RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	ZNF343	Q6P1L6	599 aa		11.13	□□□□□ -0.63
SCAPER-215	ENST00000565507	ZNF497	Q6ZNH5	498 aa		11.13	□□□□□ -0.63
SCAPER-215	ENST00000565507	TCEAL7	Q9BRU2	100 aa		11.13	□□□□□ -0.63
SCAPER-215	ENST00000565507	RSG1	Q9BU20	258 aa		11.13	□□□□□ -0.63
SCAPER-215	ENST00000565507	C12orf49	Q9H741	205 aa		11.13	□□□□□ -0.63
SCAPER-215	ENST00000565507	RPRM	Q9NS64	109 aa		11.13	□□□□□ -0.63
SCAPER-215	ENST00000565507	MMP24	Q9Y5R2	645 aa		11.13	□□□□□ -0.63
SCAPER-215	ENST00000565507	ADGRG4	Q8IZF6	3080 aa		11.13	□□□□□ -0.63
SCAPER-215	ENST00000565507	ARHGAP21	Q5T5U3	1957 aa		11.13	□□□□□ -0.63
SCAPER-215	ENST00000565507	LOC102723971	A0A1B0GUV8	181 aa		11.13	□□□□□ -0.63
SCAPER-215	ENST00000565507	NKX2-8	O15522	239 aa		11.13	□□□□□ -0.63
SCAPER-215	ENST00000565507	SYNGR2	O43760	224 aa		11.13	□□□□□ -0.63
SCAPER-215	ENST00000565507	IFNA17	P01571	189 aa		11.13	□□□□□ -0.63
SCAPER-215	ENST00000565507	P4HA3	Q7Z4N8	544 aa		11.13	□□□□□ -0.63
SCAPER-215	ENST00000565507	HAPLN4	Q86UW8	402 aa		11.13	□□□□□ -0.63
SCAPER-215	ENST00000565507	MDP1	Q86V88	176 aa		11.13	□□□□□ -0.63
SCAPER-215	ENST00000565507	OR10G4	Q8NGN3	311 aa		11.13	□□□□□ -0.63
SCAPER-215	ENST00000565507		Q8WTZ3	238 aa		11.13	□□□□□ -0.63
SCAPER-215	ENST00000565507	TVP23C	Q96ET8	276 aa		11.13	□□□□□ -0.63
SCAPER-215	ENST00000565507	GSN-AS1	Q9NRJ2	163 aa		11.13	□□□□□ -0.63
SCAPER-215	ENST00000565507	ABI3	Q9P2A4	366 aa		11.13	□□□□□ -0.63
SCAPER-215	ENST00000565507	C21orf140	B9A014	251 aa		11.12	□□□□□ -0.63
SCAPER-215	ENST00000565507	OR2H2	O95918	312 aa		11.12	□□□□□ -0.63
SCAPER-215	ENST00000565507	IFNA5	P01569	189 aa		11.12	□□□□□ -0.63
SCAPER-215	ENST00000565507	ERVFRD-1	P60508	538 aa		11.12	□□□□□ -0.63
SCAPER-215	ENST00000565507	ZNF726P1	Q15940	193 aa		11.12	□□□□□ -0.63
SCAPER-215	ENST00000565507	SLC35E3	Q7Z769	313 aa		11.12	□□□□□ -0.63
SCAPER-215	ENST00000565507	MYPOP	Q86VE0	399 aa	Predicted RBP	11.12	□□□□□ -0.63
SCAPER-215	ENST00000565507	MCEMP1	Q8IX19	187 aa		11.12	□□□□□ -0.63
SCAPER-215	ENST00000565507	ZNF525	Q8N782	197 aa		11.12	□□□□□ -0.63
SCAPER-215	ENST00000565507	NIPSNAP3B	Q9BS92	247 aa		11.12	□□□□□ -0.63
SCAPER-215	ENST00000565507	VSIR	Q9H7M9	311 aa		11.12	□□□□□ -0.63
SCAPER-215	ENST00000565507	PPP1R3C	Q9UQK1	317 aa		11.12	□□□□□ -0.63
SCAPER-215	ENST00000565507	SPTBN4	Q9H254	2564 aa		11.12	□□□□□ -0.63
SCAPER-215	ENST00000565507	LRP5L	A4QPB2	252 aa		11.12	□□□□□ -0.63
SCAPER-215	ENST00000565507	SP1	P08047	785 aa		11.12	□□□□□ -0.63
SCAPER-215	ENST00000565507	CXCL1	P09341	107 aa		11.12	□□□□□ -0.63
SCAPER-215	ENST00000565507	MDH2	P40926	338 aa	Known RBP	11.12	□□□□□ -0.63
SCAPER-215	ENST00000565507	EIF2S3	P41091	472 aa	Known RBP	11.12	□□□□□ -0.63
SCAPER-215	ENST00000565507	RPS10	P46783	165 aa	Known RBP	11.12	□□□□□ -0.63
SCAPER-215	ENST00000565507	MEOX1	P50221	254 aa		11.12	□□□□□ -0.63
SCAPER-215	ENST00000565507	FBXW9	Q5XUX1	488 aa		11.12	□□□□□ -0.63
SCAPER-215	ENST00000565507	PRR18	Q8N4B5	295 aa		11.12	□□□□□ -0.63
SCAPER-215	ENST00000565507	NIT2	Q9NQR4	276 aa		11.12	□□□□□ -0.63
SCAPER-215	ENST00000565507	MBNL3	Q9NUK0	354 aa	Known RBP	11.12	□□□□□ -0.63
SCAPER-215	ENST00000565507	LINC00587	B1AMM8	73 aa		11.11	□□□□□ -0.63
SCAPER-215	ENST00000565507	SIRPB1	O00241	398 aa		11.11	□□□□□ -0.63
SCAPER-215	ENST00000565507	METTL15P1	P0C7V9	234 aa		11.11	□□□□□ -0.63
SCAPER-215	ENST00000565507	IAPP	P10997	89 aa		11.11	□□□□□ -0.63
SCAPER-215	ENST00000565507	RAB2A	P61019	212 aa		11.11	□□□□□ -0.63
SCAPER-215	ENST00000565507	FAM90A2P	Q658T7	463 aa		11.11	□□□□□ -0.63
SCAPER-215	ENST00000565507	MOB1B	Q7L9L4	216 aa		11.11	□□□□□ -0.63
SCAPER-215	ENST00000565507	SSX7	Q7RTT5	188 aa		11.11	□□□□□ -0.63
SCAPER-215	ENST00000565507	SCCPDH	Q8NBX0	429 aa		11.11	□□□□□ -0.63
SCAPER-215	ENST00000565507	MDS2	Q8NDY4	140 aa		11.11	□□□□□ -0.63
SCAPER-215	ENST00000565507	RNASE11	Q8TAA1	199 aa	Known RBP	11.11	□□□□□ -0.63
SCAPER-215	ENST00000565507	UBALD1	Q8TB05	177 aa		11.11	□□□□□ -0.63
SCAPER-215	ENST00000565507	TCTEX1D2	Q8WW35	142 aa		11.11	□□□□□ -0.63
SCAPER-215	ENST00000565507	CXorf65	A6NEN9	183 aa		11.11	□□□□□ -0.63
SCAPER-215	ENST00000565507	FABP1	P07148	127 aa		11.11	□□□□□ -0.63
SCAPER-215	ENST00000565507	NCMAP	Q5T1S8	102 aa		11.11	□□□□□ -0.63
SCAPER-215	ENST00000565507	MBD3L1	Q8WWY6	194 aa		11.11	□□□□□ -0.63
SCAPER-215	ENST00000565507	PSMG3	Q9BT73	122 aa	Predicted RBP	11.11	□□□□□ -0.63
SCAPER-215	ENST00000565507	PSENEN	Q9NZ42	101 aa		11.11	□□□□□ -0.63
SCAPER-215	ENST00000565507	GNG13	Q9P2W3	67 aa		11.11	□□□□□ -0.63
SCAPER-215	ENST00000565507	GLIPR1	P48060	266 aa		11.1	□□□□□ -0.63
SCAPER-215	ENST00000565507	SLC25A24	Q6NUK1	477 aa		11.1	□□□□□ -0.63
SCAPER-215	ENST00000565507	RTL8A	Q9BWD3	113 aa		11.1	□□□□□ -0.63
SCAPER-215	ENST00000565507	SIRT7	Q9NRC8	400 aa		11.1	□□□□□ -0.63
SCAPER-215	ENST00000565507	TRAPPC2L	Q9UL33	140 aa		11.1	□□□□□ -0.63
SCAPER-215	ENST00000565507	WIPI2	Q9Y4P8	454 aa		11.1	□□□□□ -0.63
SCAPER-215	ENST00000565507	ACACA	Q13085	2346 aa		11.1	□□□□□ -0.63
SCAPER-215	ENST00000565507	IFITM10	A6NMD0	228 aa		11.1	□□□□□ -0.63
SCAPER-215	ENST00000565507	CELA3B	P08861	270 aa		11.1	□□□□□ -0.63
SCAPER-215	ENST00000565507	HOXA5	P20719	270 aa		11.1	□□□□□ -0.63
SCAPER-215	ENST00000565507	CD200	P41217	278 aa		11.1	□□□□□ -0.63
SCAPER-215	ENST00000565507	PMP22	Q01453	160 aa		11.1	□□□□□ -0.63
SCAPER-215	ENST00000565507	KIAA0141	Q14154	515 aa	Predicted RBP	11.1	□□□□□ -0.63
SCAPER-215	ENST00000565507	ZNF146	Q15072	292 aa		11.1	□□□□□ -0.63
SCAPER-215	ENST00000565507	LRRC75B	Q2VPJ9	315 aa		11.1	□□□□□ -0.63
SCAPER-215	ENST00000565507	DRAM1	Q8N682	238 aa		11.1	□□□□□ -0.63
SCAPER-215	ENST00000565507	ZNF665	Q9H7R5	613 aa		11.1	□□□□□ -0.63
SCAPER-215	ENST00000565507	CISD1	Q9NZ45	108 aa	Known RBP	11.1	□□□□□ -0.63
SCAPER-215	ENST00000565507	OR14J1	Q9UGF5	321 aa		11.1	□□□□□ -0.63
SCAPER-215	ENST00000565507	URGCP-MRPS24	S4R325	110 aa		11.1	□□□□□ -0.63
SCAPER-215	ENST00000565507	WDR1	O75083	606 aa		11.09	□□□□□ -0.63
SCAPER-215	ENST00000565507	PGA5	P0DJD9	388 aa		11.09	□□□□□ -0.63
SCAPER-215	ENST00000565507	BCL2	P10415	239 aa		11.09	□□□□□ -0.63
SCAPER-215	ENST00000565507	SLC10A1	Q14973	349 aa		11.09	□□□□□ -0.63
SCAPER-215	ENST00000565507	ALKBH6	Q3KRA9	238 aa		11.09	□□□□□ -0.63
SCAPER-215	ENST00000565507	RNFT1	Q5M7Z0	435 aa		11.09	□□□□□ -0.63
SCAPER-215	ENST00000565507		Q8IYB0	196 aa		11.09	□□□□□ -0.63
SCAPER-215	ENST00000565507	SCGB1C1	Q8TD33	95 aa		11.09	□□□□□ -0.63
SCAPER-215	ENST00000565507	WDYHV1	Q96HA8	205 aa		11.09	□□□□□ -0.63
SCAPER-215	ENST00000565507	TMPRSS5	Q9H3S3	457 aa		11.09	□□□□□ -0.63
SCAPER-215	ENST00000565507	LIN7C	Q9NUP9	197 aa	Known RBP	11.09	□□□□□ -0.63
SCAPER-215	ENST00000565507	KLF13	Q9Y2Y9	288 aa	Predicted RBP	11.09	□□□□□ -0.63
SCAPER-215	ENST00000565507	TGIF2-C20orf24	A0A0A6YYL0	155 aa		11.09	□□□□□ -0.63
SCAPER-215	ENST00000565507	CDIPT	O14735	213 aa		11.09	□□□□□ -0.63
SCAPER-215	ENST00000565507	SMPD2	O60906	423 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms