RNA–Protein interactions for RNA: ENST00000552045.1

LIMA1-210, Transcript of LIM domain and actin binding 1, humanhuman

TSL 2

Gene LIMA1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-210ENST00000552045 OR5H14A6NHG9 310 aa3.48□□□□□ -1.85
LIMA1-210ENST00000552045 A8MWP4 228 aa3.48□□□□□ -1.85
LIMA1-210ENST00000552045 ARL6IP5O75915 188 aa3.48□□□□□ -1.85
LIMA1-210ENST00000552045 AHSA1O95433 338 aa3.48□□□□□ -1.85
LIMA1-210ENST00000552045 IGKV1D-33P01593 117 aa3.48□□□□□ -1.85
LIMA1-210ENST00000552045 IGKV1-33P01594 117 aa3.48□□□□□ -1.85
LIMA1-210ENST00000552045 PFN1P07737 140 aaKnown RBP3.48□□□□□ -1.85
LIMA1-210ENST00000552045 CD34P28906 385 aa3.48□□□□□ -1.85
LIMA1-210ENST00000552045 EVI2BP34910 448 aa3.48□□□□□ -1.85
LIMA1-210ENST00000552045 SULT1A2P50226 295 aa3.48□□□□□ -1.85
LIMA1-210ENST00000552045 MYL6P60660 151 aa3.48□□□□□ -1.85
LIMA1-210ENST00000552045 MLLT11Q13015 90 aaPredicted RBP3.48□□□□□ -1.85
LIMA1-210ENST00000552045 ZCWPW2Q504Y3 356 aa3.48□□□□□ -1.85
LIMA1-210ENST00000552045 COQ5Q5HYK3 327 aa3.48□□□□□ -1.85
LIMA1-210ENST00000552045 LDLRAD2Q5SZI1 272 aa3.48□□□□□ -1.85
LIMA1-210ENST00000552045 HES3Q5TGS1 186 aa3.48□□□□□ -1.85
LIMA1-210ENST00000552045 CPNE9Q8IYJ1 553 aa3.48□□□□□ -1.85
LIMA1-210ENST00000552045 OR4C13Q8NGP0 309 aa3.48□□□□□ -1.85
LIMA1-210ENST00000552045 CMBLQ96DG6 245 aa3.48□□□□□ -1.85
LIMA1-210ENST00000552045 DHRS9Q9BPW9 319 aa3.48□□□□□ -1.85
LIMA1-210ENST00000552045 GABARAPL1Q9H0R8 117 aa3.48□□□□□ -1.85
LIMA1-210ENST00000552045 MARCOQ9UEW3 520 aaPredicted RBP3.48□□□□□ -1.85
LIMA1-210ENST00000552045 GLS2Q9UI32 602 aa3.48□□□□□ -1.85
LIMA1-210ENST00000552045 SNX10Q9Y5X0 201 aa3.48□□□□□ -1.85
LIMA1-210ENST00000552045 ICOSQ9Y6W8 199 aa3.48□□□□□ -1.85
LIMA1-210ENST00000552045 MYO5BQ9ULV0 1848 aa3.48□□□□□ -1.85
LIMA1-210ENST00000552045 CLTCQ00610 1675 aaKnown RBP3.48□□□□□ -1.85
LIMA1-210ENST00000552045 ADGBQ8N7X0 1667 aa3.48□□□□□ -1.85
LIMA1-210ENST00000552045 ABCA6Q8N139 1617 aa3.48□□□□□ -1.85
LIMA1-210ENST00000552045 SPHKAPQ2M3C7 1700 aa3.47□□□□□ -1.85
LIMA1-210ENST00000552045 FMN1Q68DA7 1419 aa3.47□□□□□ -1.85
LIMA1-210ENST00000552045 OR6C70A6NIJ9 312 aa3.47□□□□□ -1.85
LIMA1-210ENST00000552045 ARGFXA6NJG6 315 aa3.47□□□□□ -1.85
LIMA1-210ENST00000552045 ZNF729A6NN14 1252 aaPredicted RBP3.47□□□□□ -1.85
LIMA1-210ENST00000552045 H0Y980 276 aa3.47□□□□□ -1.85
LIMA1-210ENST00000552045 SLC16A4O15374 487 aa3.47□□□□□ -1.85
LIMA1-210ENST00000552045 PDYNP01213 254 aa3.47□□□□□ -1.85
LIMA1-210ENST00000552045 LTAP01374 205 aa3.47□□□□□ -1.85
LIMA1-210ENST00000552045 APOEP02649 317 aa3.47□□□□□ -1.85
LIMA1-210ENST00000552045 S100A6P06703 90 aa3.47□□□□□ -1.85
LIMA1-210ENST00000552045 C8orf88P0DMB2 117 aa3.47□□□□□ -1.85
LIMA1-210ENST00000552045 CD79BP40259 229 aa3.47□□□□□ -1.85
LIMA1-210ENST00000552045 BLVRAP53004 296 aa3.47□□□□□ -1.85
LIMA1-210ENST00000552045 KRTAP13-2Q52LG2 175 aa3.47□□□□□ -1.85
LIMA1-210ENST00000552045 SPATA31B1PQ5VZV4 182 aa3.47□□□□□ -1.85
LIMA1-210ENST00000552045 SCGB1D4Q6XE38 83 aa3.47□□□□□ -1.85
LIMA1-210ENST00000552045 Q8N402 240 aa3.47□□□□□ -1.85
LIMA1-210ENST00000552045 KRTCAP2Q8N6L1 136 aa3.47□□□□□ -1.85
LIMA1-210ENST00000552045 DNAAF3Q8N9W5 541 aa3.47□□□□□ -1.85
LIMA1-210ENST00000552045 FER1L6-AS1Q8NA97 138 aa3.47□□□□□ -1.85
LIMA1-210ENST00000552045 OR4A5Q8NH83 315 aa3.47□□□□□ -1.85
LIMA1-210ENST00000552045 SPPL2BQ8TCT7 592 aa3.47□□□□□ -1.85
LIMA1-210ENST00000552045 KCTD4Q8WVF5 259 aa3.47□□□□□ -1.85
LIMA1-210ENST00000552045 TNFAIP8L1Q8WVP5 186 aa3.47□□□□□ -1.85
LIMA1-210ENST00000552045 GALMQ96C23 342 aa3.47□□□□□ -1.85
LIMA1-210ENST00000552045 PACRGQ96M98 296 aaPredicted RBP3.47□□□□□ -1.85
LIMA1-210ENST00000552045 B9D2Q9BPU9 175 aa3.47□□□□□ -1.85
LIMA1-210ENST00000552045 ALX4Q9H161 411 aaPredicted RBP3.47□□□□□ -1.85
LIMA1-210ENST00000552045 NCOA3Q9Y6Q9 1424 aa3.46□□□□□ -1.86
LIMA1-210ENST00000552045 BIVM-ERCC5R4GMW8 1640 aa3.46□□□□□ -1.86
LIMA1-210ENST00000552045 F5H5T6 163 aa3.46□□□□□ -1.86
LIMA1-210ENST00000552045 M0QZ92 97 aa3.46□□□□□ -1.86
LIMA1-210ENST00000552045 SSNA1O43805 119 aa3.46□□□□□ -1.86
LIMA1-210ENST00000552045 GPR75O95800 540 aa3.46□□□□□ -1.86
LIMA1-210ENST00000552045 MAGOHP61326 146 aaKnown RBP3.46□□□□□ -1.86
LIMA1-210ENST00000552045 TRMT12Q53H54 448 aaKnown RBP3.46□□□□□ -1.86
LIMA1-210ENST00000552045 TMEM136Q6ZRR5 245 aa3.46□□□□□ -1.86
LIMA1-210ENST00000552045 ADM2Q7Z4H4 148 aa3.46□□□□□ -1.86
LIMA1-210ENST00000552045 ZBTB8OSQ8IWT0 167 aa3.46□□□□□ -1.86
LIMA1-210ENST00000552045 SLC37A2Q8TED4 501 aa3.46□□□□□ -1.86
LIMA1-210ENST00000552045 CYGBQ8WWM9 190 aa3.46□□□□□ -1.86
LIMA1-210ENST00000552045 ASB13Q8WXK3 278 aa3.46□□□□□ -1.86
LIMA1-210ENST00000552045 MROQ9BYG7 248 aa3.46□□□□□ -1.86
LIMA1-210ENST00000552045 OR2D2Q9H210 308 aa3.46□□□□□ -1.86
LIMA1-210ENST00000552045 ZNF492Q9P255 531 aa3.46□□□□□ -1.86
LIMA1-210ENST00000552045 ZNF230Q9UIE0 474 aaPredicted RBP3.46□□□□□ -1.86
LIMA1-210ENST00000552045 POLR3HQ9Y535 204 aaPredicted RBP3.46□□□□□ -1.86
LIMA1-210ENST00000552045 WDR90Q96KV7 1748 aa3.46□□□□□ -1.86
LIMA1-210ENST00000552045 CACNA1AO00555 2505 aa3.46□□□□□ -1.86
LIMA1-210ENST00000552045 PCNTO95613 3336 aa3.46□□□□□ -1.86
LIMA1-210ENST00000552045 PZPP20742 1482 aa3.46□□□□□ -1.86
LIMA1-210ENST00000552045 ARHGAP35Q9NRY4 1499 aa3.46□□□□□ -1.86
LIMA1-210ENST00000552045 MYOM1P52179 1685 aa3.46□□□□□ -1.86
LIMA1-210ENST00000552045 ABCC5O15440 1437 aa3.45□□□□□ -1.86
LIMA1-210ENST00000552045 ASXL1Q8IXJ9 1541 aa3.45□□□□□ -1.86
LIMA1-210ENST00000552045 MROH1Q8NDA8 1641 aa3.45□□□□□ -1.86
LIMA1-210ENST00000552045 H2BFSP57053 126 aa3.45□□□□□ -1.86
LIMA1-210ENST00000552045 ZFAND6Q6FIF0 208 aa3.45□□□□□ -1.86
LIMA1-210ENST00000552045 EBLN2Q6P2I7 272 aa3.45□□□□□ -1.86
LIMA1-210ENST00000552045 PAGE2Q7Z2X7 111 aa3.45□□□□□ -1.86
LIMA1-210ENST00000552045 DOLPP1Q86YN1 238 aa3.45□□□□□ -1.86
LIMA1-210ENST00000552045 YIPF7Q8N8F6 280 aa3.45□□□□□ -1.86
LIMA1-210ENST00000552045 ERMNQ8TAM6 284 aa3.45□□□□□ -1.86
LIMA1-210ENST00000552045 RNF133Q8WVZ7 376 aa3.45□□□□□ -1.86
LIMA1-210ENST00000552045 APOBEC3DQ96AK3 386 aaPredicted RBP3.45□□□□□ -1.86
LIMA1-210ENST00000552045 TRIM45Q9H8W5 580 aaPredicted RBP3.45□□□□□ -1.86
LIMA1-210ENST00000552045 FGFR1OP2Q9NVK5 253 aa3.45□□□□□ -1.86
LIMA1-210ENST00000552045 PRO0461Q9UI25 63 aa3.45□□□□□ -1.86
LIMA1-210ENST00000552045 NCOA2Q15596 1464 aa3.45□□□□□ -1.86
LIMA1-210ENST00000552045 KDM5AP29375 1690 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms