RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 BRS3P32247 399 aa11.2□□□□□ -0.62
TUBB3-202ENST00000553656 PRSS3P35030 304 aa11.2□□□□□ -0.62
TUBB3-202ENST00000553656 RAB7AP51149 207 aa11.2□□□□□ -0.62
TUBB3-202ENST00000553656 SRSF2Q01130 221 aaKnown RBP11.2□□□□□ -0.62
TUBB3-202ENST00000553656 LY6G6FQ5SQ64 297 aa11.2□□□□□ -0.62
TUBB3-202ENST00000553656 LDLRAD2Q5SZI1 272 aa11.2□□□□□ -0.62
TUBB3-202ENST00000553656 FAM53AQ6NSI3 398 aaPredicted RBP11.2□□□□□ -0.62
TUBB3-202ENST00000553656 SLC25A48Q6ZT89 311 aaKnown RBP11.2□□□□□ -0.62
TUBB3-202ENST00000553656 SNX29P2Q8IUI4 249 aa11.2□□□□□ -0.62
TUBB3-202ENST00000553656 LYG1Q8N1E2 194 aa11.2□□□□□ -0.62
TUBB3-202ENST00000553656 OR10J5Q8NHC4 309 aa11.2□□□□□ -0.62
TUBB3-202ENST00000553656 C15orf40Q8WUR7 153 aa11.2□□□□□ -0.62
TUBB3-202ENST00000553656 ZFAND2BQ8WV99 257 aa11.2□□□□□ -0.62
TUBB3-202ENST00000553656 DGCR14Q96DF8 476 aaKnown RBP11.2□□□□□ -0.62
TUBB3-202ENST00000553656 AJUBAQ96IF1 538 aa11.2□□□□□ -0.62
TUBB3-202ENST00000553656 SLIRPQ9GZT3 109 aaKnown RBP11.2□□□□□ -0.62
TUBB3-202ENST00000553656 OR1A1Q9P1Q5 309 aa11.2□□□□□ -0.62
TUBB3-202ENST00000553656 NF1P21359 2839 aa11.2□□□□□ -0.62
TUBB3-202ENST00000553656 DPPA5A6NC42 116 aa11.19□□□□□ -0.62
TUBB3-202ENST00000553656 VGLL3A8MV65 326 aa11.19□□□□□ -0.62
TUBB3-202ENST00000553656 SLC31A2O15432 143 aa11.19□□□□□ -0.62
TUBB3-202ENST00000553656 SSX5O60225 188 aa11.19□□□□□ -0.62
TUBB3-202ENST00000553656 RNASE1P07998 156 aaKnown RBP11.19□□□□□ -0.62
TUBB3-202ENST00000553656 CTXN2P0C2S0 81 aa11.19□□□□□ -0.62
TUBB3-202ENST00000553656 PAX6P26367 422 aa11.19□□□□□ -0.62
TUBB3-202ENST00000553656 CEACAM6P40199 344 aa11.19□□□□□ -0.62
TUBB3-202ENST00000553656 ARPC4P59998 168 aa11.19□□□□□ -0.62
TUBB3-202ENST00000553656 CT45A1Q5HYN5 189 aa11.19□□□□□ -0.62
TUBB3-202ENST00000553656 LAX1Q8IWV1 398 aa11.19□□□□□ -0.62
TUBB3-202ENST00000553656 ZNF439Q8NDP4 499 aa11.19□□□□□ -0.62
TUBB3-202ENST00000553656 BEST4Q8NFU0 473 aa11.19□□□□□ -0.62
TUBB3-202ENST00000553656 CT45A3Q8NHU0 189 aa11.19□□□□□ -0.62
TUBB3-202ENST00000553656 CABLES2Q9BTV7 478 aa11.19□□□□□ -0.62
TUBB3-202ENST00000553656 VPREB3Q9UKI3 123 aa11.19□□□□□ -0.62
TUBB3-202ENST00000553656 LY6LH3BQJ8 138 aa11.18□□□□□ -0.62
TUBB3-202ENST00000553656 CTDSP2O14595 271 aa11.18□□□□□ -0.62
TUBB3-202ENST00000553656 HSD17B6O14756 317 aa11.18□□□□□ -0.62
TUBB3-202ENST00000553656 TXNL1O43396 289 aa11.18□□□□□ -0.62
TUBB3-202ENST00000553656 GAPDHP04406 335 aaKnown RBP11.18□□□□□ -0.62
TUBB3-202ENST00000553656 CRYBA1P05813 215 aa11.18□□□□□ -0.62
TUBB3-202ENST00000553656 PTHLHP12272 177 aa11.18□□□□□ -0.62
TUBB3-202ENST00000553656 HERPUD1Q15011 391 aa11.18□□□□□ -0.62
TUBB3-202ENST00000553656 IGSF11Q5DX21 431 aa11.18□□□□□ -0.62
TUBB3-202ENST00000553656 CNIH2Q6PI25 160 aa11.18□□□□□ -0.62
TUBB3-202ENST00000553656 HOGA1Q86XE5 327 aa11.18□□□□□ -0.62
TUBB3-202ENST00000553656 OR8H3Q8N146 312 aa11.18□□□□□ -0.62
TUBB3-202ENST00000553656 DYNAPQ8N1N2 210 aa11.18□□□□□ -0.62
TUBB3-202ENST00000553656 FAM216AQ8WUB2 273 aa11.18□□□□□ -0.62
TUBB3-202ENST00000553656 TMEM158Q8WZ71 300 aa11.18□□□□□ -0.62
TUBB3-202ENST00000553656 CHIAQ9BZP6 476 aa11.18□□□□□ -0.62
TUBB3-202ENST00000553656 SCPEP1Q9HB40 452 aa11.18□□□□□ -0.62
TUBB3-202ENST00000553656 RDH8Q9NYR8 311 aa11.18□□□□□ -0.62
TUBB3-202ENST00000553656 ANXA10Q9UJ72 324 aa11.18□□□□□ -0.62
TUBB3-202ENST00000553656 PITPNC1Q9UKF7 332 aa11.18□□□□□ -0.62
TUBB3-202ENST00000553656 RBM7Q9Y580 266 aaKnown RBP11.18□□□□□ -0.62
TUBB3-202ENST00000553656 MXRA5Q9NR99 2828 aa11.17□□□□□ -0.62
TUBB3-202ENST00000553656 IGKV1D-8A0A087WSZ0 117 aa11.17□□□□□ -0.62
TUBB3-202ENST00000553656 TRBV6-7A0A0A0MS04 114 aa11.17□□□□□ -0.62
TUBB3-202ENST00000553656 IGKV1-6A0A0C4DH72 117 aa11.17□□□□□ -0.62
TUBB3-202ENST00000553656 MEIS3P1A6NDR6 274 aa11.17□□□□□ -0.62
TUBB3-202ENST00000553656 ITGB1BP1O14713 200 aa11.17□□□□□ -0.62
TUBB3-202ENST00000553656 ST8SIA5O15466 376 aa11.17□□□□□ -0.62
TUBB3-202ENST00000553656 TPPPO94811 219 aa11.17□□□□□ -0.62
TUBB3-202ENST00000553656 HLA-DQB1P01920 261 aa11.17□□□□□ -0.62
TUBB3-202ENST00000553656 S100A5P33763 92 aa11.17□□□□□ -0.62
TUBB3-202ENST00000553656 REG1BP48304 166 aa11.17□□□□□ -0.62
TUBB3-202ENST00000553656 DYNLT3P51808 116 aa11.17□□□□□ -0.62
TUBB3-202ENST00000553656 ZNF134P52741 427 aa11.17□□□□□ -0.62
TUBB3-202ENST00000553656 ACTG1P63261 375 aa11.17□□□□□ -0.62
TUBB3-202ENST00000553656 LY6EQ16553 131 aa11.17□□□□□ -0.62
TUBB3-202ENST00000553656 C16orf87Q6PH81 154 aa11.17□□□□□ -0.62
TUBB3-202ENST00000553656 TGIF2LXQ8IUE1 241 aa11.17□□□□□ -0.62
TUBB3-202ENST00000553656 GVQW1Q8N7I0 195 aa11.17□□□□□ -0.62
TUBB3-202ENST00000553656 GCDHQ92947 438 aaPredicted RBP11.17□□□□□ -0.62
TUBB3-202ENST00000553656 DIRAS2Q96HU8 199 aa11.17□□□□□ -0.62
TUBB3-202ENST00000553656 MIXL1Q9H2W2 232 aa11.17□□□□□ -0.62
TUBB3-202ENST00000553656 GHITMQ9H3K2 345 aa11.17□□□□□ -0.62
TUBB3-202ENST00000553656 RAB18Q9NP72 206 aa11.17□□□□□ -0.62
TUBB3-202ENST00000553656 PIPOXQ9P0Z9 390 aa11.17□□□□□ -0.62
TUBB3-202ENST00000553656 RABL2AQ9UBK7 228 aaPredicted RBP11.17□□□□□ -0.62
TUBB3-202ENST00000553656 ZNF221Q9UK13 617 aa11.17□□□□□ -0.62
TUBB3-202ENST00000553656 RABL2BQ9UNT1 228 aa11.17□□□□□ -0.62
TUBB3-202ENST00000553656 ZFHX3Q15911 3703 aa11.16□□□□□ -0.62
TUBB3-202ENST00000553656 RNF212BA8MTL3 300 aa11.16□□□□□ -0.62
TUBB3-202ENST00000553656 SULT1C2O00338 296 aa11.16□□□□□ -0.62
TUBB3-202ENST00000553656 RAB29O14966 203 aa11.16□□□□□ -0.62
TUBB3-202ENST00000553656 FCER2P06734 321 aa11.16□□□□□ -0.62
TUBB3-202ENST00000553656 FAM106CPP0CH98 169 aa11.16□□□□□ -0.62
TUBB3-202ENST00000553656 RAB13P51153 203 aa11.16□□□□□ -0.62
TUBB3-202ENST00000553656 ZNF137PP52743 207 aa11.16□□□□□ -0.62
TUBB3-202ENST00000553656 ZNF816Q0VGE8 651 aaPredicted RBP11.16□□□□□ -0.62
TUBB3-202ENST00000553656 LIAT1Q6ZQX7 453 aa11.16□□□□□ -0.62
TUBB3-202ENST00000553656 MOB3BQ86TA1 216 aa11.16□□□□□ -0.62
TUBB3-202ENST00000553656 CAPSLQ8WWF8 208 aa11.16□□□□□ -0.62
TUBB3-202ENST00000553656 RTN4IP1Q8WWV3 396 aaPredicted RBP11.16□□□□□ -0.62
TUBB3-202ENST00000553656 S1PR3Q99500 378 aa11.16□□□□□ -0.62
TUBB3-202ENST00000553656 NXF2Q9GZY0 626 aaKnown RBP11.16□□□□□ -0.62
TUBB3-202ENST00000553656 C11orf54Q9H0W9 315 aaPredicted RBP11.16□□□□□ -0.62
TUBB3-202ENST00000553656 IFI27L2Q9H2X8 130 aa11.16□□□□□ -0.62
TUBB3-202ENST00000553656 MMP27Q9H306 513 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms