RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 SYT6Q5T7P8 510 aaPredicted RBP3.59□□□□□ -1.83
SMAD4-216ENST00000593223 EPGNQ6UW88 154 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 RASSF6Q6ZTQ3 369 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 GRINAQ7Z429 371 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 PIANPQ8IYJ0 282 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 OR8J3Q8NGG0 315 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 OR5AR1Q8NGP9 310 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 OR4X1Q8NH49 305 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 MCFD2Q8NI22 146 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 GTSF1Q8WW33 167 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 RGP1Q92546 391 aaPredicted RBP3.59□□□□□ -1.83
SMAD4-216ENST00000593223 DYNLL2Q96FJ2 89 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 MRPL48Q96GC5 212 aaKnown RBP3.59□□□□□ -1.83
SMAD4-216ENST00000593223 UBE2E2Q96LR5 201 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 SIGLEC12Q96PQ1 595 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 C12orf57Q99622 126 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 ARHGDIGQ99819 225 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 FAM96AQ9H5X1 160 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 KCNJ16Q9NPI9 418 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 HEBP1Q9NRV9 189 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 RBM22Q9NW64 420 aaKnown RBP eCLIP3.59□□□□□ -1.83
SMAD4-216ENST00000593223 SPANXCQ9NY87 97 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 OR1A1Q9P1Q5 309 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 PTPRBP23467 1997 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 CABIN1Q9Y6J0 2220 aa3.59□□□□□ -1.84
SMAD4-216ENST00000593223 PARP14Q460N5 1801 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 MYH7BA7E2Y1 1941 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 C2orf16Q68DN1 1984 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 A0A1B0GV90 55 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 PVALEFA0A1B0GWK0 134 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 PQLC2LA1A4F0 135 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 ATG12O94817 140 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 GPR75O95800 540 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 LY6G6DO95868 133 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 IFNGP01579 166 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 CRYGDP07320 174 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 CD55P08174 381 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 RBP1P09455 135 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 KRTAP1-4P0C5Y4 121 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 USF1P22415 310 aaPredicted RBP3.58□□□□□ -1.84
SMAD4-216ENST00000593223 OMGP23515 440 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 AK4P27144 223 aaPredicted RBP3.58□□□□□ -1.84
SMAD4-216ENST00000593223 GPX4P36969 197 aaPredicted RBP3.58□□□□□ -1.84
SMAD4-216ENST00000593223 GALR1P47211 349 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 OR3A4PP47883 348 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 OR1E2P47887 323 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 RAB13P51153 203 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 GPM6AP51674 278 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 LIM2P55344 173 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 RAB5BP61020 215 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 IGFBP7Q16270 282 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 SMIM21Q3B7S5 101 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 PARP15Q460N3 678 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 PRR30Q53SZ7 412 aaPredicted RBP3.58□□□□□ -1.84
SMAD4-216ENST00000593223 TMEM205Q6UW68 189 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 PAMR1Q6UXH9 720 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 TOMM20LQ6UXN7 152 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 COMMD7Q86VX2 200 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 CADM2Q8N3J6 435 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 LRRC18Q8N456 261 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 SMIM20Q8N5G0 67 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 EIF4E3Q8N5X7 224 aaKnown RBP3.58□□□□□ -1.84
SMAD4-216ENST00000593223 ZNF439Q8NDP4 499 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 OR9A2Q8NGT5 310 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 OR4K15Q8NH41 348 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 ARPC1AQ92747 370 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 L3HYPDHQ96EM0 354 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 CMTM7Q96FZ5 175 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 PAGE5Q96GU1 130 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 PYURFQ96I23 114 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 OR5M11Q96RB7 305 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 PLEKHF1Q96S99 279 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 P2RX4Q99571 388 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 C20orf144Q9BQM9 153 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 TCEAL7Q9BRU2 100 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 MED18Q9BUE0 208 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 DCSTAMPQ9H295 470 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 OR51I1Q9H343 314 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 VSIRQ9H7M9 311 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 DNAJC27Q9NZQ0 273 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 OPTCQ9UBM4 332 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.58□□□□□ -1.84
SMAD4-216ENST00000593223 PRELID3BQ9Y3B1 194 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 ASB4Q9Y574 426 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 APCP25054 2843 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 SPAG17Q6Q759 2223 aa3.58□□□□□ -1.84
SMAD4-216ENST00000593223 CSMD2Q7Z408 3487 aa3.57□□□□□ -1.84
SMAD4-216ENST00000593223 MANBAO00462 879 aa3.57□□□□□ -1.84
SMAD4-216ENST00000593223 ORC5O43913 435 aa3.57□□□□□ -1.84
SMAD4-216ENST00000593223 CLUHO75153 1309 aa3.57□□□□□ -1.84
SMAD4-216ENST00000593223 FOXH1O75593 365 aa3.57□□□□□ -1.84
SMAD4-216ENST00000593223 UPK1BO75841 260 aa3.57□□□□□ -1.84
SMAD4-216ENST00000593223 KLF8O95600 359 aaPredicted RBP3.57□□□□□ -1.84
SMAD4-216ENST00000593223 LALBAP00709 142 aa3.57□□□□□ -1.84
SMAD4-216ENST00000593223 PDYNP01213 254 aa3.57□□□□□ -1.84
SMAD4-216ENST00000593223 IFNA10P01566 189 aa3.57□□□□□ -1.84
SMAD4-216ENST00000593223 IGHV3-9P01782 118 aa3.57□□□□□ -1.84
SMAD4-216ENST00000593223 KLK3P07288 261 aaPredicted RBP3.57□□□□□ -1.84
SMAD4-216ENST00000593223 FBP1P09467 338 aa3.57□□□□□ -1.84
SMAD4-216ENST00000593223 SULT1A3P0DMM9 295 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms