RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 TRAV41A0A0B4J266 112 aa16.83■□□□□ 0.28
SMARCC2-210ENST00000550519 YPEL1O60688 119 aa16.83■□□□□ 0.28
SMARCC2-210ENST00000550519 CRTAPO75718 401 aaPredicted RBP16.83■□□□□ 0.28
SMARCC2-210ENST00000550519 MAS1P04201 325 aa16.83■□□□□ 0.28
SMARCC2-210ENST00000550519 PPP1CCP36873 323 aaKnown RBP16.83■□□□□ 0.28
SMARCC2-210ENST00000550519 RAB9AP51151 201 aa16.83■□□□□ 0.28
SMARCC2-210ENST00000550519 C5orf64Q2M2E5 130 aa16.83■□□□□ 0.28
SMARCC2-210ENST00000550519 MINDY2Q8NBR6 621 aa16.83■□□□□ 0.28
SMARCC2-210ENST00000550519 NPBQ8NG41 125 aa16.83■□□□□ 0.28
SMARCC2-210ENST00000550519 YPEL2Q96QA6 119 aa16.83■□□□□ 0.28
SMARCC2-210ENST00000550519 OR5B12Q96R08 314 aa16.83■□□□□ 0.28
SMARCC2-210ENST00000550519 PARP11Q9NR21 331 aa16.83■□□□□ 0.28
SMARCC2-210ENST00000550519 CHCHD3Q9NX63 227 aaKnown RBP16.83■□□□□ 0.28
SMARCC2-210ENST00000550519 SORL1Q92673 2214 aa16.82■□□□□ 0.28
SMARCC2-210ENST00000550519 NBR2O15453 112 aa16.82■□□□□ 0.28
SMARCC2-210ENST00000550519 PDCD6O75340 191 aa16.82■□□□□ 0.28
SMARCC2-210ENST00000550519 LY86O95711 162 aa16.82■□□□□ 0.28
SMARCC2-210ENST00000550519 CAPGP40121 348 aa16.82■□□□□ 0.28
SMARCC2-210ENST00000550519 MED21Q13503 144 aa16.82■□□□□ 0.28
SMARCC2-210ENST00000550519 C6orf141Q5SZD1 244 aa16.82■□□□□ 0.28
SMARCC2-210ENST00000550519 LIN54Q6MZP7 749 aa16.82■□□□□ 0.28
SMARCC2-210ENST00000550519 ZNF833PQ6ZTB9 187 aa16.82■□□□□ 0.28
SMARCC2-210ENST00000550519 ZNF429Q86V71 674 aa16.82■□□□□ 0.28
SMARCC2-210ENST00000550519 DCUN1D4Q92564 292 aa16.82■□□□□ 0.28
SMARCC2-210ENST00000550519 DERL3Q96Q80 235 aa16.82■□□□□ 0.28
SMARCC2-210ENST00000550519 NDUFA3O95167 84 aa16.81■□□□□ 0.28
SMARCC2-210ENST00000550519 BLVRBP30043 206 aaPredicted RBP16.81■□□□□ 0.28
SMARCC2-210ENST00000550519 DOC2BQ14184 412 aa16.81■□□□□ 0.28
SMARCC2-210ENST00000550519 C19orf54Q5BKX5 351 aa16.81■□□□□ 0.28
SMARCC2-210ENST00000550519 UQCC2Q9BRT2 126 aa16.81■□□□□ 0.28
SMARCC2-210ENST00000550519 HUWE1Q7Z6Z7 4374 aaKnown RBP16.81■□□□□ 0.28
SMARCC2-210ENST00000550519 OVOL1O14753 267 aa16.8■□□□□ 0.28
SMARCC2-210ENST00000550519 RGS11O94810 467 aa16.8■□□□□ 0.28
SMARCC2-210ENST00000550519 OR3A3P47888 321 aa16.8■□□□□ 0.28
SMARCC2-210ENST00000550519 TAS2R43P59537 309 aa16.8■□□□□ 0.28
SMARCC2-210ENST00000550519 FAM27D1Q5T7N8 215 aa16.8■□□□□ 0.28
SMARCC2-210ENST00000550519 NKAIN3Q8N8D7 197 aa16.8■□□□□ 0.28
SMARCC2-210ENST00000550519 GGHQ92820 318 aa16.8■□□□□ 0.28
SMARCC2-210ENST00000550519 GALMQ96C23 342 aa16.8■□□□□ 0.28
SMARCC2-210ENST00000550519 ISYNA1Q9NPH2 558 aa16.8■□□□□ 0.28
SMARCC2-210ENST00000550519 GHRLQ9UBU3 117 aa16.8■□□□□ 0.28
SMARCC2-210ENST00000550519 LRRC42Q9Y546 428 aa16.8■□□□□ 0.28
SMARCC2-210ENST00000550519 SAA2-SAA4A0A096LPE2 208 aa16.79■□□□□ 0.28
SMARCC2-210ENST00000550519 PNMA8CA0A1B0GUJ8 204 aa16.79■□□□□ 0.28
SMARCC2-210ENST00000550519 SOX15O60248 233 aa16.79■□□□□ 0.28
SMARCC2-210ENST00000550519 CD1AP06126 327 aa16.79■□□□□ 0.28
SMARCC2-210ENST00000550519 SAA2P0DJI9 122 aaPredicted RBP16.79■□□□□ 0.28
SMARCC2-210ENST00000550519 CRIP2P52943 208 aaPredicted RBP16.79■□□□□ 0.28
SMARCC2-210ENST00000550519 NDPQ00604 133 aa16.79■□□□□ 0.28
SMARCC2-210ENST00000550519 ST3GAL4Q11206 333 aa16.79■□□□□ 0.28
SMARCC2-210ENST00000550519 SBSPONQ8IVN8 264 aa16.79■□□□□ 0.28
SMARCC2-210ENST00000550519 DLX4Q92988 240 aaPredicted RBP16.79■□□□□ 0.28
SMARCC2-210ENST00000550519 FAM46BQ96A09 425 aa16.79■□□□□ 0.28
SMARCC2-210ENST00000550519 KIAA1456Q9P272 454 aa16.79■□□□□ 0.28
SMARCC2-210ENST00000550519 FBXO7Q9Y3I1 522 aa16.79■□□□□ 0.28
SMARCC2-210ENST00000550519 BAG2O95816 211 aa16.78■□□□□ 0.28
SMARCC2-210ENST00000550519 HMGN3Q15651 99 aa16.78■□□□□ 0.28
SMARCC2-210ENST00000550519 LRRC36Q1X8D7 754 aa16.78■□□□□ 0.28
SMARCC2-210ENST00000550519 TTC23Q5W5X9 447 aa16.78■□□□□ 0.28
SMARCC2-210ENST00000550519 FAM71F2Q6NXP2 309 aa16.78■□□□□ 0.28
SMARCC2-210ENST00000550519 OR2AK2Q8NG84 335 aa16.78■□□□□ 0.28
SMARCC2-210ENST00000550519 SULT4A1Q9BR01 284 aa16.78■□□□□ 0.28
SMARCC2-210ENST00000550519 TOLLIPQ9H0E2 274 aa16.78■□□□□ 0.28
SMARCC2-210ENST00000550519 CST11Q9H112 138 aa16.78■□□□□ 0.28
SMARCC2-210ENST00000550519 ALX4Q9H161 411 aaPredicted RBP16.78■□□□□ 0.28
SMARCC2-210ENST00000550519 IFI27L2Q9H2X8 130 aa16.78■□□□□ 0.28
SMARCC2-210ENST00000550519 TPSG1Q9NRR2 321 aa16.78■□□□□ 0.28
SMARCC2-210ENST00000550519 ERGIC3Q9Y282 383 aa16.78■□□□□ 0.28
SMARCC2-210ENST00000550519 EFCAB10A6NFE3 127 aa16.77■□□□□ 0.28
SMARCC2-210ENST00000550519 CELP19835 753 aa16.77■□□□□ 0.28
SMARCC2-210ENST00000550519 ZNF660Q6AZW8 331 aaPredicted RBP16.77■□□□□ 0.28
SMARCC2-210ENST00000550519 SETD9Q8NE22 299 aa16.77■□□□□ 0.28
SMARCC2-210ENST00000550519 MUC7Q8TAX7 377 aa16.77■□□□□ 0.28
SMARCC2-210ENST00000550519 CYGBQ8WWM9 190 aa16.77■□□□□ 0.28
SMARCC2-210ENST00000550519 RCHY1Q96PM5 261 aa16.77■□□□□ 0.28
SMARCC2-210ENST00000550519 A0A1W2PN81 502 aa16.76■□□□□ 0.27
SMARCC2-210ENST00000550519 LINC01619G3V211 115 aa16.76■□□□□ 0.27
SMARCC2-210ENST00000550519 SAP30O75446 220 aa16.76■□□□□ 0.27
SMARCC2-210ENST00000550519 CHRNA7P36544 502 aa16.76■□□□□ 0.27
SMARCC2-210ENST00000550519 SLURP1P55000 103 aa16.76■□□□□ 0.27
SMARCC2-210ENST00000550519 CX3CL1P78423 397 aa16.76■□□□□ 0.27
SMARCC2-210ENST00000550519 ECSCRQ19T08 205 aa16.76■□□□□ 0.27
SMARCC2-210ENST00000550519 CASC10Q5T4H9 136 aa16.76■□□□□ 0.27
SMARCC2-210ENST00000550519 FAM131AQ6UXB0 335 aa16.76■□□□□ 0.27
SMARCC2-210ENST00000550519 THRSPQ92748 146 aa16.76■□□□□ 0.27
SMARCC2-210ENST00000550519 NEDD4LQ96PU5 975 aa16.76■□□□□ 0.27
SMARCC2-210ENST00000550519 PIPOXQ9P0Z9 390 aa16.76■□□□□ 0.27
SMARCC2-210ENST00000550519 FOXA2Q9Y261 457 aaPredicted RBP16.76■□□□□ 0.27
SMARCC2-210ENST00000550519 NUBP2Q9Y5Y2 271 aa16.76■□□□□ 0.27
SMARCC2-210ENST00000550519 RRHO14718 337 aa16.75■□□□□ 0.27
SMARCC2-210ENST00000550519 LGALS1P09382 135 aaKnown RBP16.75■□□□□ 0.27
SMARCC2-210ENST00000550519 UBBP0CG47 229 aa16.75■□□□□ 0.27
SMARCC2-210ENST00000550519 EGR2P11161 476 aaPredicted RBP16.75■□□□□ 0.27
SMARCC2-210ENST00000550519 SPNP16150 400 aa16.75■□□□□ 0.27
SMARCC2-210ENST00000550519 MAPK3P27361 379 aaPredicted RBP16.75■□□□□ 0.27
SMARCC2-210ENST00000550519 TCTEX1D1Q8N7M0 179 aa16.75■□□□□ 0.27
SMARCC2-210ENST00000550519 FAAP24Q9BTP7 215 aa16.75■□□□□ 0.27
SMARCC2-210ENST00000550519 FBXL15Q9H469 300 aa16.75■□□□□ 0.27
SMARCC2-210ENST00000550519 CNOT2Q9NZN8 540 aaKnown RBP16.75■□□□□ 0.27
SMARCC2-210ENST00000550519 ABRACLQ9P1F3 81 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms