RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 MSMBP08118 114 aa10.42□□□□□ -0.74
SF3B3-206ENST00000565990 CHATP28329 748 aa10.42□□□□□ -0.74
SF3B3-206ENST00000565990 DVL1P1P54792 670 aaPredicted RBP10.42□□□□□ -0.74
SF3B3-206ENST00000565990 CR1LQ2VPA4 569 aa10.42□□□□□ -0.74
SF3B3-206ENST00000565990 LY6G6FQ5SQ64 297 aa10.42□□□□□ -0.74
SF3B3-206ENST00000565990 C11orf87Q6NUJ2 197 aa10.42□□□□□ -0.74
SF3B3-206ENST00000565990 UQCC3Q6UW78 93 aa10.42□□□□□ -0.74
SF3B3-206ENST00000565990 ZNF546Q86UE3 836 aa10.42□□□□□ -0.74
SF3B3-206ENST00000565990 GAPTQ8N292 157 aa10.42□□□□□ -0.74
SF3B3-206ENST00000565990 OR56B1Q8NGI3 324 aa10.42□□□□□ -0.74
SF3B3-206ENST00000565990 OR4D10Q8NGI6 311 aa10.42□□□□□ -0.74
SF3B3-206ENST00000565990 OR13C8Q8NGS7 320 aa10.42□□□□□ -0.74
SF3B3-206ENST00000565990 OR10R2Q8NGX6 335 aa10.42□□□□□ -0.74
SF3B3-206ENST00000565990 CORO2AQ92828 525 aa10.42□□□□□ -0.74
SF3B3-206ENST00000565990 IFT46Q9NQC8 304 aa10.42□□□□□ -0.74
SF3B3-206ENST00000565990 MMP26Q9NRE1 261 aa10.42□□□□□ -0.74
SF3B3-206ENST00000565990 RPUSD1Q9UJJ7 312 aaKnown RBP10.42□□□□□ -0.74
SF3B3-206ENST00000565990 TNFSF18Q9UNG2 199 aa10.42□□□□□ -0.74
SF3B3-206ENST00000565990 KIAA2026Q5HYC2 2103 aa10.42□□□□□ -0.74
SF3B3-206ENST00000565990 MAST4O15021 2626 aa10.41□□□□□ -0.74
SF3B3-206ENST00000565990 RNF222A6NCQ9 220 aa10.41□□□□□ -0.74
SF3B3-206ENST00000565990 OR5H14A6NHG9 310 aa10.41□□□□□ -0.74
SF3B3-206ENST00000565990 C22orf46C9J442 243 aa10.41□□□□□ -0.74
SF3B3-206ENST00000565990 SMAD7O15105 426 aaKnown RBP10.41□□□□□ -0.74
SF3B3-206ENST00000565990 LIPFP07098 398 aa10.41□□□□□ -0.74
SF3B3-206ENST00000565990 CGB3P0DN86 165 aa10.41□□□□□ -0.74
SF3B3-206ENST00000565990 CGB7P0DN87 165 aa10.41□□□□□ -0.74
SF3B3-206ENST00000565990 GABRR1P24046 479 aa10.41□□□□□ -0.74
SF3B3-206ENST00000565990 BLVRBP30043 206 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-206ENST00000565990 LCN2P80188 198 aa10.41□□□□□ -0.74
SF3B3-206ENST00000565990 MEF2CQ06413 473 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-206ENST00000565990 RBM39Q14498 530 aaKnown RBP10.41□□□□□ -0.74
SF3B3-206ENST00000565990 SURF2Q15527 256 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-206ENST00000565990 PAN3Q58A45 887 aaKnown RBP10.41□□□□□ -0.74
SF3B3-206ENST00000565990 PLAC9Q5JTB6 97 aa10.41□□□□□ -0.74
SF3B3-206ENST00000565990 TMEM200BQ69YZ2 307 aa10.41□□□□□ -0.74
SF3B3-206ENST00000565990 ZNF660Q6AZW8 331 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-206ENST00000565990 SLC35E4Q6ICL7 350 aa10.41□□□□□ -0.74
SF3B3-206ENST00000565990 BRICD5Q6PL45 260 aa10.41□□□□□ -0.74
SF3B3-206ENST00000565990 TRAPPC6BQ86SZ2 158 aa10.41□□□□□ -0.74
SF3B3-206ENST00000565990 TMEM17Q86X19 198 aa10.41□□□□□ -0.74
SF3B3-206ENST00000565990 BVESQ8NE79 360 aa10.41□□□□□ -0.74
SF3B3-206ENST00000565990 TMEM185AQ8NFB2 350 aa10.41□□□□□ -0.74
SF3B3-206ENST00000565990 ST8SIA4Q92187 359 aa10.41□□□□□ -0.74
SF3B3-206ENST00000565990 COQ2Q96H96 371 aa10.41□□□□□ -0.74
SF3B3-206ENST00000565990 NMES1Q9C002 83 aa10.41□□□□□ -0.74
SF3B3-206ENST00000565990 TINAGL1Q9GZM7 467 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-206ENST00000565990 CHST6Q9GZX3 395 aa10.41□□□□□ -0.74
SF3B3-206ENST00000565990 WNK2Q9Y3S1 2297 aa10.41□□□□□ -0.74
SF3B3-206ENST00000565990 TRBV6-7A0A0A0MS04 114 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 TRBV23-1A0A0A0MS06 115 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 TRAV14DV4A0A0A6YYC5 116 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 TRAV20A0A0B4J274 112 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 C9orf170A2RU37 121 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 DBX1A6NMT0 343 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 POM121CA8CG34 1229 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 CD5LO43866 347 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 TGFAP01135 160 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 IFNA6P05013 189 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 NDUFB7P17568 137 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 GATA3P23771 443 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 PAX8Q06710 450 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 AESQ08117 197 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 C2orf68Q2NKX9 166 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 MOGAT2Q3SYC2 334 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 CDNFQ49AH0 187 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 C1orf122Q6ZSJ8 110 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 HOGA1Q86XE5 327 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 C11orf42Q8N5U0 333 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 LHFPL5Q8TAF8 219 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 STOML3Q8TAV4 291 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 ST8SIA2Q92186 375 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 TMEM186Q96B77 213 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 SLC6A7Q99884 636 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 SULT4A1Q9BR01 284 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 OCSTAMPQ9BR26 566 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 FAAP24Q9BTP7 215 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 C19orf12Q9NSK7 152 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 KCNK7Q9Y2U2 307 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 INSIG2Q9Y5U4 225 aa10.4□□□□□ -0.74
SF3B3-206ENST00000565990 IGHV2-70DA0A0C4DH43 119 aa10.39□□□□□ -0.75
SF3B3-206ENST00000565990 LOC105371267A0A1B0GV96 52 aa10.39□□□□□ -0.75
SF3B3-206ENST00000565990 RAB19A4D1S5 217 aa10.39□□□□□ -0.75
SF3B3-206ENST00000565990 TMEM235A6NFC5 223 aa10.39□□□□□ -0.75
SF3B3-206ENST00000565990 TEX46H3BTG2 121 aa10.39□□□□□ -0.75
SF3B3-206ENST00000565990 HLA-AP01891 365 aaKnown RBP10.39□□□□□ -0.75
SF3B3-206ENST00000565990 GLIPR1P48060 266 aa10.39□□□□□ -0.75
SF3B3-206ENST00000565990 TAS2R46P59540 309 aa10.39□□□□□ -0.75
SF3B3-206ENST00000565990 RPL31P62899 125 aaKnown RBP10.39□□□□□ -0.75
SF3B3-206ENST00000565990 EIF5AP63241 154 aaKnown RBP10.39□□□□□ -0.75
SF3B3-206ENST00000565990 TMEM128Q5BJH2 165 aa10.39□□□□□ -0.75
SF3B3-206ENST00000565990 DCAF12L2Q5VW00 463 aa10.39□□□□□ -0.75
SF3B3-206ENST00000565990 ZNF497Q6ZNH5 498 aa10.39□□□□□ -0.75
SF3B3-206ENST00000565990 C6orf201Q7Z4U5 140 aa10.39□□□□□ -0.75
SF3B3-206ENST00000565990 THAP6Q8TBB0 222 aa10.39□□□□□ -0.75
SF3B3-206ENST00000565990 PLPPR1Q8TBJ4 325 aa10.39□□□□□ -0.75
SF3B3-206ENST00000565990 ARHGAP5-AS1Q96IT6 56 aa10.39□□□□□ -0.75
SF3B3-206ENST00000565990 CYYR1Q96J86 154 aa10.39□□□□□ -0.75
SF3B3-206ENST00000565990 PECRQ9BY49 303 aa10.39□□□□□ -0.75
SF3B3-206ENST00000565990 RAB18Q9NP72 206 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms