RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 VEGFCP49767 419 aa17.75■□□□□ 0.43
SF1-220ENST00000626028 TMEM50BP56557 158 aa17.75■□□□□ 0.43
SF1-220ENST00000626028 CLDN12P56749 244 aa17.75■□□□□ 0.43
SF1-220ENST00000626028 KCTD21Q4G0X4 260 aa17.75■□□□□ 0.43
SF1-220ENST00000626028 FAM53AQ6NSI3 398 aaPredicted RBP17.75■□□□□ 0.43
SF1-220ENST00000626028 LYG1Q8N1E2 194 aa17.75■□□□□ 0.43
SF1-220ENST00000626028 OR2AK2Q8NG84 335 aa17.75■□□□□ 0.43
SF1-220ENST00000626028 OR4F17Q8NGA8 305 aa17.75■□□□□ 0.43
SF1-220ENST00000626028 OR52L2PQ8NGH6 319 aa17.75■□□□□ 0.43
SF1-220ENST00000626028 OR4F4Q96R69 305 aa17.75■□□□□ 0.43
SF1-220ENST00000626028 LIN7CQ9NUP9 197 aaKnown RBP17.75■□□□□ 0.43
SF1-220ENST00000626028 TMEM272A0A1B0GTI8 110 aa17.74■□□□□ 0.43
SF1-220ENST00000626028 IGHG2P01859 326 aa17.74■□□□□ 0.43
SF1-220ENST00000626028 PPP1CCP36873 323 aaKnown RBP17.74■□□□□ 0.43
SF1-220ENST00000626028 GNMTQ14749 295 aa17.74■□□□□ 0.43
SF1-220ENST00000626028 HES5Q5TA89 166 aa17.74■□□□□ 0.43
SF1-220ENST00000626028 C22orf42Q6IC83 251 aa17.74■□□□□ 0.43
SF1-220ENST00000626028 OR4X2Q8NGF9 303 aa17.74■□□□□ 0.43
SF1-220ENST00000626028 FAM110DQ8TAY7 271 aaPredicted RBP17.74■□□□□ 0.43
SF1-220ENST00000626028 CHPT1Q8WUD6 406 aa17.74■□□□□ 0.43
SF1-220ENST00000626028 ARHGAP5-AS1Q96IT6 56 aa17.74■□□□□ 0.43
SF1-220ENST00000626028 CITED2Q99967 270 aaPredicted RBP17.74■□□□□ 0.43
SF1-220ENST00000626028 PECRQ9BY49 303 aa17.74■□□□□ 0.43
SF1-220ENST00000626028 TXNL4BQ9NX01 149 aaKnown RBP17.74■□□□□ 0.43
SF1-220ENST00000626028 SSR3Q9UNL2 185 aa17.74■□□□□ 0.43
SF1-220ENST00000626028 SHISA3A0PJX4 238 aa17.73■□□□□ 0.43
SF1-220ENST00000626028 METTL21EPA6NDL7 271 aa17.73■□□□□ 0.43
SF1-220ENST00000626028 ZBTB25P24278 435 aa17.73■□□□□ 0.43
SF1-220ENST00000626028 GADD45AP24522 165 aa17.73■□□□□ 0.43
SF1-220ENST00000626028 OR10A3P58181 314 aa17.73■□□□□ 0.43
SF1-220ENST00000626028 HNF4GQ14541 408 aa17.73■□□□□ 0.43
SF1-220ENST00000626028 ARL6IP1Q15041 203 aa17.73■□□□□ 0.43
SF1-220ENST00000626028 ODF3L1Q8IXM7 274 aa17.73■□□□□ 0.43
SF1-220ENST00000626028 IL1F10Q8WWZ1 152 aa17.73■□□□□ 0.43
SF1-220ENST00000626028 CMSS1Q9BQ75 279 aaKnown RBP17.73■□□□□ 0.43
SF1-220ENST00000626028 Q9N2K0 584 aa17.73■□□□□ 0.43
SF1-220ENST00000626028 PIPOXQ9P0Z9 390 aa17.73■□□□□ 0.43
SF1-220ENST00000626028 HLA-DRB3P79483 266 aa17.72■□□□□ 0.43
SF1-220ENST00000626028 LSAMPQ13449 338 aa17.72■□□□□ 0.43
SF1-220ENST00000626028 PLAC9Q5JTB6 97 aa17.72■□□□□ 0.43
SF1-220ENST00000626028 C9orf152Q5JTZ5 239 aa17.72■□□□□ 0.43
SF1-220ENST00000626028 Q6ZPA2 131 aa17.72■□□□□ 0.43
SF1-220ENST00000626028 ZNF833PQ6ZTB9 187 aa17.72■□□□□ 0.43
SF1-220ENST00000626028 EDARADDQ8WWZ3 215 aa17.72■□□□□ 0.43
SF1-220ENST00000626028 RAB3CQ96E17 227 aa17.72■□□□□ 0.43
SF1-220ENST00000626028 CYYR1Q96J86 154 aa17.72■□□□□ 0.43
SF1-220ENST00000626028 CENPOQ9BU64 300 aa17.72■□□□□ 0.43
SF1-220ENST00000626028 ABCG5Q9H222 651 aa17.72■□□□□ 0.43
SF1-220ENST00000626028 SLC23A1Q9UHI7 598 aa17.72■□□□□ 0.43
SF1-220ENST00000626028 IGHV3-72A0A0B4J1Y9 119 aa17.71■□□□□ 0.43
SF1-220ENST00000626028 NCBP2LA6PVI3 153 aaKnown RBP17.71■□□□□ 0.43
SF1-220ENST00000626028 NOTOA8MTQ0 251 aa17.71■□□□□ 0.43
SF1-220ENST00000626028 ADARB2-AS1A8MUL3 147 aa17.71■□□□□ 0.43
SF1-220ENST00000626028 RAB29O14966 203 aa17.71■□□□□ 0.43
SF1-220ENST00000626028 KCNAB3O43448 404 aa17.71■□□□□ 0.43
SF1-220ENST00000626028 DIRAS3O95661 229 aa17.71■□□□□ 0.43
SF1-220ENST00000626028 MRPS15P82914 257 aaKnown RBP17.71■□□□□ 0.43
SF1-220ENST00000626028 FOXRED2Q8IWF2 684 aa17.71■□□□□ 0.43
SF1-220ENST00000626028 Q8N9W7 124 aa17.71■□□□□ 0.43
SF1-220ENST00000626028 SETD6Q8TBK2 473 aa17.71■□□□□ 0.43
SF1-220ENST00000626028 PLSCR3Q9NRY6 295 aa17.71■□□□□ 0.43
SF1-220ENST00000626028 TSSC4Q9Y5U2 329 aaPredicted RBP17.71■□□□□ 0.43
SF1-220ENST00000626028 PSMB11A5LHX3 300 aa17.7■□□□□ 0.42
SF1-220ENST00000626028 SERPINE3A8MV23 424 aa17.7■□□□□ 0.42
SF1-220ENST00000626028 SERPINB10P48595 397 aa17.7■□□□□ 0.42
SF1-220ENST00000626028 SLC35E3Q7Z769 313 aa17.7■□□□□ 0.42
SF1-220ENST00000626028 COMMD1Q8N668 190 aa17.7■□□□□ 0.42
SF1-220ENST00000626028 OR10R2Q8NGX6 335 aa17.7■□□□□ 0.42
SF1-220ENST00000626028 S1PR3Q99500 378 aa17.7■□□□□ 0.42
SF1-220ENST00000626028 GON7Q9BXV9 100 aa17.7■□□□□ 0.42
SF1-220ENST00000626028 IFI27L2Q9H2X8 130 aa17.7■□□□□ 0.42
SF1-220ENST00000626028 TRDCB7Z8K6 153 aa17.69■□□□□ 0.42
SF1-220ENST00000626028 RAB27BO00194 218 aa17.69■□□□□ 0.42
SF1-220ENST00000626028 CD3GP09693 182 aa17.69■□□□□ 0.42
SF1-220ENST00000626028 SRSF7Q16629 238 aaKnown RBP eCLIP17.69■□□□□ 0.426e-7■□□□□ 8.9
SF1-220ENST00000626028 NSUN5P1Q3KNT7 163 aa17.69■□□□□ 0.42
SF1-220ENST00000626028 NR2C2APQ86WQ0 139 aa17.69■□□□□ 0.42
SF1-220ENST00000626028 FAM71E2Q8N5Q1 922 aa17.69■□□□□ 0.42
SF1-220ENST00000626028 RASL11BQ9BPW5 248 aa17.69■□□□□ 0.42
SF1-220ENST00000626028 HDHD3Q9BSH5 251 aaPredicted RBP17.69■□□□□ 0.42
SF1-220ENST00000626028 ZNF580Q9UK33 172 aa17.69■□□□□ 0.42
SF1-220ENST00000626028 KCNK7Q9Y2U2 307 aa17.69■□□□□ 0.42
SF1-220ENST00000626028 SAA2-SAA4A0A096LPE2 208 aa17.68■□□□□ 0.42
SF1-220ENST00000626028 TCRBV4S1A1TA0A5B7 111 aa17.68■□□□□ 0.42
SF1-220ENST00000626028 SH2D7A6NKC9 451 aaPredicted RBP17.68■□□□□ 0.42
SF1-220ENST00000626028 AP4M1O00189 453 aa17.68■□□□□ 0.42
SF1-220ENST00000626028 SCGNO76038 276 aa17.68■□□□□ 0.42
SF1-220ENST00000626028 SAA2P0DJI9 122 aaPredicted RBP17.68■□□□□ 0.42
SF1-220ENST00000626028 SLC6A1P30531 599 aa17.68■□□□□ 0.42
SF1-220ENST00000626028 SCAND1P57086 179 aa17.68■□□□□ 0.42
SF1-220ENST00000626028 SLC35B1P78383 322 aa17.68■□□□□ 0.42
SF1-220ENST00000626028 KIR2DS1Q14954 304 aa17.68■□□□□ 0.42
SF1-220ENST00000626028 TCTEX1D4Q5JR98 221 aa17.68■□□□□ 0.42
SF1-220ENST00000626028 OR4A4PQ8NGN8 299 aa17.68■□□□□ 0.42
SF1-220ENST00000626028 R3HDM4Q96D70 268 aa17.68■□□□□ 0.42
SF1-220ENST00000626028 KCTD7Q96MP8 289 aa17.68■□□□□ 0.42
SF1-220ENST00000626028 AGMATQ9BSE5 352 aa17.68■□□□□ 0.42
SF1-220ENST00000626028 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.68■□□□□ 0.42
SF1-220ENST00000626028 NOTCH3Q9UM47 2321 aa17.68■□□□□ 0.42
SF1-220ENST00000626028 ZNF736B4DX44 427 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms