RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 ACOT12Q8WYK0 555 aa8.57□□□□□ -1.04
TPM1-227ENST00000560970 ARL11Q969Q4 196 aa8.57□□□□□ -1.04
TPM1-227ENST00000560970 KCTD12Q96CX2 325 aaKnown RBP8.57□□□□□ -1.04
TPM1-227ENST00000560970 AKR1E2Q96JD6 320 aa8.57□□□□□ -1.04
TPM1-227ENST00000560970 NEDD4LQ96PU5 975 aa8.57□□□□□ -1.04
TPM1-227ENST00000560970 HDHD3Q9BSH5 251 aaPredicted RBP8.57□□□□□ -1.04
TPM1-227ENST00000560970 FAAP24Q9BTP7 215 aa8.57□□□□□ -1.04
TPM1-227ENST00000560970 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.57□□□□□ -1.04
TPM1-227ENST00000560970 HILPDAQ9Y5L2 63 aa8.57□□□□□ -1.04
TPM1-227ENST00000560970 RYR3Q15413 4870 aa8.56□□□□□ -1.04
TPM1-227ENST00000560970 HBZP02008 142 aa8.56□□□□□ -1.04
TPM1-227ENST00000560970 GLAP06280 429 aa8.56□□□□□ -1.04
TPM1-227ENST00000560970 BLVRBP30043 206 aaPredicted RBP8.56□□□□□ -1.04
TPM1-227ENST00000560970 VEGFCP49767 419 aa8.56□□□□□ -1.04
TPM1-227ENST00000560970 PPP5CP53041 499 aa8.56□□□□□ -1.04
TPM1-227ENST00000560970 RBM39Q14498 530 aaKnown RBP8.56□□□□□ -1.04
TPM1-227ENST00000560970 MOGAT2Q3SYC2 334 aa8.56□□□□□ -1.04
TPM1-227ENST00000560970 SPANXN2Q5MJ10 180 aa8.56□□□□□ -1.04
TPM1-227ENST00000560970 MZT2AQ6P582 158 aa8.56□□□□□ -1.04
TPM1-227ENST00000560970 Q6ZS46 218 aa8.56□□□□□ -1.04
TPM1-227ENST00000560970 CCDC190Q86UF4 302 aa8.56□□□□□ -1.04
TPM1-227ENST00000560970 FAM89BQ8N5H3 189 aa8.56□□□□□ -1.04
TPM1-227ENST00000560970 ZNF565Q8N9K5 539 aa8.56□□□□□ -1.04
TPM1-227ENST00000560970 OR4X2Q8NGF9 303 aa8.56□□□□□ -1.04
TPM1-227ENST00000560970 OR1L1Q8NH94 360 aa8.56□□□□□ -1.04
TPM1-227ENST00000560970 RCC1LQ96I51 464 aaKnown RBP8.56□□□□□ -1.04
TPM1-227ENST00000560970 URM1Q9BTM9 101 aaKnown RBP8.56□□□□□ -1.04
TPM1-227ENST00000560970 LIN7BQ9HAP6 207 aa8.56□□□□□ -1.04
TPM1-227ENST00000560970 MBNL3Q9NUK0 354 aaKnown RBP8.56□□□□□ -1.04
TPM1-227ENST00000560970 GFOD1Q9NXC2 390 aa8.56□□□□□ -1.04
TPM1-227ENST00000560970 AK3Q9UIJ7 227 aa8.56□□□□□ -1.04
TPM1-227ENST00000560970 ADAM30Q9UKF2 790 aa8.56□□□□□ -1.04
TPM1-227ENST00000560970 TRAPPC2LQ9UL33 140 aa8.56□□□□□ -1.04
TPM1-227ENST00000560970 PSG11Q9UQ72 335 aa8.56□□□□□ -1.04
TPM1-227ENST00000560970 A0A1W2PPE3 182 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 NOTOA8MTQ0 251 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 LY6LH3BQJ8 138 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 J3QR06 171 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 K7EIL1 84 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 SDCBPO00560 298 aaPredicted RBP8.55□□□□□ -1.04
TPM1-227ENST00000560970 SLC31A2O15432 143 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 ORC5O43913 435 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 DUS4LO95620 317 aaKnown RBP8.55□□□□□ -1.04
TPM1-227ENST00000560970 SNRPBP14678 240 aaKnown RBP8.55□□□□□ -1.04
TPM1-227ENST00000560970 HTR1DP28221 377 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 PSMD7P51665 324 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 ARHGDIBP52566 201 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 BLCAPP62952 87 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 CD83Q01151 205 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 DIAPH2-AS1Q14236 149 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 GNMTQ14749 295 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 KHDC1LQ5JSQ8 128 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 PLAC9Q5JTB6 97 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 TPTE2P1Q5T6R2 138 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 C11orf87Q6NUJ2 197 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 SFXN4Q6P4A7 337 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 ZNF880Q6PDB4 577 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 PRR18Q8N4B5 295 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 WFDC9Q8NEX5 89 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 OR5AU1Q8NGC0 362 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 OR10A7Q8NGE5 316 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 OR9G1Q8NH87 305 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 ZNF596Q8TC21 504 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 CAPSLQ8WWF8 208 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 ARHGAP5-AS1Q96IT6 56 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 OCSTAMPQ9BR26 566 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 PECRQ9BY49 303 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 TAF9BQ9HBM6 251 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 PLEKHJ1Q9NW61 149 aa8.55□□□□□ -1.04
TPM1-227ENST00000560970 TSSC4Q9Y5U2 329 aaPredicted RBP8.55□□□□□ -1.04
TPM1-227ENST00000560970 BUB1B-PAK6H3BSN5 160 aa8.54□□□□□ -1.04
TPM1-227ENST00000560970 H3BUI4 141 aa8.54□□□□□ -1.04
TPM1-227ENST00000560970 J3QRK9 145 aa8.54□□□□□ -1.04
TPM1-227ENST00000560970 RGS5O15539 181 aa8.54□□□□□ -1.04
TPM1-227ENST00000560970 CA11O75493 328 aa8.54□□□□□ -1.04
TPM1-227ENST00000560970 NAPSAO96009 420 aa8.54□□□□□ -1.04
TPM1-227ENST00000560970 GZMHP20718 246 aa8.54□□□□□ -1.04
TPM1-227ENST00000560970 TNFSF8P32971 234 aa8.54□□□□□ -1.04
TPM1-227ENST00000560970 HMGN3Q15651 99 aa8.54□□□□□ -1.04
TPM1-227ENST00000560970 C6orf183Q5T699 404 aa8.54□□□□□ -1.04
TPM1-227ENST00000560970 ZNF439Q8NDP4 499 aa8.54□□□□□ -1.04
TPM1-227ENST00000560970 OR10V1Q8NGI7 309 aa8.54□□□□□ -1.04
TPM1-227ENST00000560970 LGALS14Q8TCE9 139 aa8.54□□□□□ -1.04
TPM1-227ENST00000560970 CCDC32Q9BV29 185 aa8.54□□□□□ -1.04
TPM1-227ENST00000560970 GPR61Q9BZJ8 451 aa8.54□□□□□ -1.04
TPM1-227ENST00000560970 DPM3Q9P2X0 92 aa8.54□□□□□ -1.04
TPM1-227ENST00000560970 DAPK2Q9UIK4 370 aa8.54□□□□□ -1.04
TPM1-227ENST00000560970 RAB22AQ9UL26 194 aa8.54□□□□□ -1.04
TPM1-227ENST00000560970 KCNK7Q9Y2U2 307 aa8.54□□□□□ -1.04
TPM1-227ENST00000560970 TENM3Q9P273 2699 aa8.54□□□□□ -1.04
TPM1-227ENST00000560970 TCRBV4S1A1TA0A5B7 111 aa8.53□□□□□ -1.04
TPM1-227ENST00000560970 RAB27BO00194 218 aa8.53□□□□□ -1.04
TPM1-227ENST00000560970 MFNGO00587 321 aa8.53□□□□□ -1.04
TPM1-227ENST00000560970 CTDSP2O14595 271 aa8.53□□□□□ -1.04
TPM1-227ENST00000560970 TOR1AO14656 332 aa8.53□□□□□ -1.04
TPM1-227ENST00000560970 RAB6AP20340 208 aa8.53□□□□□ -1.04
TPM1-227ENST00000560970 CD24P25063 80 aa8.53□□□□□ -1.04
TPM1-227ENST00000560970 PTBP1P26599 531 aaKnown RBP eCLIP8.53□□□□□ -1.047e-7■■■□□ 17
TPM1-227ENST00000560970 RGS21Q2M5E4 152 aa8.53□□□□□ -1.04
TPM1-227ENST00000560970 TCTEX1D4Q5JR98 221 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms