RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 GCM1Q9NP62 436 aa9.84□□□□□ -0.83
ERGIC3-220ENST00000640748 MBNL3Q9NUK0 354 aaKnown RBP9.84□□□□□ -0.83
ERGIC3-220ENST00000640748 KCNIP1Q9NZI2 227 aa9.84□□□□□ -0.83
ERGIC3-220ENST00000640748 PPP1R3CQ9UQK1 317 aa9.84□□□□□ -0.83
ERGIC3-220ENST00000640748 LOC105371242A0A075B767 164 aa9.83□□□□□ -0.84
ERGIC3-220ENST00000640748 IGHV3OR15-7A0A075B7D8 119 aa9.83□□□□□ -0.84
ERGIC3-220ENST00000640748 TRAV20A0A0B4J274 112 aa9.83□□□□□ -0.84
ERGIC3-220ENST00000640748 TEX13DA0A0J9YY54 714 aaPredicted RBP9.83□□□□□ -0.84
ERGIC3-220ENST00000640748 OOEPA6NGQ2 149 aa9.83□□□□□ -0.84
ERGIC3-220ENST00000640748 CRYM-AS1A6NIL9 109 aa9.83□□□□□ -0.84
ERGIC3-220ENST00000640748 SIX6O95475 246 aa9.83□□□□□ -0.84
ERGIC3-220ENST00000640748 HLA-GP17693 338 aa9.83□□□□□ -0.84
ERGIC3-220ENST00000640748 CD80P33681 288 aa9.83□□□□□ -0.84
ERGIC3-220ENST00000640748 HOXA4Q00056 320 aaPredicted RBP9.83□□□□□ -0.84
ERGIC3-220ENST00000640748 HERPUD1Q15011 391 aa9.83□□□□□ -0.84
ERGIC3-220ENST00000640748 SLC9A3R2Q15599 337 aa9.83□□□□□ -0.84
ERGIC3-220ENST00000640748 HMGN3Q15651 99 aa9.83□□□□□ -0.84
ERGIC3-220ENST00000640748 C6orf183Q5T699 404 aa9.83□□□□□ -0.84
ERGIC3-220ENST00000640748 KCTD9Q7L273 389 aa9.83□□□□□ -0.84
ERGIC3-220ENST00000640748 CD177Q8N6Q3 437 aa9.83□□□□□ -0.84
ERGIC3-220ENST00000640748 ZNF565Q8N9K5 539 aa9.83□□□□□ -0.84
ERGIC3-220ENST00000640748 OR5M8Q8NGP6 311 aa9.83□□□□□ -0.84
ERGIC3-220ENST00000640748 OR2T35Q8NGX2 323 aa9.83□□□□□ -0.84
ERGIC3-220ENST00000640748 OR10J5Q8NHC4 309 aa9.83□□□□□ -0.84
ERGIC3-220ENST00000640748 ZNF418Q8TF45 676 aaPredicted RBP9.83□□□□□ -0.84
ERGIC3-220ENST00000640748 RSRP1Q9BUV0 290 aa9.83□□□□□ -0.84
ERGIC3-220ENST00000640748 PIPOXQ9P0Z9 390 aa9.83□□□□□ -0.84
ERGIC3-220ENST00000640748 KIAA2026Q5HYC2 2103 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 IGKV1D-17A0A075B6S4 117 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 TRBV6-7A0A0A0MS04 114 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 IGKV1-6A0A0C4DH72 117 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 LRRC30A6NM36 301 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 NPIPB11E5RHQ5 1161 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 MGST3O14880 152 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 KCNAB3O43448 404 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 TUSC2O75896 110 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 RGS11O94810 467 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 ZNF205O95201 554 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 CYB5R3P00387 301 aaPredicted RBP9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 TFF1P04155 84 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 EPHA1P21709 976 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 RBMXP38159 391 aaKnown RBP9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 PIGPP57054 158 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 SUPT4H1P63272 117 aaKnown RBP9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 CCL8P80075 99 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 PAX5Q02548 391 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 AESQ08117 197 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 KRBOX4Q5JUW0 171 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 AVPI1Q5T686 147 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 TRAT1Q6PIZ9 186 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 C5orf24Q7Z6I8 188 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 FAM185AQ8N0U4 392 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 C1orf87Q8N0U7 546 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 C3orf56Q8N813 242 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 COQ2Q96H96 371 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 KIRREL1Q96J84 757 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 ZNF665Q9H7R5 613 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 NAA60Q9H7X0 242 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 SAP30LQ9HAJ7 183 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 ESM1Q9NQ30 184 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 KIF25Q9UIL4 384 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 KCNIP3Q9Y2W7 256 aa9.82□□□□□ -0.84
ERGIC3-220ENST00000640748 TRAV39A0A0B4J263 110 aa9.81□□□□□ -0.84
ERGIC3-220ENST00000640748 DBX1A6NMT0 343 aa9.81□□□□□ -0.84
ERGIC3-220ENST00000640748 ZNF737O75373 536 aa9.81□□□□□ -0.84
ERGIC3-220ENST00000640748 RPS2P15880 293 aaKnown RBP9.81□□□□□ -0.84
ERGIC3-220ENST00000640748 MUC1P15941 1255 aaPredicted RBP9.81□□□□□ -0.84
ERGIC3-220ENST00000640748 H2BFSP57053 126 aa9.81□□□□□ -0.84
ERGIC3-220ENST00000640748 RND3P61587 244 aa9.81□□□□□ -0.84
ERGIC3-220ENST00000640748 SRSF4Q08170 494 aaKnown RBP9.81□□□□□ -0.84
ERGIC3-220ENST00000640748 LY6G6FQ5SQ64 297 aa9.81□□□□□ -0.84
ERGIC3-220ENST00000640748 DCAF12L2Q5VW00 463 aa9.81□□□□□ -0.84
ERGIC3-220ENST00000640748 TEX36Q5VZQ5 186 aa9.81□□□□□ -0.84
ERGIC3-220ENST00000640748 GSG1LQ6UXU4 331 aa9.81□□□□□ -0.84
ERGIC3-220ENST00000640748 H1FOOQ8IZA3 346 aaPredicted RBP9.81□□□□□ -0.84
ERGIC3-220ENST00000640748 ZNF561Q8N587 486 aa9.81□□□□□ -0.84
ERGIC3-220ENST00000640748 ZBTB8BQ8NAP8 495 aaPredicted RBP9.81□□□□□ -0.84
ERGIC3-220ENST00000640748 OR5D13Q8NGL4 314 aa9.81□□□□□ -0.84
ERGIC3-220ENST00000640748 ANGPTL6Q8NI99 470 aa9.81□□□□□ -0.84
ERGIC3-220ENST00000640748 SECTM1Q8WVN6 248 aa9.81□□□□□ -0.84
ERGIC3-220ENST00000640748 RTN4IP1Q8WWV3 396 aaPredicted RBP9.81□□□□□ -0.84
ERGIC3-220ENST00000640748 IL1F10Q8WWZ1 152 aa9.81□□□□□ -0.84
ERGIC3-220ENST00000640748 PDCD10Q9BUL8 212 aa9.81□□□□□ -0.84
ERGIC3-220ENST00000640748 SLC5A7Q9GZV3 580 aa9.81□□□□□ -0.84
ERGIC3-220ENST00000640748 TAF9BQ9HBM6 251 aa9.81□□□□□ -0.84
ERGIC3-220ENST00000640748 RAB18Q9NP72 206 aa9.81□□□□□ -0.84
ERGIC3-220ENST00000640748 OPN4Q9UHM6 478 aa9.81□□□□□ -0.84
ERGIC3-220ENST00000640748 GPR31O00270 319 aa9.8□□□□□ -0.84
ERGIC3-220ENST00000640748 CCSO14618 274 aa9.8□□□□□ -0.84
ERGIC3-220ENST00000640748 HSPA12AO43301 675 aa9.8□□□□□ -0.84
ERGIC3-220ENST00000640748 SNAPC5O75971 98 aa9.8□□□□□ -0.84
ERGIC3-220ENST00000640748 FSHBP01225 129 aa9.8□□□□□ -0.84
ERGIC3-220ENST00000640748 IGHV2-5P01817 119 aa9.8□□□□□ -0.84
ERGIC3-220ENST00000640748 S100GP29377 79 aa9.8□□□□□ -0.84
ERGIC3-220ENST00000640748 GLIPR1P48060 266 aa9.8□□□□□ -0.84
ERGIC3-220ENST00000640748 SCGB2A2Q13296 93 aa9.8□□□□□ -0.84
ERGIC3-220ENST00000640748 TUSC1Q2TAM9 212 aa9.8□□□□□ -0.84
ERGIC3-220ENST00000640748 ANKRD55Q3KP44 614 aa9.8□□□□□ -0.84
ERGIC3-220ENST00000640748 PHLDA2Q53GA4 152 aa9.8□□□□□ -0.84
ERGIC3-220ENST00000640748 STUMQ69YW2 141 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms