RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 SPINT2O43291 252 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 ORC5O43913 435 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 IGHV3-7P01780 117 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 BRS3P32247 399 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 GNG10P50151 68 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 DYNLT3P51808 116 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 QRFPP83859 136 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 UNC119Q13432 240 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 C2orf76Q3KRA6 126 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 SIGIRRQ6IA17 410 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 CCDC144NLQ6NUI1 221 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 TRAT1Q6PIZ9 186 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 Q6ZSV7 163 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 OR2W3Q7Z3T1 314 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 OR4C13Q8NGP0 309 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 OR4K15Q8NH41 348 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 LINC01006Q8NI28 216 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 PIFOQ8TCI5 191 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 LEAP2Q969E1 77 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 PTX4Q96A99 478 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 CMTM3Q96MX0 182 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 NPFFR1Q9GZQ6 430 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 MMP28Q9H239 520 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 KCNIP1Q9NZI2 227 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 COMMD3Q9UBI1 195 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 TCF19Q9Y242 345 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 RNF114Q9Y508 228 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 TENM1Q9UKZ4 2725 aa8.35□□□□□ -1.07
SDF2-208ENST00000589788 TMEM272A0A1B0GTI8 110 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 OOSP1A8MZH6 123 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 CTDSP2O14595 271 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 RGS5O15539 181 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 TSPAN9O75954 239 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 CHATP28329 748 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 BLVRBP30043 206 aaPredicted RBP8.34□□□□□ -1.07
SDF2-208ENST00000589788 S100A5P33763 92 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 MNDAP41218 407 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 MADCAM1Q13477 382 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 UBE2NLQ5JXB2 153 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 UTF1Q5T230 341 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 TPTE2P1Q5T6R2 138 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 TMEM219Q86XT9 240 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 LAX1Q8IWV1 398 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 PRR18Q8N4B5 295 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 SAMD12Q8N8I0 201 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 DTX3Q8N9I9 347 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 OR52M1Q8NGK5 317 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 OR6Q1Q8NGQ2 317 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 OR5H6Q8NGV6 325 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 OR10X1Q8NGY0 326 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 UBALD1Q8TB05 177 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 CAPSLQ8WWF8 208 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 TOMM40LQ969M1 308 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 RPEQ96AT9 228 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 SULT4A1Q9BR01 284 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 NICN1Q9BSH3 213 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 TM2D1Q9BX74 207 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 C16orf95Q9H693 158 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 PLEKHJ1Q9NW61 149 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 PSG11Q9UQ72 335 aa8.34□□□□□ -1.07
SDF2-208ENST00000589788 IGHV3-43A0A0B4J1X8 118 aa8.33□□□□□ -1.08
SDF2-208ENST00000589788 A6NDX4 124 aa8.33□□□□□ -1.08
SDF2-208ENST00000589788 C12orf77C9JDV5 145 aa8.33□□□□□ -1.08
SDF2-208ENST00000589788 C15orf65H3BRN8 121 aa8.33□□□□□ -1.08
SDF2-208ENST00000589788 CHST1O43916 411 aa8.33□□□□□ -1.08
SDF2-208ENST00000589788 HPGDSO60760 199 aa8.33□□□□□ -1.08
SDF2-208ENST00000589788 APOA1P02647 267 aa8.33□□□□□ -1.08
SDF2-208ENST00000589788 IGHV3-43DP0DP04 118 aa8.33□□□□□ -1.08
SDF2-208ENST00000589788 TMEM30BQ3MIR4 351 aa8.33□□□□□ -1.08
SDF2-208ENST00000589788 C6orf201Q7Z4U5 140 aa8.33□□□□□ -1.08
SDF2-208ENST00000589788 GAPTQ8N292 157 aa8.33□□□□□ -1.08
SDF2-208ENST00000589788 OR2T6Q8NHC8 308 aa8.33□□□□□ -1.08
SDF2-208ENST00000589788 SGMS2Q8NHU3 365 aa8.33□□□□□ -1.08
SDF2-208ENST00000589788 SLC25A38Q96DW6 304 aa8.33□□□□□ -1.08
SDF2-208ENST00000589788 FAAP24Q9BTP7 215 aa8.33□□□□□ -1.08
SDF2-208ENST00000589788 LPAR5Q9H1C0 372 aa8.33□□□□□ -1.08
SDF2-208ENST00000589788 ABCG5Q9H222 651 aa8.33□□□□□ -1.08
SDF2-208ENST00000589788 MIXL1Q9H2W2 232 aa8.33□□□□□ -1.08
SDF2-208ENST00000589788 RANBP3Q9H6Z4 567 aaPredicted RBP8.33□□□□□ -1.08
SDF2-208ENST00000589788 CHMP1AQ9HD42 196 aaPredicted RBP8.33□□□□□ -1.08
SDF2-208ENST00000589788 RHBDL2Q9NX52 303 aa8.33□□□□□ -1.08
SDF2-208ENST00000589788 GNG12Q9UBI6 72 aa8.33□□□□□ -1.08
SDF2-208ENST00000589788 RAB22AQ9UL26 194 aa8.33□□□□□ -1.08
SDF2-208ENST00000589788 A0A1W2PPE3 182 aa8.32□□□□□ -1.08
SDF2-208ENST00000589788 LY6LH3BQJ8 138 aa8.32□□□□□ -1.08
SDF2-208ENST00000589788 SOCS1O15524 211 aa8.32□□□□□ -1.08
SDF2-208ENST00000589788 HBZP02008 142 aa8.32□□□□□ -1.08
SDF2-208ENST00000589788 EIF4EP06730 217 aaKnown RBP8.32□□□□□ -1.08
SDF2-208ENST00000589788 RCC1P18754 421 aaPredicted RBP8.32□□□□□ -1.08
SDF2-208ENST00000589788 ELK1P19419 428 aa8.32□□□□□ -1.08
SDF2-208ENST00000589788 IL3RAP26951 378 aa8.32□□□□□ -1.08
SDF2-208ENST00000589788 TNFSF8P32971 234 aa8.32□□□□□ -1.08
SDF2-208ENST00000589788 EFNB2P52799 333 aa8.32□□□□□ -1.08
SDF2-208ENST00000589788 CCBE1Q6UXH8 406 aaPredicted RBP8.32□□□□□ -1.08
SDF2-208ENST00000589788 ZNF554Q86TJ5 538 aa8.32□□□□□ -1.08
SDF2-208ENST00000589788 OR1L1Q8NH94 360 aa8.32□□□□□ -1.08
SDF2-208ENST00000589788 SETD6Q8TBK2 473 aa8.32□□□□□ -1.08
SDF2-208ENST00000589788 MRPL30Q8TCC3 161 aaKnown RBP8.32□□□□□ -1.08
SDF2-208ENST00000589788 AKR1E2Q96JD6 320 aa8.32□□□□□ -1.08
SDF2-208ENST00000589788 TAF9BQ9HBM6 251 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms