RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 DNMT1P26358 1616 aaKnown RBP0.74□□□□□ -2.29
CASC4-210ENST00000559550 CUL9Q8IWT3 2517 aa0.74□□□□□ -2.29
CASC4-210ENST00000559550 MYO5BQ9ULV0 1848 aa0.73□□□□□ -2.29
CASC4-210ENST00000559550 DHRS12A0PJE2 317 aa0.73□□□□□ -2.29
CASC4-210ENST00000559550 RAB19A4D1S5 217 aa0.73□□□□□ -2.29
CASC4-210ENST00000559550 GOLGA8IPA6NC78 632 aa0.73□□□□□ -2.29
CASC4-210ENST00000559550 H3BPC8 53 aa0.73□□□□□ -2.29
CASC4-210ENST00000559550 GPR171O14626 319 aa0.73□□□□□ -2.29
CASC4-210ENST00000559550 GNRH2O43555 120 aa0.73□□□□□ -2.29
CASC4-210ENST00000559550 COA5Q86WW8 74 aa0.73□□□□□ -2.29
CASC4-210ENST00000559550 SLC35F6Q8N357 371 aa0.73□□□□□ -2.29
CASC4-210ENST00000559550 ZNF283Q8N7M2 679 aa0.73□□□□□ -2.29
CASC4-210ENST00000559550 IFT81Q8WYA0 676 aa0.73□□□□□ -2.29
CASC4-210ENST00000559550 MRPS24Q96EL2 167 aaKnown RBP0.73□□□□□ -2.29
CASC4-210ENST00000559550 FIS1Q9Y3D6 152 aa0.73□□□□□ -2.29
CASC4-210ENST00000559550 NYNRINQ9P2P1 1898 aaKnown RBP0.73□□□□□ -2.29
CASC4-210ENST00000559550 IGHV3-15A0A0B4J1V0 119 aa0.72□□□□□ -2.29
CASC4-210ENST00000559550 IGKV1D-43A0A0B4J1Z2 117 aa0.72□□□□□ -2.29
CASC4-210ENST00000559550 MDFIC2A0A1B0GVS7 189 aa0.72□□□□□ -2.29
CASC4-210ENST00000559550 A0A1B0GX12 115 aa0.72□□□□□ -2.29
CASC4-210ENST00000559550 A8MUN3 132 aa0.72□□□□□ -2.29
CASC4-210ENST00000559550 CRXO43186 299 aaPredicted RBP0.72□□□□□ -2.29
CASC4-210ENST00000559550 ORM2P19652 201 aa0.72□□□□□ -2.29
CASC4-210ENST00000559550 GADD45AP24522 165 aa0.72□□□□□ -2.29
CASC4-210ENST00000559550 ACTR1BP42025 376 aa0.72□□□□□ -2.29
CASC4-210ENST00000559550 PSMB3P49720 205 aa0.72□□□□□ -2.29
CASC4-210ENST00000559550 ACTBP60709 375 aa0.72□□□□□ -2.29
CASC4-210ENST00000559550 ACTG1P63261 375 aa0.72□□□□□ -2.29
CASC4-210ENST00000559550 TRMT12Q53H54 448 aaKnown RBP0.72□□□□□ -2.29
CASC4-210ENST00000559550 GLT6D1Q7Z4J2 308 aa0.72□□□□□ -2.29
CASC4-210ENST00000559550 TMEM75Q8N9X5 138 aa0.72□□□□□ -2.29
CASC4-210ENST00000559550 OR4P4Q8NGL7 312 aa0.72□□□□□ -2.29
CASC4-210ENST00000559550 HSPB9Q9BQS6 159 aa0.72□□□□□ -2.29
CASC4-210ENST00000559550 NAA38Q9BRA0 125 aaKnown RBP0.72□□□□□ -2.29
CASC4-210ENST00000559550 MED18Q9BUE0 208 aa0.72□□□□□ -2.29
CASC4-210ENST00000559550 GOLPH3Q9H4A6 298 aa0.72□□□□□ -2.29
CASC4-210ENST00000559550 DOK5Q9P104 306 aa0.72□□□□□ -2.29
CASC4-210ENST00000559550 DSCAML1Q8TD84 2053 aa0.71□□□□□ -2.3
CASC4-210ENST00000559550 EFCAB9A8MZ26 197 aa0.71□□□□□ -2.3
CASC4-210ENST00000559550 H0YC42 278 aa0.71□□□□□ -2.3
CASC4-210ENST00000559550 CCL2P13500 99 aa0.71□□□□□ -2.3
CASC4-210ENST00000559550 ATF1P18846 271 aa0.71□□□□□ -2.3
CASC4-210ENST00000559550 CRHBPP24387 322 aa0.71□□□□□ -2.3
CASC4-210ENST00000559550 CDK2P24941 298 aa0.71□□□□□ -2.3
CASC4-210ENST00000559550 LINC00313P59037 77 aa0.71□□□□□ -2.3
CASC4-210ENST00000559550 FGF12P61328 243 aa0.71□□□□□ -2.3
CASC4-210ENST00000559550 TNNC1P63316 161 aa0.71□□□□□ -2.3
CASC4-210ENST00000559550 Q6ZTI0 123 aa0.71□□□□□ -2.3
CASC4-210ENST00000559550 MRPL52Q86TS9 123 aaKnown RBP0.71□□□□□ -2.3
CASC4-210ENST00000559550 LRRC20Q8TCA0 184 aa0.71□□□□□ -2.3
CASC4-210ENST00000559550 TMEM239Q8WW34 195 aa0.71□□□□□ -2.3
CASC4-210ENST00000559550 FGF13Q92913 245 aa0.71□□□□□ -2.3
CASC4-210ENST00000559550 CHST5Q9GZS9 411 aa0.71□□□□□ -2.3
CASC4-210ENST00000559550 TMEM216Q9P0N5 145 aa0.71□□□□□ -2.3
CASC4-210ENST00000559550 MRM2Q9UI43 246 aaKnown RBP0.71□□□□□ -2.3
CASC4-210ENST00000559550 ENPP5Q9UJA9 477 aa0.71□□□□□ -2.3
CASC4-210ENST00000559550 ALG5Q9Y673 324 aa0.71□□□□□ -2.3
CASC4-210ENST00000559550 LINC00862A6NCI5 91 aa0.7□□□□□ -2.3
CASC4-210ENST00000559550 UBFD1O14562 309 aaKnown RBP0.7□□□□□ -2.3
CASC4-210ENST00000559550 ZW10O43264 779 aa0.7□□□□□ -2.3
CASC4-210ENST00000559550 LDOC1O95751 146 aaPredicted RBP0.7□□□□□ -2.3
CASC4-210ENST00000559550 CST4P01036 141 aa0.7□□□□□ -2.3
CASC4-210ENST00000559550 ZNF705DP0CH99 300 aaPredicted RBP0.7□□□□□ -2.3
CASC4-210ENST00000559550 ZNF705BP0CI00 300 aaPredicted RBP0.7□□□□□ -2.3
CASC4-210ENST00000559550 CCL3P10147 92 aa0.7□□□□□ -2.3
CASC4-210ENST00000559550 RCVRNP35243 200 aa0.7□□□□□ -2.3
CASC4-210ENST00000559550 MAGEA12P43365 314 aa0.7□□□□□ -2.3
CASC4-210ENST00000559550 RAP1GDS1P52306 607 aa0.7□□□□□ -2.3
CASC4-210ENST00000559550 FLOT2Q14254 428 aa0.7□□□□□ -2.3
CASC4-210ENST00000559550 UAP1Q16222 522 aaPredicted RBP0.7□□□□□ -2.3
CASC4-210ENST00000559550 FAM201AQ5SY85 155 aa0.7□□□□□ -2.3
CASC4-210ENST00000559550 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.7□□□□□ -2.3
CASC4-210ENST00000559550 XKRXQ6PP77 449 aa0.7□□□□□ -2.3
CASC4-210ENST00000559550 MTERF4Q7Z6M4 381 aaKnown RBP0.7□□□□□ -2.3
CASC4-210ENST00000559550 ST13P4Q8IZP2 240 aaPredicted RBP0.7□□□□□ -2.3
CASC4-210ENST00000559550 FNDC9Q8TBE3 224 aa0.7□□□□□ -2.3
CASC4-210ENST00000559550 TRNT1Q96Q11 434 aaKnown RBP0.7□□□□□ -2.3
CASC4-210ENST00000559550 RETNLBQ9BQ08 111 aa0.7□□□□□ -2.3
CASC4-210ENST00000559550 MND1Q9BWT6 205 aa0.7□□□□□ -2.3
CASC4-210ENST00000559550 SNX12Q9UMY4 172 aa0.7□□□□□ -2.3
CASC4-210ENST00000559550 POFUT2Q9Y2G5 429 aa0.7□□□□□ -2.3
CASC4-210ENST00000559550 TMEM235A6NFC5 223 aa0.69□□□□□ -2.3
CASC4-210ENST00000559550 ZNF705FA8MVS1 300 aaPredicted RBP0.69□□□□□ -2.3
CASC4-210ENST00000559550 NDUFS8O00217 210 aa0.69□□□□□ -2.3
CASC4-210ENST00000559550 SGCEO43556 437 aa0.69□□□□□ -2.3
CASC4-210ENST00000559550 SNAP29O95721 258 aa0.69□□□□□ -2.3
CASC4-210ENST00000559550 ZNF728P0DKX0 622 aa0.69□□□□□ -2.3
CASC4-210ENST00000559550 NPPCP23582 126 aa0.69□□□□□ -2.3
CASC4-210ENST00000559550 CRYBB3P26998 211 aa0.69□□□□□ -2.3
CASC4-210ENST00000559550 LCN1P31025 176 aa0.69□□□□□ -2.3
CASC4-210ENST00000559550 NUP62P37198 522 aaPredicted RBP0.69□□□□□ -2.3
CASC4-210ENST00000559550 OR1E2P47887 323 aa0.69□□□□□ -2.3
CASC4-210ENST00000559550 SERPINB10P48595 397 aa0.69□□□□□ -2.3
CASC4-210ENST00000559550 RPL14P50914 215 aaKnown RBP0.69□□□□□ -2.3
CASC4-210ENST00000559550 ZNF90Q03938 601 aa0.69□□□□□ -2.3
CASC4-210ENST00000559550 RAB31Q13636 194 aa0.69□□□□□ -2.3
CASC4-210ENST00000559550 LRRC6Q86X45 466 aa0.69□□□□□ -2.3
CASC4-210ENST00000559550 OR5K1Q8NHB7 308 aa0.69□□□□□ -2.3
CASC4-210ENST00000559550 C10orf105Q8TEF2 133 aa0.69□□□□□ -2.3
CASC4-210ENST00000559550 LINC00527Q9UJ94 153 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms