RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 APLNRP35414 380 aa13.99□□□□□ -0.17
LIG1-206ENST00000594067 RNPS1Q15287 305 aaKnown RBP13.99□□□□□ -0.17
LIG1-206ENST00000594067 REC114Q7Z4M0 266 aa13.99□□□□□ -0.17
LIG1-206ENST00000594067 LINC00596Q86U02 117 aa13.99□□□□□ -0.17
LIG1-206ENST00000594067 VSIRQ9H7M9 311 aa13.99□□□□□ -0.17
LIG1-206ENST00000594067 SDF2L1Q9HCN8 221 aa13.99□□□□□ -0.17
LIG1-206ENST00000594067 A0A1B0GV90 55 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 BCL2P10415 239 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 ACP1P24666 158 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 DDTP30046 118 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 PKIAP61925 76 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 DBX2Q6ZNG2 339 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 MCEMP1Q8IX19 187 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 HIST1H2BLQ99880 126 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 SSX3Q99909 188 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 CABLES2Q9BTV7 478 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 RBM7Q9Y580 266 aaKnown RBP13.98□□□□□ -0.17
LIG1-206ENST00000594067 MPC1Q9Y5U8 109 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 AHCTF1Q8WYP5 2266 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 TRBV24-1A0A075B6N3 115 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 SIRPB1O00241 398 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 IGLV2-14P01704 120 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 METTL15P1P0C7V9 234 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 ARL16Q0P5N6 197 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 ZNF726P1Q15940 193 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 SSX9Q7RTT3 188 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 CA5BP1Q8WTZ4 195 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 MEGF10Q96KG7 1140 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 PACRGQ96M98 296 aaPredicted RBP13.98□□□□□ -0.17
LIG1-206ENST00000594067 RAB40CQ96S21 281 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 OR51I2Q9H344 312 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 PRO1933Q9H354 126 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 PRO3102Q9H379 93 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 FOXJ2Q9P0K8 574 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 DOCK7Q96N67 2140 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 MUC3AQ02505 3323 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 OR5B21A6NL26 309 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 C9orf172C9J069 976 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 TGOLN2O43493 480 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 RNF224P0DH78 156 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 LCN15Q6UWW0 184 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 KCNS2Q9ULS6 477 aa13.98□□□□□ -0.17
LIG1-206ENST00000594067 IGHV3-64DA0A0J9YX35 117 aa13.97□□□□□ -0.17
LIG1-206ENST00000594067 SYNGR2O43760 224 aa13.97□□□□□ -0.17
LIG1-206ENST00000594067 TESK1Q15569 626 aa13.97□□□□□ -0.17
LIG1-206ENST00000594067 ZNF787Q6DD87 383 aa13.97□□□□□ -0.17
LIG1-206ENST00000594067 Q6P435 159 aa13.97□□□□□ -0.17
LIG1-206ENST00000594067 SSX7Q7RTT5 188 aa13.97□□□□□ -0.17
LIG1-206ENST00000594067 MYPOPQ86VE0 399 aaPredicted RBP13.97□□□□□ -0.17
LIG1-206ENST00000594067 SCGB1C1Q8TD33 95 aa13.97□□□□□ -0.17
LIG1-206ENST00000594067 MBD3L1Q8WWY6 194 aa13.97□□□□□ -0.17
LIG1-206ENST00000594067 PSENENQ9NZ42 101 aa13.97□□□□□ -0.17
LIG1-206ENST00000594067 MT-CO3P00414 261 aa13.97□□□□□ -0.17
LIG1-206ENST00000594067 IGKV1-5P01602 117 aa13.97□□□□□ -0.17
LIG1-206ENST00000594067 IL2RGP31785 369 aa13.97□□□□□ -0.17
LIG1-206ENST00000594067 FGF8P55075 233 aaPredicted RBP13.97□□□□□ -0.17
LIG1-206ENST00000594067 CLN3Q13286 438 aa13.97□□□□□ -0.17
LIG1-206ENST00000594067 FAM180AQ6UWF9 173 aa13.97□□□□□ -0.17
LIG1-206ENST00000594067 SNX22Q96L94 193 aa13.97□□□□□ -0.17
LIG1-206ENST00000594067 CDH20Q9HBT6 801 aa13.97□□□□□ -0.17
LIG1-206ENST00000594067 DNAJC13O75165 2243 aa13.97□□□□□ -0.17
LIG1-206ENST00000594067 COL6A3P12111 3177 aa13.96□□□□□ -0.17
LIG1-206ENST00000594067 A0A087X0M5 115 aa13.96□□□□□ -0.17
LIG1-206ENST00000594067 A0A1B0GX30 115 aa13.96□□□□□ -0.17
LIG1-206ENST00000594067 A0A1W2PR80 420 aa13.96□□□□□ -0.17
LIG1-206ENST00000594067 SLC25A6P12236 298 aa13.96□□□□□ -0.17
LIG1-206ENST00000594067 MDKP21741 143 aaPredicted RBP13.96□□□□□ -0.17
LIG1-206ENST00000594067 PITPNC1Q9UKF7 332 aa13.96□□□□□ -0.17
LIG1-206ENST00000594067 TRAPPC2LQ9UL33 140 aa13.96□□□□□ -0.17
LIG1-206ENST00000594067 WDR1O75083 606 aa13.96□□□□□ -0.18
LIG1-206ENST00000594067 PAX1P15863 534 aa13.96□□□□□ -0.18
LIG1-206ENST00000594067 HAPLN4Q86UW8 402 aa13.96□□□□□ -0.18
LIG1-206ENST00000594067 MDP1Q86V88 176 aa13.96□□□□□ -0.18
LIG1-206ENST00000594067 OR1K1Q8NGR3 316 aa13.96□□□□□ -0.18
LIG1-206ENST00000594067 CDX2Q99626 313 aaPredicted RBP13.96□□□□□ -0.18
LIG1-206ENST00000594067 SPRY4Q9C004 299 aa13.96□□□□□ -0.18
LIG1-206ENST00000594067 PKIBQ9C010 78 aa13.96□□□□□ -0.18
LIG1-206ENST00000594067 STRADBQ9C0K7 418 aa13.96□□□□□ -0.18
LIG1-206ENST00000594067 TSTD3H0UI37 97 aa13.95□□□□□ -0.18
LIG1-206ENST00000594067 J3QT63 122 aa13.95□□□□□ -0.18
LIG1-206ENST00000594067 IL18BPO95998 194 aa13.95□□□□□ -0.18
LIG1-206ENST00000594067 IFNA10P01566 189 aa13.95□□□□□ -0.18
LIG1-206ENST00000594067 OPN1MWP04001 364 aa13.95□□□□□ -0.18
LIG1-206ENST00000594067 OPN1MW2P0DN77 364 aa13.95□□□□□ -0.18
LIG1-206ENST00000594067 OPN1MW3P0DN78 364 aa13.95□□□□□ -0.18
LIG1-206ENST00000594067 WDR86Q86TI4 376 aa13.95□□□□□ -0.18
LIG1-206ENST00000594067 ZNF525Q8N782 197 aa13.95□□□□□ -0.18
LIG1-206ENST00000594067 ZPBPQ9BS86 351 aa13.95□□□□□ -0.18
LIG1-206ENST00000594067 OR14J1Q9UGF5 321 aa13.95□□□□□ -0.18
LIG1-206ENST00000594067 FAM186AA6NE01 2351 aa13.95□□□□□ -0.18
LIG1-206ENST00000594067 OR2H2O95918 312 aa13.95□□□□□ -0.18
LIG1-206ENST00000594067 ZNF585BQ52M93 769 aa13.95□□□□□ -0.18
LIG1-206ENST00000594067 OR4X1Q8NH49 305 aa13.95□□□□□ -0.18
LIG1-206ENST00000594067 LSM10Q969L4 123 aaKnown RBP13.95□□□□□ -0.18
LIG1-206ENST00000594067 P2RX4Q99571 388 aa13.95□□□□□ -0.18
LIG1-206ENST00000594067 ABI3Q9P2A4 366 aa13.95□□□□□ -0.18
LIG1-206ENST00000594067 FRYQ5TBA9 3013 aa13.94□□□□□ -0.18
LIG1-206ENST00000594067 SMCO3A2RU48 225 aa13.94□□□□□ -0.18
LIG1-206ENST00000594067 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.94□□□□□ -0.18
LIG1-206ENST00000594067 DCAF10Q5QP82 559 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms