RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 MRPL16Q9NX20 251 aaKnown RBP1.55□□□□□ -2.16
SMAD4-207ENST00000589076 GMEB1Q9Y692 573 aa1.55□□□□□ -2.16
SMAD4-207ENST00000589076 COL18A1P39060 1754 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 DSCAML1Q8TD84 2053 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 SONP18583 2426 aaKnown RBP1.54□□□□□ -2.16
SMAD4-207ENST00000589076 LINC00854A0A1B0GVQ3 168 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 TMEM213A2RRL7 107 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 B4DEV8 164 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 F8VZ95 297 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 KLRC4-KLRK1H3BQV0 150 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 J3QLI3 93 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 TP53I11O14683 189 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 SLC25A20O43772 301 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 ZNF73O43830 326 aaPredicted RBP1.54□□□□□ -2.16
SMAD4-207ENST00000589076 MPZL2O60487 215 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 PVALBP20472 110 aaPredicted RBP1.54□□□□□ -2.16
SMAD4-207ENST00000589076 PSMA1P25786 263 aaKnown RBP1.54□□□□□ -2.16
SMAD4-207ENST00000589076 GABRA3P34903 492 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 KRTAP12-4P60329 112 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 TSPAN31Q12999 210 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 PMS2P3Q13401 168 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 OR8G1Q15617 311 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 SPIN4Q56A73 249 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 HES3Q5TGS1 186 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 NIPAL1Q6NVV3 410 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 NOXRED1Q6NXP6 359 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 SCXQ7RTU7 201 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 KRTAP13-1Q8IUC0 172 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 OR10D4PQ8NGN7 298 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 OR5K1Q8NHB7 308 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 PHOSPHO2Q8TCD6 241 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 C20orf166-AS1Q96NR2 134 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 TRNT1Q96Q11 434 aaKnown RBP1.54□□□□□ -2.16
SMAD4-207ENST00000589076 EBNA1BP2Q99848 306 aaKnown RBP1.54□□□□□ -2.16
SMAD4-207ENST00000589076 ZNF251Q9BRH9 671 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 NDEL1Q9GZM8 345 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 C11orf49Q9H6J7 331 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 SPACA1Q9HBV2 294 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 TMEM216Q9P0N5 145 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 VPREB3Q9UKI3 123 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 EIF4G1Q04637 1599 aaKnown RBP1.54□□□□□ -2.16
SMAD4-207ENST00000589076 PLXNA3P51805 1871 aa1.54□□□□□ -2.16
SMAD4-207ENST00000589076 IGKV1-12A0A0C4DH73 117 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 A8MWP6 167 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 ZNF878C9JN71 531 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 F5H5T6 163 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 C3orf84H3BNL1 204 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 H3BSA7 217 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 K7EQS6 105 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 M0QYV0 167 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 TOR1AO14656 332 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 CLUHO75153 1309 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 CDK14O94921 469 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 IGKV1D-12P01611 117 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 CD151P48509 253 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 GABARAPL2P60520 117 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 ZNHIT3Q15649 155 aaPredicted RBP1.53□□□□□ -2.16
SMAD4-207ENST00000589076 CENPWQ5EE01 88 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 EBLN2Q6P2I7 272 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 SPNS3Q6ZMD2 512 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 GVINP1Q7Z2Y8 2422 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 C2orf73Q8N5S3 287 aaPredicted RBP1.53□□□□□ -2.16
SMAD4-207ENST00000589076 OR10P1Q8NGE3 313 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 ZNRF2Q8NHG8 242 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 GPR119Q8TDV5 335 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 SMIM12Q96EX1 92 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 CSMD1Q96PZ7 3565 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 BBS2Q9BXC9 721 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 METTL17Q9H7H0 456 aaPredicted RBP1.53□□□□□ -2.16
SMAD4-207ENST00000589076 UBQLN4Q9NRR5 601 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 WASHC3Q9Y3C0 194 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 MTCH2Q9Y6C9 303 aa1.53□□□□□ -2.16
SMAD4-207ENST00000589076 ADAMTS7Q9UKP4 1686 aa1.52□□□□□ -2.17
SMAD4-207ENST00000589076 SPEGQ15772 3267 aa1.52□□□□□ -2.17
SMAD4-207ENST00000589076 PIK3R4Q99570 1358 aa1.52□□□□□ -2.17
SMAD4-207ENST00000589076 SDHAF1A6NFY7 115 aa1.52□□□□□ -2.17
SMAD4-207ENST00000589076 C17orf51A8MQB3 221 aa1.52□□□□□ -2.17
SMAD4-207ENST00000589076 SMLR1H3BR10 107 aa1.52□□□□□ -2.17
SMAD4-207ENST00000589076 TOX3O15405 576 aaPredicted RBP1.52□□□□□ -2.17
SMAD4-207ENST00000589076 NDUFS6O75380 124 aaKnown RBP1.52□□□□□ -2.17
SMAD4-207ENST00000589076 RD3LP0DJH9 198 aa1.52□□□□□ -2.17
SMAD4-207ENST00000589076 PSMD7P51665 324 aa1.52□□□□□ -2.17
SMAD4-207ENST00000589076 AKR1C2P52895 323 aa1.52□□□□□ -2.17
SMAD4-207ENST00000589076 PDK2Q15119 407 aa1.52□□□□□ -2.17
SMAD4-207ENST00000589076 MAPK14Q16539 360 aa1.52□□□□□ -2.17
SMAD4-207ENST00000589076 ZNF322Q6U7Q0 402 aaPredicted RBP1.52□□□□□ -2.17
SMAD4-207ENST00000589076 SDIM1Q6ZPB5 146 aa1.52□□□□□ -2.17
SMAD4-207ENST00000589076 MSRB3Q8IXL7 192 aa1.52□□□□□ -2.17
SMAD4-207ENST00000589076 BOD1L2Q8IYS8 172 aa1.52□□□□□ -2.17
SMAD4-207ENST00000589076 OR52E4Q8NGH9 312 aa1.52□□□□□ -2.17
SMAD4-207ENST00000589076 OR2V1Q8NHB1 315 aa1.52□□□□□ -2.17
SMAD4-207ENST00000589076 MFSD8Q8NHS3 518 aa1.52□□□□□ -2.17
SMAD4-207ENST00000589076 MED18Q9BUE0 208 aa1.52□□□□□ -2.17
SMAD4-207ENST00000589076 SLC19A3Q9BZV2 496 aa1.52□□□□□ -2.17
SMAD4-207ENST00000589076 GTSF1LQ9H1H1 148 aa1.52□□□□□ -2.17
SMAD4-207ENST00000589076 CFAP45Q9UL16 551 aa1.52□□□□□ -2.17
SMAD4-207ENST00000589076 FIS1Q9Y3D6 152 aa1.52□□□□□ -2.17
SMAD4-207ENST00000589076 ADAMTSL1Q8N6G6 1762 aa1.52□□□□□ -2.17
SMAD4-207ENST00000589076 OR4A8P0C604 315 aa1.51□□□□□ -2.17
SMAD4-207ENST00000589076 CBR1P16152 277 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms