RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 UBQLN4Q9NRR5 601 aa0.77□□□□□ -2.29
CHD9-207ENST00000562806 CLEC2DQ9UHP7 191 aa0.77□□□□□ -2.29
CHD9-207ENST00000562806 HHLA2Q9UM44 414 aa0.77□□□□□ -2.29
CHD9-207ENST00000562806 SNX12Q9UMY4 172 aa0.77□□□□□ -2.29
CHD9-207ENST00000562806 RPL26L1Q9UNX3 145 aaKnown RBP0.77□□□□□ -2.29
CHD9-207ENST00000562806 ATG2BQ96BY7 2078 aa0.76□□□□□ -2.29
CHD9-207ENST00000562806 SNAP29O95721 258 aa0.76□□□□□ -2.29
CHD9-207ENST00000562806 UCHL1P09936 223 aa0.76□□□□□ -2.29
CHD9-207ENST00000562806 IL9P15248 144 aa0.76□□□□□ -2.29
CHD9-207ENST00000562806 NPPCP23582 126 aa0.76□□□□□ -2.29
CHD9-207ENST00000562806 OPRM1P35372 400 aa0.76□□□□□ -2.29
CHD9-207ENST00000562806 PPP1CCP36873 323 aaKnown RBP0.76□□□□□ -2.29
CHD9-207ENST00000562806 PSG3Q16557 428 aa0.76□□□□□ -2.29
CHD9-207ENST00000562806 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.76□□□□□ -2.29
CHD9-207ENST00000562806 TTC33Q6PID6 262 aaPredicted RBP0.76□□□□□ -2.29
CHD9-207ENST00000562806 COA5Q86WW8 74 aa0.76□□□□□ -2.29
CHD9-207ENST00000562806 ANGPTL6Q8NI99 470 aa0.76□□□□□ -2.29
CHD9-207ENST00000562806 TMIGD2Q96BF3 282 aa0.76□□□□□ -2.29
CHD9-207ENST00000562806 MSANTD3Q96H12 275 aa0.76□□□□□ -2.29
CHD9-207ENST00000562806 SPZ1Q9BXG8 430 aa0.76□□□□□ -2.29
CHD9-207ENST00000562806 FBXL15Q9H469 300 aa0.76□□□□□ -2.29
CHD9-207ENST00000562806 TAS2R13Q9NYV9 303 aa0.76□□□□□ -2.29
CHD9-207ENST00000562806 MAT2BQ9NZL9 334 aa0.76□□□□□ -2.29
CHD9-207ENST00000562806 LINC00527Q9UJ94 153 aa0.76□□□□□ -2.29
CHD9-207ENST00000562806 DNAJC12Q9UKB3 198 aa0.76□□□□□ -2.29
CHD9-207ENST00000562806 CLUHO75153 1309 aa0.75□□□□□ -2.29
CHD9-207ENST00000562806 EFCAB9A8MZ26 197 aa0.75□□□□□ -2.29
CHD9-207ENST00000562806 LIN7AO14910 233 aaPredicted RBP0.75□□□□□ -2.29
CHD9-207ENST00000562806 GNRH2O43555 120 aa0.75□□□□□ -2.29
CHD9-207ENST00000562806 STK16O75716 305 aa0.75□□□□□ -2.29
CHD9-207ENST00000562806 CD7P09564 240 aa0.75□□□□□ -2.29
CHD9-207ENST00000562806 ESDP10768 282 aa0.75□□□□□ -2.29
CHD9-207ENST00000562806 CRHBPP24387 322 aa0.75□□□□□ -2.29
CHD9-207ENST00000562806 PSMB3P49720 205 aa0.75□□□□□ -2.29
CHD9-207ENST00000562806 RAP1GDS1P52306 607 aa0.75□□□□□ -2.29
CHD9-207ENST00000562806 AQP5P55064 265 aa0.75□□□□□ -2.29
CHD9-207ENST00000562806 TSPEAR-AS2P59090 65 aa0.75□□□□□ -2.29
CHD9-207ENST00000562806 FGF12P61328 243 aa0.75□□□□□ -2.29
CHD9-207ENST00000562806 ERHP84090 104 aaKnown RBP0.75□□□□□ -2.29
CHD9-207ENST00000562806 PDGFRLQ15198 375 aa0.75□□□□□ -2.29
CHD9-207ENST00000562806 TPRXLQ17RH7 258 aa0.75□□□□□ -2.29
CHD9-207ENST00000562806 TMEM249Q2WGJ8 235 aa0.75□□□□□ -2.29
CHD9-207ENST00000562806 CENPWQ5EE01 88 aa0.75□□□□□ -2.29
CHD9-207ENST00000562806 CCDC124Q96CT7 223 aaKnown RBP0.75□□□□□ -2.29
CHD9-207ENST00000562806 MIEN1Q9BRT3 115 aa0.75□□□□□ -2.29
CHD9-207ENST00000562806 TIMM21Q9BVV7 248 aa0.75□□□□□ -2.29
CHD9-207ENST00000562806 HINT2Q9BX68 163 aa0.75□□□□□ -2.29
CHD9-207ENST00000562806 IFT46Q9NQC8 304 aa0.75□□□□□ -2.29
CHD9-207ENST00000562806 C8orf4Q9NR00 106 aa0.75□□□□□ -2.29
CHD9-207ENST00000562806 NXT1Q9UKK6 140 aaKnown RBP0.75□□□□□ -2.29
CHD9-207ENST00000562806 SNX24Q9Y343 169 aa0.75□□□□□ -2.29
CHD9-207ENST00000562806 FAM215AQ9Y5M1 114 aa0.75□□□□□ -2.29
CHD9-207ENST00000562806 ZNF638Q14966 1978 aaKnown RBP0.75□□□□□ -2.29
CHD9-207ENST00000562806 DISP1Q96F81 1524 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 KIAA0232Q92628 1395 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 ZNF532Q9HCE3 1301 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 ATAD5Q96QE3 1844 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 M0QYV0 167 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 SLC17A3O00476 420 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 POLR3GO15318 223 aaPredicted RBP0.74□□□□□ -2.29
CHD9-207ENST00000562806 CDK14O94921 469 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 PSMG1O95456 288 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 LDOC1O95751 146 aaPredicted RBP0.74□□□□□ -2.29
CHD9-207ENST00000562806 FADS2O95864 444 aaKnown RBP0.74□□□□□ -2.29
CHD9-207ENST00000562806 CST4P01036 141 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 LYNX1P0DP58 116 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 CDK2P24941 298 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 CD24P25063 80 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 PEBP1P30086 187 aaKnown RBP0.74□□□□□ -2.29
CHD9-207ENST00000562806 G6PCP35575 357 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 OR1E2P47887 323 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 CTBP2P56545 445 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 TAS2R45P59539 299 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 TNNC1P63316 161 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 FAM3AP98173 230 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 TRMT12Q53H54 448 aaKnown RBP0.74□□□□□ -2.29
CHD9-207ENST00000562806 Q6ZRN7 208 aaPredicted RBP0.74□□□□□ -2.29
CHD9-207ENST00000562806 C2orf91Q6ZV80 131 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 AHSA2Q719I0 299 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 LHFPL1Q86WI0 220 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 CDRT4Q8N9R6 151 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 OR5J2Q8NH18 312 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 SUN5Q8TC36 379 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 C10orf105Q8TEF2 133 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 OR5P2Q8WZ92 322 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 RORBQ92753 470 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 TAMM41Q96BW9 452 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 ABHD14BQ96IU4 210 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 TBX5Q99593 518 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 ACBD6Q9BR61 282 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 CHST5Q9GZS9 411 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 EIF5A2Q9GZV4 153 aaKnown RBP0.74□□□□□ -2.29
CHD9-207ENST00000562806 MRPS16Q9Y3D3 137 aaKnown RBP0.74□□□□□ -2.29
CHD9-207ENST00000562806 SNX10Q9Y5X0 201 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 SOX21Q9Y651 276 aaPredicted RBP0.74□□□□□ -2.29
CHD9-207ENST00000562806 TRPM6Q9BX84 2022 aa0.74□□□□□ -2.29
CHD9-207ENST00000562806 CACNA1SQ13698 1873 aa0.73□□□□□ -2.29
CHD9-207ENST00000562806 LAMB2P55268 1798 aa0.73□□□□□ -2.29
CHD9-207ENST00000562806 IGKV2-40A0A087WW87 121 aaPredicted RBP0.73□□□□□ -2.29
CHD9-207ENST00000562806 TRAV41A0A0B4J266 112 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms