RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 CALRP27797 417 aaKnown RBP12.24□□□□□ -0.45
CSHL1-208ENST00000558609 PPP1CCP36873 323 aaKnown RBP12.24□□□□□ -0.45
CSHL1-208ENST00000558609 RANBP1P43487 201 aa12.24□□□□□ -0.45
CSHL1-208ENST00000558609 P2RY14Q15391 338 aa12.24□□□□□ -0.45
CSHL1-208ENST00000558609 RAB11BQ15907 218 aa12.24□□□□□ -0.45
CSHL1-208ENST00000558609 OXLD1Q5BKU9 147 aa12.24□□□□□ -0.45
CSHL1-208ENST00000558609 ZNF367Q7RTV3 350 aa12.24□□□□□ -0.45
CSHL1-208ENST00000558609 ZNF329Q86UD4 541 aa12.24□□□□□ -0.45
CSHL1-208ENST00000558609 FOXRED2Q8IWF2 684 aa12.24□□□□□ -0.45
CSHL1-208ENST00000558609 SVOPQ8N4V2 548 aa12.24□□□□□ -0.45
CSHL1-208ENST00000558609 NOL4LQ96MY1 436 aaPredicted RBP12.24□□□□□ -0.45
CSHL1-208ENST00000558609 ABHD14AQ9BUJ0 271 aa12.24□□□□□ -0.45
CSHL1-208ENST00000558609 YTHDF1Q9BYJ9 559 aaKnown RBP12.24□□□□□ -0.45
CSHL1-208ENST00000558609 ABCG5Q9H222 651 aa12.24□□□□□ -0.45
CSHL1-208ENST00000558609 RIMS4Q9H426 269 aaPredicted RBP12.24□□□□□ -0.45
CSHL1-208ENST00000558609 TRBV6-6A0A0A6YYG2 114 aa12.23□□□□□ -0.45
CSHL1-208ENST00000558609 LINC01548A6NM66 108 aa12.23□□□□□ -0.45
CSHL1-208ENST00000558609 FOXI3A8MTJ6 420 aaPredicted RBP12.23□□□□□ -0.45
CSHL1-208ENST00000558609 SOCS1O15524 211 aa12.23□□□□□ -0.45
CSHL1-208ENST00000558609 GPR12P47775 334 aa12.23□□□□□ -0.45
CSHL1-208ENST00000558609 PSMD7P51665 324 aa12.23□□□□□ -0.45
CSHL1-208ENST00000558609 SSX1Q16384 188 aa12.23□□□□□ -0.45
CSHL1-208ENST00000558609 Q6ZPA2 131 aa12.23□□□□□ -0.45
CSHL1-208ENST00000558609 MOB1BQ7L9L4 216 aa12.23□□□□□ -0.45
CSHL1-208ENST00000558609 ODF3L1Q8IXM7 274 aa12.23□□□□□ -0.45
CSHL1-208ENST00000558609 STPG2Q8N412 459 aa12.23□□□□□ -0.45
CSHL1-208ENST00000558609 COMMD1Q8N668 190 aa12.23□□□□□ -0.45
CSHL1-208ENST00000558609 S1PR3Q99500 378 aa12.23□□□□□ -0.45
CSHL1-208ENST00000558609 ABRACLQ9P1F3 81 aa12.23□□□□□ -0.45
CSHL1-208ENST00000558609 HSF4Q9ULV5 492 aa12.23□□□□□ -0.45
CSHL1-208ENST00000558609 V9GY05 133 aa12.23□□□□□ -0.45
CSHL1-208ENST00000558609 AP4M1O00189 453 aa12.22□□□□□ -0.45
CSHL1-208ENST00000558609 MRPS14O60783 128 aaKnown RBP12.22□□□□□ -0.45
CSHL1-208ENST00000558609 CD33P20138 364 aa12.22□□□□□ -0.45
CSHL1-208ENST00000558609 F2RL1P55085 397 aa12.22□□□□□ -0.45
CSHL1-208ENST00000558609 SLC35B1P78383 322 aa12.22□□□□□ -0.45
CSHL1-208ENST00000558609 LSAMPQ13449 338 aa12.22□□□□□ -0.45
CSHL1-208ENST00000558609 KHDC1LQ5JSQ8 128 aa12.22□□□□□ -0.45
CSHL1-208ENST00000558609 FAM71E2Q8N5Q1 922 aa12.22□□□□□ -0.45
CSHL1-208ENST00000558609 OR51D1Q8NGF3 324 aa12.22□□□□□ -0.45
CSHL1-208ENST00000558609 FAM3DQ96BQ1 224 aa12.22□□□□□ -0.45
CSHL1-208ENST00000558609 RASL11BQ9BPW5 248 aa12.22□□□□□ -0.45
CSHL1-208ENST00000558609 CHMP1AQ9HD42 196 aaPredicted RBP12.22□□□□□ -0.45
CSHL1-208ENST00000558609 ZFP57Q9NU63 452 aa12.22□□□□□ -0.45
CSHL1-208ENST00000558609 STEAP1Q9UHE8 339 aa12.22□□□□□ -0.45
CSHL1-208ENST00000558609 AK3Q9UIJ7 227 aa12.22□□□□□ -0.45
CSHL1-208ENST00000558609 LINC00527Q9UJ94 153 aa12.22□□□□□ -0.45
CSHL1-208ENST00000558609 NBEAL2Q6ZNJ1 2754 aa12.21□□□□□ -0.45
CSHL1-208ENST00000558609 TRAV1-2A0A0B4J238 106 aa12.21□□□□□ -0.45
CSHL1-208ENST00000558609 LDLRAD4O15165 306 aa12.21□□□□□ -0.45
CSHL1-208ENST00000558609 PF4P02776 101 aa12.21□□□□□ -0.45
CSHL1-208ENST00000558609 TMEM50BP56557 158 aa12.21□□□□□ -0.45
CSHL1-208ENST00000558609 GABARAPL2P60520 117 aa12.21□□□□□ -0.45
CSHL1-208ENST00000558609 RPL23AP62750 156 aaKnown RBP12.21□□□□□ -0.45
CSHL1-208ENST00000558609 C2orf76Q3KRA6 126 aa12.21□□□□□ -0.45
CSHL1-208ENST00000558609 CD200R1LQ6Q8B3 271 aa12.21□□□□□ -0.45
CSHL1-208ENST00000558609 ZNF833PQ6ZTB9 187 aa12.21□□□□□ -0.45
CSHL1-208ENST00000558609 REC114Q7Z4M0 266 aa12.21□□□□□ -0.45
CSHL1-208ENST00000558609 OR2AK2Q8NG84 335 aa12.21□□□□□ -0.45
CSHL1-208ENST00000558609 IL1F10Q8WWZ1 152 aa12.21□□□□□ -0.45
CSHL1-208ENST00000558609 GON7Q9BXV9 100 aa12.21□□□□□ -0.45
CSHL1-208ENST00000558609 NDUFB11Q9NX14 153 aa12.21□□□□□ -0.45
CSHL1-208ENST00000558609 MGAT4AQ9UM21 535 aa12.21□□□□□ -0.45
CSHL1-208ENST00000558609 RYR3Q15413 4870 aa12.2□□□□□ -0.46
CSHL1-208ENST00000558609 SLC6A1P30531 599 aa12.2□□□□□ -0.46
CSHL1-208ENST00000558609 VEGFCP49767 419 aa12.2□□□□□ -0.46
CSHL1-208ENST00000558609 CLDN12P56749 244 aa12.2□□□□□ -0.46
CSHL1-208ENST00000558609 TSPAN14Q8NG11 270 aa12.2□□□□□ -0.46
CSHL1-208ENST00000558609 SETD6Q8TBK2 473 aa12.2□□□□□ -0.46
CSHL1-208ENST00000558609 PHF21AQ96BD5 680 aa12.2□□□□□ -0.46
CSHL1-208ENST00000558609 RBMXL1Q96E39 390 aaKnown RBP12.2□□□□□ -0.46
CSHL1-208ENST00000558609 NABP2Q9BQ15 211 aa12.2□□□□□ -0.46
CSHL1-208ENST00000558609 HDHD3Q9BSH5 251 aaPredicted RBP12.2□□□□□ -0.46
CSHL1-208ENST00000558609 MRPL20Q9BYC9 149 aaKnown RBP12.2□□□□□ -0.46
CSHL1-208ENST00000558609 IFI27L2Q9H2X8 130 aa12.2□□□□□ -0.46
CSHL1-208ENST00000558609 A0A087WXM4 84 aa12.19□□□□□ -0.46
CSHL1-208ENST00000558609 SAA2-SAA4A0A096LPE2 208 aa12.19□□□□□ -0.46
CSHL1-208ENST00000558609 TRDV1A0A1B0GX56 115 aa12.19□□□□□ -0.46
CSHL1-208ENST00000558609 ITGB1BP1O14713 200 aa12.19□□□□□ -0.46
CSHL1-208ENST00000558609 PDCD5O14737 125 aa12.19□□□□□ -0.46
CSHL1-208ENST00000558609 SAA2P0DJI9 122 aaPredicted RBP12.19□□□□□ -0.46
CSHL1-208ENST00000558609 IGLL1P15814 213 aa12.19□□□□□ -0.46
CSHL1-208ENST00000558609 GALP22466 123 aa12.19□□□□□ -0.46
CSHL1-208ENST00000558609 SOX6P35712 828 aa12.19□□□□□ -0.46
CSHL1-208ENST00000558609 OR3A3P47888 321 aa12.19□□□□□ -0.46
CSHL1-208ENST00000558609 PNLIPRP3Q17RR3 467 aa12.19□□□□□ -0.46
CSHL1-208ENST00000558609 FAM71F2Q6NXP2 309 aa12.19□□□□□ -0.46
CSHL1-208ENST00000558609 TEX38Q6PEX7 206 aa12.19□□□□□ -0.46
CSHL1-208ENST00000558609 OR56B1Q8NGI3 324 aa12.19□□□□□ -0.46
CSHL1-208ENST00000558609 RCC1LQ96I51 464 aaKnown RBP12.19□□□□□ -0.46
CSHL1-208ENST00000558609 ARHGAP5-AS1Q96IT6 56 aa12.19□□□□□ -0.46
CSHL1-208ENST00000558609 PECRQ9BY49 303 aa12.19□□□□□ -0.46
CSHL1-208ENST00000558609 GHITMQ9H3K2 345 aa12.19□□□□□ -0.46
CSHL1-208ENST00000558609 Q9N2K0 584 aa12.19□□□□□ -0.46
CSHL1-208ENST00000558609 C12orf4Q9NQ89 552 aa12.19□□□□□ -0.46
CSHL1-208ENST00000558609 NECAP2Q9NVZ3 263 aa12.19□□□□□ -0.46
CSHL1-208ENST00000558609 PIPOXQ9P0Z9 390 aa12.19□□□□□ -0.46
CSHL1-208ENST00000558609 SLC23A1Q9UHI7 598 aa12.19□□□□□ -0.46
CSHL1-208ENST00000558609 ZNF580Q9UK33 172 aa12.19□□□□□ -0.46
CSHL1-208ENST00000558609 RAB22AQ9UL26 194 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms