RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 ITGB1BP1O14713 200 aa9.2□□□□□ -0.94
CCDC12-209ENST00000604164 RAB29O14966 203 aa9.2□□□□□ -0.94
CCDC12-209ENST00000604164 HSPA12AO43301 675 aa9.2□□□□□ -0.94
CCDC12-209ENST00000604164 CD3GP09693 182 aa9.2□□□□□ -0.94
CCDC12-209ENST00000604164 ZBTB25P24278 435 aa9.2□□□□□ -0.94
CCDC12-209ENST00000604164 PPP1CCP36873 323 aaKnown RBP9.2□□□□□ -0.94
CCDC12-209ENST00000604164 SERPINB10P48595 397 aa9.2□□□□□ -0.94
CCDC12-209ENST00000604164 ZNF134P52741 427 aa9.2□□□□□ -0.94
CCDC12-209ENST00000604164 OR10A3P58181 314 aa9.2□□□□□ -0.94
CCDC12-209ENST00000604164 HNF4GQ14541 408 aa9.2□□□□□ -0.94
CCDC12-209ENST00000604164 TIMM50Q3ZCQ8 353 aa9.2□□□□□ -0.94
CCDC12-209ENST00000604164 FOXRED2Q8IWF2 684 aa9.2□□□□□ -0.94
CCDC12-209ENST00000604164 C5orf56Q8N8D9 126 aa9.2□□□□□ -0.94
CCDC12-209ENST00000604164 OR4F17Q8NGA8 305 aa9.2□□□□□ -0.94
CCDC12-209ENST00000604164 OR5AU1Q8NGC0 362 aa9.2□□□□□ -0.94
CCDC12-209ENST00000604164 OR52L2PQ8NGH6 319 aa9.2□□□□□ -0.94
CCDC12-209ENST00000604164 CHPT1Q8WUD6 406 aa9.2□□□□□ -0.94
CCDC12-209ENST00000604164 ARHGAP5-AS1Q96IT6 56 aa9.2□□□□□ -0.94
CCDC12-209ENST00000604164 EAF1Q96JC9 268 aaPredicted RBP9.2□□□□□ -0.94
CCDC12-209ENST00000604164 KCTD7Q96MP8 289 aa9.2□□□□□ -0.94
CCDC12-209ENST00000604164 OR4F4Q96R69 305 aa9.2□□□□□ -0.94
CCDC12-209ENST00000604164 S1PR3Q99500 378 aa9.2□□□□□ -0.94
CCDC12-209ENST00000604164 GON7Q9BXV9 100 aa9.2□□□□□ -0.94
CCDC12-209ENST00000604164 PIPOXQ9P0Z9 390 aa9.2□□□□□ -0.94
CCDC12-209ENST00000604164 TET2Q6N021 2002 aaPredicted RBP9.19□□□□□ -0.94
CCDC12-209ENST00000604164 FOXI3A8MTJ6 420 aaPredicted RBP9.19□□□□□ -0.94
CCDC12-209ENST00000604164 SLC31A2O15432 143 aa9.19□□□□□ -0.94
CCDC12-209ENST00000604164 KCNAB3O43448 404 aa9.19□□□□□ -0.94
CCDC12-209ENST00000604164 TMEM127O75204 238 aa9.19□□□□□ -0.94
CCDC12-209ENST00000604164 TNFAIP8O95379 198 aa9.19□□□□□ -0.94
CCDC12-209ENST00000604164 AMY1AP04745 511 aa9.19□□□□□ -0.94
CCDC12-209ENST00000604164 AMY2AP04746 511 aa9.19□□□□□ -0.94
CCDC12-209ENST00000604164 TMEM50BP56557 158 aa9.19□□□□□ -0.94
CCDC12-209ENST00000604164 SCAND1P57086 179 aa9.19□□□□□ -0.94
CCDC12-209ENST00000604164 SLC35B1P78383 322 aa9.19□□□□□ -0.94
CCDC12-209ENST00000604164 HLA-DRB3P79483 266 aa9.19□□□□□ -0.94
CCDC12-209ENST00000604164 GNMTQ14749 295 aa9.19□□□□□ -0.94
CCDC12-209ENST00000604164 KIR2DS1Q14954 304 aa9.19□□□□□ -0.94
CCDC12-209ENST00000604164 Q6ZS46 218 aa9.19□□□□□ -0.94
CCDC12-209ENST00000604164 C11orf44Q8N8P7 122 aa9.19□□□□□ -0.94
CCDC12-209ENST00000604164 OR10R2Q8NGX6 335 aa9.19□□□□□ -0.94
CCDC12-209ENST00000604164 FAM110DQ8TAY7 271 aaPredicted RBP9.19□□□□□ -0.94
CCDC12-209ENST00000604164 WIPF2Q8TF74 440 aaPredicted RBP9.19□□□□□ -0.94
CCDC12-209ENST00000604164 RASL11BQ9BPW5 248 aa9.19□□□□□ -0.94
CCDC12-209ENST00000604164 Q9N2K0 584 aa9.19□□□□□ -0.94
CCDC12-209ENST00000604164 LIN7CQ9NUP9 197 aaKnown RBP9.19□□□□□ -0.94
CCDC12-209ENST00000604164 SLC23A1Q9UHI7 598 aa9.19□□□□□ -0.94
CCDC12-209ENST00000604164 A0A087WXM4 84 aa9.18□□□□□ -0.94
CCDC12-209ENST00000604164 IGHV3-72A0A0B4J1Y9 119 aa9.18□□□□□ -0.94
CCDC12-209ENST00000604164 SHISA3A0PJX4 238 aa9.18□□□□□ -0.94
CCDC12-209ENST00000604164 TRDCB7Z8K6 153 aa9.18□□□□□ -0.94
CCDC12-209ENST00000604164 DIRAS3O95661 229 aa9.18□□□□□ -0.94
CCDC12-209ENST00000604164 TSPAN15O95858 294 aa9.18□□□□□ -0.94
CCDC12-209ENST00000604164 CD28P10747 220 aa9.18□□□□□ -0.94
CCDC12-209ENST00000604164 HIST1H1DP16402 221 aaKnown RBP9.18□□□□□ -0.94
CCDC12-209ENST00000604164 CD36P16671 472 aa9.18□□□□□ -0.94
CCDC12-209ENST00000604164 TALDO1P37837 337 aa9.18□□□□□ -0.94
CCDC12-209ENST00000604164 LSAMPQ13449 338 aa9.18□□□□□ -0.94
CCDC12-209ENST00000604164 NEDD8Q15843 81 aa9.18□□□□□ -0.94
CCDC12-209ENST00000604164 TMEM95Q3KNT9 176 aa9.18□□□□□ -0.94
CCDC12-209ENST00000604164 SLC35E3Q7Z769 313 aa9.18□□□□□ -0.94
CCDC12-209ENST00000604164 COMMD1Q8N668 190 aa9.18□□□□□ -0.94
CCDC12-209ENST00000604164 Q8N6K4 173 aa9.18□□□□□ -0.94
CCDC12-209ENST00000604164 OR4A4PQ8NGN8 299 aa9.18□□□□□ -0.94
CCDC12-209ENST00000604164 PHF21AQ96BD5 680 aa9.18□□□□□ -0.94
CCDC12-209ENST00000604164 ATG5Q9H1Y0 275 aa9.18□□□□□ -0.94
CCDC12-209ENST00000604164 TSSC4Q9Y5U2 329 aaPredicted RBP9.18□□□□□ -0.94
CCDC12-209ENST00000604164 LOC100506127A0A0U1RQW1 187 aa9.17□□□□□ -0.94
CCDC12-209ENST00000604164 TCRBV4S1A1TA0A5B7 111 aa9.17□□□□□ -0.94
CCDC12-209ENST00000604164 PSMB11A5LHX3 300 aa9.17□□□□□ -0.94
CCDC12-209ENST00000604164 AP4M1O00189 453 aa9.17□□□□□ -0.94
CCDC12-209ENST00000604164 RRP9O43818 475 aaKnown RBP9.17□□□□□ -0.94
CCDC12-209ENST00000604164 IGHG2P01859 326 aa9.17□□□□□ -0.94
CCDC12-209ENST00000604164 MC5RP33032 325 aa9.17□□□□□ -0.94
CCDC12-209ENST00000604164 CEACAM6P40199 344 aa9.17□□□□□ -0.94
CCDC12-209ENST00000604164 PITPNAQ00169 270 aa9.17□□□□□ -0.94
CCDC12-209ENST00000604164 CD83Q01151 205 aa9.17□□□□□ -0.94
CCDC12-209ENST00000604164 ARFRP1Q13795 201 aa9.17□□□□□ -0.94
CCDC12-209ENST00000604164 SRSF7Q16629 238 aaKnown RBP eCLIP9.17□□□□□ -0.94
CCDC12-209ENST00000604164 NSUN5P1Q3KNT7 163 aa9.17□□□□□ -0.94
CCDC12-209ENST00000604164 PLAC9Q5JTB6 97 aa9.17□□□□□ -0.94
CCDC12-209ENST00000604164 FAM53AQ6NSI3 398 aaPredicted RBP9.17□□□□□ -0.94
CCDC12-209ENST00000604164 ZNF833PQ6ZTB9 187 aa9.17□□□□□ -0.94
CCDC12-209ENST00000604164 CROCCP3Q8IVE0 287 aa9.17□□□□□ -0.94
CCDC12-209ENST00000604164 TSPAN14Q8NG11 270 aa9.17□□□□□ -0.94
CCDC12-209ENST00000604164 CITED2Q99967 270 aaPredicted RBP9.17□□□□□ -0.94
CCDC12-209ENST00000604164 CHCHD6Q9BRQ6 235 aa9.17□□□□□ -0.94
CCDC12-209ENST00000604164 HDHD3Q9BSH5 251 aaPredicted RBP9.17□□□□□ -0.94
CCDC12-209ENST00000604164 ABCG5Q9H222 651 aa9.17□□□□□ -0.94
CCDC12-209ENST00000604164 DAPK2Q9UIK4 370 aa9.17□□□□□ -0.94
CCDC12-209ENST00000604164 ZNF221Q9UK13 617 aa9.17□□□□□ -0.94
CCDC12-209ENST00000604164 SAA2-SAA4A0A096LPE2 208 aa9.16□□□□□ -0.94
CCDC12-209ENST00000604164 OR5H14A6NHG9 310 aa9.16□□□□□ -0.94
CCDC12-209ENST00000604164 RAB27BO00194 218 aa9.16□□□□□ -0.94
CCDC12-209ENST00000604164 MFNGO00587 321 aa9.16□□□□□ -0.94
CCDC12-209ENST00000604164 FCGR3AP08637 254 aa9.16□□□□□ -0.94
CCDC12-209ENST00000604164 SAA2P0DJI9 122 aaPredicted RBP9.16□□□□□ -0.94
CCDC12-209ENST00000604164 GNB3P16520 340 aa9.16□□□□□ -0.94
CCDC12-209ENST00000604164 SLC6A1P30531 599 aa9.16□□□□□ -0.94
CCDC12-209ENST00000604164 SDC2P34741 201 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms