25□□□□□ -0.13
Shh-201ENSMUST00000002708 Ankdd1aA0A1L1ST07 508 aa14.24□□□□□ -0.13
Shh-201ENSMUST00000002708 Ifna9P09235 190 aa14.24□□□□□ -0.13
Shh-201ENSMUST00000002708 HexbP20060 536 aa14.24□□□□□ -0.13
Shh-201ENSMUST00000002708 Slc17a5Q8BN82 495 aa14.24□□□□□ -0.13
Shh-201ENSMUST00000002708 Tox4Q8BU11 619 aa14.24□□□□□ -0.13
Shh-201ENSMUST00000002708 Vmn1r36Q8R2E3 305 aa14.24□□□□□ -0.13
Shh-201ENSMUST00000002708 Olfr446Q8VEV0 308 aa14.24□□□□□ -0.13
Shh-201ENSMUST00000002708 Q9CQT9 129 aa14.24□□□□□ -0.13
Shh-201ENSMUST00000002708 Rab32Q9CZE3 223 aa14.24□□□□□ -0.13
Shh-201ENSMUST00000002708 Gpr37Q9QY42 600 aa14.24□□□□□ -0.13
Shh-201ENSMUST00000002708 Gm884A2A9H6 3643 aa14.24□□□□□ -0.13
Shh-201ENSMUST00000002708 Igkv6-14A0A140T8P1 115 aa14.24□□□□□ -0.13
Shh-201ENSMUST00000002708 Ube2ql1A0PJN4 161 aa14.24□□□□□ -0.13
Shh-201ENSMUST00000002708 Tmem171Q4KL18 322 aa14.24□□□□□ -0.13
Shh-201ENSMUST00000002708 Fbxw20Q5U467 468 aa14.24□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms