RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 ORM2P19652 201 aa1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 CDK2P24941 298 aa1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 ATP6V0CP27449 155 aa1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 ADORA1P30542 326 aa1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 PPP1CCP36873 323 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 H2BFSP57053 126 aa1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 BSPH1Q075Z2 132 aa1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 PDGFRLQ15198 375 aa1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 TBC1D28Q2M2D7 210 aa1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 ACSBG2Q5FVE4 666 aa1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 XKRXQ6PP77 449 aa1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 LMX1AQ8TE12 382 aa1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 CYGBQ8WWM9 190 aa1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 TLCD1Q96CP7 247 aa1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 ZNF514Q96K75 400 aaPredicted RBP1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 PACRGQ96M98 296 aaPredicted RBP1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 CDCA4Q9BXL8 241 aa1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 SMDT1Q9H4I9 107 aa1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 TUBA4BQ9H853 241 aa1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 EURLQ9NYK6 297 aa1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 TAS2R9Q9NYW1 312 aa1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 DNAJC12Q9UKB3 198 aa1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 TP53TG1Q9Y2A0 90 aa1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 HSPE1-MOB4S4R3N1 261 aa1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 BRD4O60885 1362 aaPredicted RBP1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 ZSWIM8A7E2V4 1837 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 VWA8A3KMH1 1905 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 DHRS12A0PJE2 317 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 SDHAF1A6NFY7 115 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 METTL15A6NJ78 407 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 HPGDSO60760 199 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 CRYBA1P05813 215 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 LINC00614P0C842 121 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 OPRM1P35372 400 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 LPAR6P43657 344 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 UBE2G2P60604 165 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 PSG4Q00888 419 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 MGAT3Q09327 533 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 MED21Q13503 144 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 HLA-DRB5Q30154 266 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 DNM1P34Q6PK57 102 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 DRAM2Q6UX65 266 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 SDIM1Q6ZPB5 146 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 Q6ZRU5 148 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 CD302Q8IX05 232 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 MSRB3Q8IXL7 192 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 TMEM75Q8N9X5 138 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 SUN5Q8TC36 379 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 ACY3Q96HD9 319 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 MND1Q9BWT6 205 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 AICDAQ9GZX7 198 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 SLC22A4Q9H015 551 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 MED28Q9H204 178 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 PARVAQ9NVD7 372 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 PSORS1C2Q9UIG4 136 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 PSMD13Q9UNM6 376 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 HEY1Q9Y5J3 304 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 CEP170Q5SW79 1584 aa1.68□□□□□ -2.14
SMCHD1-209ENST00000583441 NPATQ14207 1427 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 A0A0A6YYH2 397 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 C1orf232A0A0U1RR37 186 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 LINC00862A6NCI5 91 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 A6NJ64 397 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 DEDDO75618 318 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 IGLV3-27P01718 113 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 TPM3P06753 285 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 CRYGDP07320 174 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 CD7P09564 240 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 OR13C7P0DN81 318 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 GZMHP20718 246 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 CD40LGP29965 261 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 GRPRP30550 384 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 RPL14P50914 215 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 ACTBP60709 375 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 FGF12P61328 243 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 ACTG1P63261 375 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 ZNF117Q03924 483 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 HTR4Q13639 388 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 TMEM176BQ3YBM2 270 aaPredicted RBP1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 MRPL51Q4U2R6 128 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 CCDC121Q6ZUS5 278 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 OTUD6BQ8N6M0 293 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 MBOAT7Q96N66 472 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 STACQ99469 402 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 MGLLQ99685 303 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 GNB1LQ9BYB4 327 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 OR51B6Q9H340 312 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 TXNL4BQ9NX01 149 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 FAM206AQ9NX38 181 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 HHLA2Q9UM44 414 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 MRPS16Q9Y3D3 137 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 OR51B4Q9Y5P0 310 aa1.67□□□□□ -2.14
SMCHD1-209ENST00000583441 PTPRJQ12913 1337 aa1.66□□□□□ -2.14
SMCHD1-209ENST00000583441 TRAV8-1A0A0A6YYK1 113 aa1.66□□□□□ -2.14
SMCHD1-209ENST00000583441 TEX50A0A1B0GTY4 177 aa1.66□□□□□ -2.14
SMCHD1-209ENST00000583441 GRIFINA4D1Z8 144 aa1.66□□□□□ -2.14
SMCHD1-209ENST00000583441 ATP8B1O43520 1251 aa1.66□□□□□ -2.14
SMCHD1-209ENST00000583441 HSPA9P38646 679 aaKnown RBP1.66□□□□□ -2.14
SMCHD1-209ENST00000583441 RWDD2BP57060 319 aa1.66□□□□□ -2.14
SMCHD1-209ENST00000583441 TPM4P67936 248 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms