RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 YPEL2Q96QA6 119 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 NABP2Q9BQ15 211 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 ANKRD60Q9BZ19 345 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 CST11Q9H112 138 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 ISYNA1Q9NPH2 558 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 PARP11Q9NR21 331 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 ERGIC3Q9Y282 383 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 BLVRBP30043 206 aaPredicted RBP9.96□□□□□ -0.82
PTCH1-221ENST00000550914 C19orf54Q5BKX5 351 aa9.96□□□□□ -0.82
PTCH1-221ENST00000550914 AWAT2Q6E213 333 aa9.96□□□□□ -0.82
PTCH1-221ENST00000550914 LIN54Q6MZP7 749 aa9.96□□□□□ -0.82
PTCH1-221ENST00000550914 FAM71F2Q6NXP2 309 aa9.96□□□□□ -0.82
PTCH1-221ENST00000550914 ZNF833PQ6ZTB9 187 aa9.96□□□□□ -0.82
PTCH1-221ENST00000550914 LYPD6Q86Y78 171 aa9.96□□□□□ -0.82
PTCH1-221ENST00000550914 SBSPONQ8IVN8 264 aa9.96□□□□□ -0.82
PTCH1-221ENST00000550914 TCTEX1D1Q8N7M0 179 aa9.96□□□□□ -0.82
PTCH1-221ENST00000550914 ZNF485Q8NCK3 441 aa9.96□□□□□ -0.82
PTCH1-221ENST00000550914 ZNF555Q8NEP9 628 aa9.96□□□□□ -0.82
PTCH1-221ENST00000550914 DCUN1D4Q92564 292 aa9.96□□□□□ -0.82
PTCH1-221ENST00000550914 PGLYRP3Q96LB9 341 aa9.96□□□□□ -0.82
PTCH1-221ENST00000550914 RCHY1Q96PM5 261 aa9.96□□□□□ -0.82
PTCH1-221ENST00000550914 UQCC2Q9BRT2 126 aa9.96□□□□□ -0.82
PTCH1-221ENST00000550914 MRPL20Q9BYC9 149 aaKnown RBP9.96□□□□□ -0.82
PTCH1-221ENST00000550914 SELENOIQ9C0D9 397 aa9.96□□□□□ -0.82
PTCH1-221ENST00000550914 KIAA1456Q9P272 454 aa9.96□□□□□ -0.82
PTCH1-221ENST00000550914 RYR2Q92736 4967 aa9.95□□□□□ -0.82
PTCH1-221ENST00000550914 TNCP24821 2201 aa9.95□□□□□ -0.82
PTCH1-221ENST00000550914 PDCD6O75340 191 aa9.95□□□□□ -0.82
PTCH1-221ENST00000550914 CRTAPO75718 401 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-221ENST00000550914 PPP1CCP36873 323 aaKnown RBP9.95□□□□□ -0.82
PTCH1-221ENST00000550914 TAS2R43P59537 309 aa9.95□□□□□ -0.82
PTCH1-221ENST00000550914 DOC2BQ14184 412 aa9.95□□□□□ -0.82
PTCH1-221ENST00000550914 GNMTQ14749 295 aa9.95□□□□□ -0.82
PTCH1-221ENST00000550914 C6orf141Q5SZD1 244 aa9.95□□□□□ -0.82
PTCH1-221ENST00000550914 ZNF660Q6AZW8 331 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-221ENST00000550914 SIGIRRQ6IA17 410 aa9.95□□□□□ -0.82
PTCH1-221ENST00000550914 PQLC1Q8N2U9 271 aa9.95□□□□□ -0.82
PTCH1-221ENST00000550914 NKAIN3Q8N8D7 197 aa9.95□□□□□ -0.82
PTCH1-221ENST00000550914 OR52L2PQ8NGH6 319 aa9.95□□□□□ -0.82
PTCH1-221ENST00000550914 MRPL30Q8TCC3 161 aaKnown RBP9.95□□□□□ -0.82
PTCH1-221ENST00000550914 THRSPQ92748 146 aa9.95□□□□□ -0.82
PTCH1-221ENST00000550914 GALMQ96C23 342 aa9.95□□□□□ -0.82
PTCH1-221ENST00000550914 RBMXL1Q96E39 390 aaKnown RBP9.95□□□□□ -0.82
PTCH1-221ENST00000550914 RITA1Q96K30 269 aa9.95□□□□□ -0.82
PTCH1-221ENST00000550914 OR5B12Q96R08 314 aa9.95□□□□□ -0.82
PTCH1-221ENST00000550914 OR14A2Q96R54 314 aa9.95□□□□□ -0.82
PTCH1-221ENST00000550914 TOLLIPQ9H0E2 274 aa9.95□□□□□ -0.82
PTCH1-221ENST00000550914 GHITMQ9H3K2 345 aa9.95□□□□□ -0.82
PTCH1-221ENST00000550914 BANF2Q9H503 90 aa9.95□□□□□ -0.82
PTCH1-221ENST00000550914 SMPD3Q9NY59 655 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-221ENST00000550914 GHRLQ9UBU3 117 aa9.95□□□□□ -0.82
PTCH1-221ENST00000550914 CLEC2DQ9UHP7 191 aa9.95□□□□□ -0.82
PTCH1-221ENST00000550914 SAA2-SAA4A0A096LPE2 208 aa9.94□□□□□ -0.82
PTCH1-221ENST00000550914 UBE2QL1A1L167 161 aa9.94□□□□□ -0.82
PTCH1-221ENST00000550914 LINC01619G3V211 115 aa9.94□□□□□ -0.82
PTCH1-221ENST00000550914 ARPC1BO15143 372 aaKnown RBP9.94□□□□□ -0.82
PTCH1-221ENST00000550914 SAP30O75446 220 aa9.94□□□□□ -0.82
PTCH1-221ENST00000550914 MAS1P04201 325 aa9.94□□□□□ -0.82
PTCH1-221ENST00000550914 CD1AP06126 327 aa9.94□□□□□ -0.82
PTCH1-221ENST00000550914 LGALS1P09382 135 aaKnown RBP9.94□□□□□ -0.82
PTCH1-221ENST00000550914 SAA2P0DJI9 122 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-221ENST00000550914 CNTFRP26992 372 aa9.94□□□□□ -0.82
PTCH1-221ENST00000550914 CAPGP40121 348 aa9.94□□□□□ -0.82
PTCH1-221ENST00000550914 PYHIN1Q6K0P9 492 aa9.94□□□□□ -0.82
PTCH1-221ENST00000550914 ACSM6Q6P461 480 aa9.94□□□□□ -0.82
PTCH1-221ENST00000550914 OR2AK2Q8NG84 335 aa9.94□□□□□ -0.82
PTCH1-221ENST00000550914 OR6Q1Q8NGQ2 317 aa9.94□□□□□ -0.82
PTCH1-221ENST00000550914 DLX4Q92988 240 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-221ENST00000550914 TMEM80Q96HE8 168 aa9.94□□□□□ -0.82
PTCH1-221ENST00000550914 DERL3Q96Q80 235 aa9.94□□□□□ -0.82
PTCH1-221ENST00000550914 ZMAT4Q9H898 229 aa9.94□□□□□ -0.82
PTCH1-221ENST00000550914 S100A14Q9HCY8 104 aa9.94□□□□□ -0.82
PTCH1-221ENST00000550914 TPSG1Q9NRR2 321 aa9.94□□□□□ -0.82
PTCH1-221ENST00000550914 FOXA2Q9Y261 457 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-221ENST00000550914 SOX15O60248 233 aa9.93□□□□□ -0.82
PTCH1-221ENST00000550914 OR8U9P0C7N5 309 aa9.93□□□□□ -0.82
PTCH1-221ENST00000550914 FRMD6-AS1P0C7T7 363 aa9.93□□□□□ -0.82
PTCH1-221ENST00000550914 UBBP0CG47 229 aa9.93□□□□□ -0.82
PTCH1-221ENST00000550914 GP9P14770 177 aa9.93□□□□□ -0.82
PTCH1-221ENST00000550914 SPNP16150 400 aa9.93□□□□□ -0.82
PTCH1-221ENST00000550914 MAPK3P27361 379 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-221ENST00000550914 OR3A3P47888 321 aa9.93□□□□□ -0.82
PTCH1-221ENST00000550914 NDPQ00604 133 aa9.93□□□□□ -0.82
PTCH1-221ENST00000550914 GABPB1Q06547 395 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-221ENST00000550914 TMEM267Q0VDI3 215 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-221ENST00000550914 HMGN3Q15651 99 aa9.93□□□□□ -0.82
PTCH1-221ENST00000550914 CD200R1LQ6Q8B3 271 aa9.93□□□□□ -0.82
PTCH1-221ENST00000550914 PIPOXQ9P0Z9 390 aa9.93□□□□□ -0.82
PTCH1-221ENST00000550914 ABRACLQ9P1F3 81 aa9.93□□□□□ -0.82
PTCH1-221ENST00000550914 RNF150Q9ULK6 438 aa9.93□□□□□ -0.82
PTCH1-221ENST00000550914 A0A1W2PN81 502 aa9.92□□□□□ -0.82
PTCH1-221ENST00000550914 A0A1W2PPK0 400 aa9.92□□□□□ -0.82
PTCH1-221ENST00000550914 OR5H14A6NHG9 310 aa9.92□□□□□ -0.82
PTCH1-221ENST00000550914 RRHO14718 337 aa9.92□□□□□ -0.82
PTCH1-221ENST00000550914 RAB29O14966 203 aa9.92□□□□□ -0.82
PTCH1-221ENST00000550914 RBBP9O75884 186 aa9.92□□□□□ -0.82
PTCH1-221ENST00000550914 LYL1P12980 280 aa9.92□□□□□ -0.82
PTCH1-221ENST00000550914 MC5RP33032 325 aa9.92□□□□□ -0.82
PTCH1-221ENST00000550914 CHRNA7P36544 502 aa9.92□□□□□ -0.82
PTCH1-221ENST00000550914 SLURP1P55000 103 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms