RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 Q3ZCU0 254 aa8.9□□□□□ -0.98
RPAIN-214ENST00000574003 TRAT1Q6PIZ9 186 aa8.9□□□□□ -0.98
RPAIN-214ENST00000574003 MRPL41Q8IXM3 137 aaKnown RBP8.9□□□□□ -0.98
RPAIN-214ENST00000574003 SVOPQ8N4V2 548 aa8.9□□□□□ -0.98
RPAIN-214ENST00000574003 KLHL30-AS1Q8NEE0 82 aa8.9□□□□□ -0.98
RPAIN-214ENST00000574003 OR51D1Q8NGF3 324 aa8.9□□□□□ -0.98
RPAIN-214ENST00000574003 KCNG3Q8TAE7 436 aa8.9□□□□□ -0.98
RPAIN-214ENST00000574003 IL1F10Q8WWZ1 152 aa8.9□□□□□ -0.98
RPAIN-214ENST00000574003 THRSPQ92748 146 aa8.9□□□□□ -0.98
RPAIN-214ENST00000574003 LPAR5Q9H1C0 372 aa8.9□□□□□ -0.98
RPAIN-214ENST00000574003 ABCG5Q9H222 651 aa8.9□□□□□ -0.98
RPAIN-214ENST00000574003 PLGRKTQ9HBL7 147 aa8.9□□□□□ -0.98
RPAIN-214ENST00000574003 CHMP1AQ9HD42 196 aaPredicted RBP8.9□□□□□ -0.98
RPAIN-214ENST00000574003 LIN7CQ9NUP9 197 aaKnown RBP8.9□□□□□ -0.98
RPAIN-214ENST00000574003 AK3Q9UIJ7 227 aa8.9□□□□□ -0.98
RPAIN-214ENST00000574003 SAA2-SAA4A0A096LPE2 208 aa8.89□□□□□ -0.99
RPAIN-214ENST00000574003 SHISA3A0PJX4 238 aa8.89□□□□□ -0.99
RPAIN-214ENST00000574003 BPNT1O95861 308 aa8.89□□□□□ -0.99
RPAIN-214ENST00000574003 SAA2P0DJI9 122 aaPredicted RBP8.89□□□□□ -0.99
RPAIN-214ENST00000574003 CPEP16870 476 aa8.89□□□□□ -0.99
RPAIN-214ENST00000574003 CALRP27797 417 aaKnown RBP8.89□□□□□ -0.99
RPAIN-214ENST00000574003 THBS3P49746 956 aa8.89□□□□□ -0.99
RPAIN-214ENST00000574003 TMEM50BP56557 158 aa8.89□□□□□ -0.99
RPAIN-214ENST00000574003 OR10A3P58181 314 aa8.89□□□□□ -0.99
RPAIN-214ENST00000574003 MLLT11Q13015 90 aaPredicted RBP8.89□□□□□ -0.99
RPAIN-214ENST00000574003 SSX1Q16384 188 aa8.89□□□□□ -0.99
RPAIN-214ENST00000574003 RPL39P5Q59GN2 51 aa8.89□□□□□ -0.99
RPAIN-214ENST00000574003 HES5Q5TA89 166 aa8.89□□□□□ -0.99
RPAIN-214ENST00000574003 ZNF880Q6PDB4 577 aa8.89□□□□□ -0.99
RPAIN-214ENST00000574003 GLDNQ6ZMI3 551 aaPredicted RBP8.89□□□□□ -0.99
RPAIN-214ENST00000574003 FOXRED2Q8IWF2 684 aa8.89□□□□□ -0.99
RPAIN-214ENST00000574003 FAM71E2Q8N5Q1 922 aa8.89□□□□□ -0.99
RPAIN-214ENST00000574003 OR6M1Q8NGM8 313 aa8.89□□□□□ -0.99
RPAIN-214ENST00000574003 GALMQ96C23 342 aa8.89□□□□□ -0.99
RPAIN-214ENST00000574003 MGLLQ99685 303 aa8.89□□□□□ -0.99
RPAIN-214ENST00000574003 RASL11BQ9BPW5 248 aa8.89□□□□□ -0.99
RPAIN-214ENST00000574003 NABP2Q9BQ15 211 aa8.89□□□□□ -0.99
RPAIN-214ENST00000574003 IFI27L2Q9H2X8 130 aa8.89□□□□□ -0.99
RPAIN-214ENST00000574003 PLEKHJ1Q9NW61 149 aa8.89□□□□□ -0.99
RPAIN-214ENST00000574003 OR1A1Q9P1Q5 309 aa8.89□□□□□ -0.99
RPAIN-214ENST00000574003 JPT1Q9UK76 154 aa8.89□□□□□ -0.99
RPAIN-214ENST00000574003 A0A0B4J203 849 aa8.88□□□□□ -0.99
RPAIN-214ENST00000574003 WI2-2373I1.2A0A1W2PRP0 233 aa8.88□□□□□ -0.99
RPAIN-214ENST00000574003 SMIM30A4D0T7 59 aa8.88□□□□□ -0.99
RPAIN-214ENST00000574003 FOXI3A8MTJ6 420 aaPredicted RBP8.88□□□□□ -0.99
RPAIN-214ENST00000574003 K7EIL1 84 aa8.88□□□□□ -0.99
RPAIN-214ENST00000574003 AP4M1O00189 453 aa8.88□□□□□ -0.99
RPAIN-214ENST00000574003 SLC17A2O00624 439 aa8.88□□□□□ -0.99
RPAIN-214ENST00000574003 YPEL1O60688 119 aa8.88□□□□□ -0.99
RPAIN-214ENST00000574003 NAPSAO96009 420 aa8.88□□□□□ -0.99
RPAIN-214ENST00000574003 ARSBP15848 533 aa8.88□□□□□ -0.99
RPAIN-214ENST00000574003 VEGFCP49767 419 aa8.88□□□□□ -0.99
RPAIN-214ENST00000574003 LINC00205P59089 165 aa8.88□□□□□ -0.99
RPAIN-214ENST00000574003 ACTBP60709 375 aa8.88□□□□□ -0.99
RPAIN-214ENST00000574003 HTD2P86397 168 aa8.88□□□□□ -0.99
RPAIN-214ENST00000574003 MMDQ15546 238 aa8.88□□□□□ -0.99
RPAIN-214ENST00000574003 RAB11BQ15907 218 aa8.88□□□□□ -0.99
RPAIN-214ENST00000574003 TMEM30BQ3MIR4 351 aa8.88□□□□□ -0.99
RPAIN-214ENST00000574003 PRSS48Q7RTY5 328 aa8.88□□□□□ -0.99
RPAIN-214ENST00000574003 RAX2Q96IS3 184 aa8.88□□□□□ -0.99
RPAIN-214ENST00000574003 ARHGAP5-AS1Q96IT6 56 aa8.88□□□□□ -0.99
RPAIN-214ENST00000574003 ABHD14BQ96IU4 210 aa8.88□□□□□ -0.99
RPAIN-214ENST00000574003 YPEL2Q96QA6 119 aa8.88□□□□□ -0.99
RPAIN-214ENST00000574003 RAB9BQ9NP90 201 aa8.88□□□□□ -0.99
RPAIN-214ENST00000574003 ZNF107Q9UII5 783 aaPredicted RBP8.88□□□□□ -0.99
RPAIN-214ENST00000574003 RNF150Q9ULK6 438 aa8.88□□□□□ -0.99
RPAIN-214ENST00000574003 WSB1Q9Y6I7 421 aa8.88□□□□□ -0.99
RPAIN-214ENST00000574003 TMEM272A0A1B0GTI8 110 aa8.87□□□□□ -0.99
RPAIN-214ENST00000574003 G3V318 75 aa8.87□□□□□ -0.99
RPAIN-214ENST00000574003 TXNL1O43396 289 aa8.87□□□□□ -0.99
RPAIN-214ENST00000574003 SCTP09683 121 aa8.87□□□□□ -0.99
RPAIN-214ENST00000574003 SOX6P35712 828 aa8.87□□□□□ -0.99
RPAIN-214ENST00000574003 RAB25P57735 213 aa8.87□□□□□ -0.99
RPAIN-214ENST00000574003 SLC35B1P78383 322 aa8.87□□□□□ -0.99
RPAIN-214ENST00000574003 CFHR3Q02985 330 aa8.87□□□□□ -0.99
RPAIN-214ENST00000574003 PNLIPRP3Q17RR3 467 aa8.87□□□□□ -0.99
RPAIN-214ENST00000574003 C2orf76Q3KRA6 126 aa8.87□□□□□ -0.99
RPAIN-214ENST00000574003 MOGAT2Q3SYC2 334 aa8.87□□□□□ -0.99
RPAIN-214ENST00000574003 PLAC9Q5JTB6 97 aa8.87□□□□□ -0.99
RPAIN-214ENST00000574003 FAM131AQ6UXB0 335 aa8.87□□□□□ -0.99
RPAIN-214ENST00000574003 ZNF833PQ6ZTB9 187 aa8.87□□□□□ -0.99
RPAIN-214ENST00000574003 ZNF695Q8IW36 515 aa8.87□□□□□ -0.99
RPAIN-214ENST00000574003 OR2AK2Q8NG84 335 aa8.87□□□□□ -0.99
RPAIN-214ENST00000574003 FAM3DQ96BQ1 224 aa8.87□□□□□ -0.99
RPAIN-214ENST00000574003 RCC1LQ96I51 464 aaKnown RBP8.87□□□□□ -0.99
RPAIN-214ENST00000574003 ZNF251Q9BRH9 671 aa8.87□□□□□ -0.99
RPAIN-214ENST00000574003 PECRQ9BY49 303 aa8.87□□□□□ -0.99
RPAIN-214ENST00000574003 ISYNA1Q9NPH2 558 aa8.87□□□□□ -0.99
RPAIN-214ENST00000574003 ABRACLQ9P1F3 81 aa8.87□□□□□ -0.99
RPAIN-214ENST00000574003 SLC23A1Q9UHI7 598 aa8.87□□□□□ -0.99
RPAIN-214ENST00000574003 IGKV1-6A0A0C4DH72 117 aa8.86□□□□□ -0.99
RPAIN-214ENST00000574003 LDLRAD4O15165 306 aa8.86□□□□□ -0.99
RPAIN-214ENST00000574003 ATP6V0E1O15342 81 aa8.86□□□□□ -0.99
RPAIN-214ENST00000574003 CD3GP09693 182 aa8.86□□□□□ -0.99
RPAIN-214ENST00000574003 CT45A6P0DMU7 189 aa8.86□□□□□ -0.99
RPAIN-214ENST00000574003 CT45A5P0DMU8 189 aa8.86□□□□□ -0.99
RPAIN-214ENST00000574003 CT45A7P0DMV0 189 aa8.86□□□□□ -0.99
RPAIN-214ENST00000574003 HLA-DRB3P79483 266 aa8.86□□□□□ -0.99
RPAIN-214ENST00000574003 NDPQ00604 133 aa8.86□□□□□ -0.99
RPAIN-214ENST00000574003 STEAP3Q658P3 488 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms