RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 PHF21AQ96BD5 680 aa10.32□□□□□ -0.76
TNFRSF1A-215ENST00000543359 NEDD4LQ96PU5 975 aa10.32□□□□□ -0.76
TNFRSF1A-215ENST00000543359 ABHD14AQ9BUJ0 271 aa10.32□□□□□ -0.76
TNFRSF1A-215ENST00000543359 KCNIP1Q9NZI2 227 aa10.32□□□□□ -0.76
TNFRSF1A-215ENST00000543359 NCBP2LA6PVI3 153 aaKnown RBP10.31□□□□□ -0.76
TNFRSF1A-215ENST00000543359 PF4V1P10720 104 aa10.31□□□□□ -0.76
TNFRSF1A-215ENST00000543359 PSMA1P25786 263 aaKnown RBP10.31□□□□□ -0.76
TNFRSF1A-215ENST00000543359 BLVRBP30043 206 aaPredicted RBP10.31□□□□□ -0.76
TNFRSF1A-215ENST00000543359 OR3A3P47888 321 aa10.31□□□□□ -0.76
TNFRSF1A-215ENST00000543359 RPL23AP62750 156 aaKnown RBP10.31□□□□□ -0.76
TNFRSF1A-215ENST00000543359 CFHR3Q02985 330 aa10.31□□□□□ -0.76
TNFRSF1A-215ENST00000543359 PLA2G7Q13093 441 aa10.31□□□□□ -0.76
TNFRSF1A-215ENST00000543359 TBCEQ15813 527 aaPredicted RBP10.31□□□□□ -0.76
TNFRSF1A-215ENST00000543359 ZNF833PQ6ZTB9 187 aa10.31□□□□□ -0.76
TNFRSF1A-215ENST00000543359 LINC00482Q8N8I6 264 aa10.31□□□□□ -0.76
TNFRSF1A-215ENST00000543359 OR8H1Q8NGG4 311 aa10.31□□□□□ -0.76
TNFRSF1A-215ENST00000543359 HSPB9Q9BQS6 159 aa10.31□□□□□ -0.76
TNFRSF1A-215ENST00000543359 ZNF251Q9BRH9 671 aa10.31□□□□□ -0.76
TNFRSF1A-215ENST00000543359 CCDC90BQ9GZT6 254 aa10.31□□□□□ -0.76
TNFRSF1A-215ENST00000543359 IFI27L2Q9H2X8 130 aa10.31□□□□□ -0.76
TNFRSF1A-215ENST00000543359 HSF4Q9ULV5 492 aa10.31□□□□□ -0.76
TNFRSF1A-215ENST00000543359 LRRC42Q9Y546 428 aa10.31□□□□□ -0.76
TNFRSF1A-215ENST00000543359 SHISA3A0PJX4 238 aa10.3□□□□□ -0.76
TNFRSF1A-215ENST00000543359 ERICH4A6NGS2 130 aa10.3□□□□□ -0.76
TNFRSF1A-215ENST00000543359 ARL6IP5O75915 188 aa10.3□□□□□ -0.76
TNFRSF1A-215ENST00000543359 ARSBP15848 533 aa10.3□□□□□ -0.76
TNFRSF1A-215ENST00000543359 CALRP27797 417 aaKnown RBP10.3□□□□□ -0.76
TNFRSF1A-215ENST00000543359 HSPA13P48723 471 aa10.3□□□□□ -0.76
TNFRSF1A-215ENST00000543359 CLDN12P56749 244 aa10.3□□□□□ -0.76
TNFRSF1A-215ENST00000543359 C2orf76Q3KRA6 126 aa10.3□□□□□ -0.76
TNFRSF1A-215ENST00000543359 PLAC9Q5JTB6 97 aa10.3□□□□□ -0.76
TNFRSF1A-215ENST00000543359 FOXB2Q5VYV0 432 aa10.3□□□□□ -0.76
TNFRSF1A-215ENST00000543359 RNF152Q8N8N0 203 aa10.3□□□□□ -0.76
TNFRSF1A-215ENST00000543359 OR51D1Q8NGF3 324 aa10.3□□□□□ -0.76
TNFRSF1A-215ENST00000543359 GALMQ96C23 342 aa10.3□□□□□ -0.76
TNFRSF1A-215ENST00000543359 CNBD2Q96M20 576 aa10.3□□□□□ -0.76
TNFRSF1A-215ENST00000543359 NABP2Q9BQ15 211 aa10.3□□□□□ -0.76
TNFRSF1A-215ENST00000543359 AGMATQ9BSE5 352 aa10.3□□□□□ -0.76
TNFRSF1A-215ENST00000543359 HDHD3Q9BSH5 251 aaPredicted RBP10.3□□□□□ -0.76
TNFRSF1A-215ENST00000543359 MRPL20Q9BYC9 149 aaKnown RBP10.3□□□□□ -0.76
TNFRSF1A-215ENST00000543359 PARP12Q9H0J9 701 aaKnown RBP10.3□□□□□ -0.76
TNFRSF1A-215ENST00000543359 VCX3BQ9H321 246 aa10.3□□□□□ -0.76
TNFRSF1A-215ENST00000543359 ACOT13Q9NPJ3 140 aa10.3□□□□□ -0.76
TNFRSF1A-215ENST00000543359 NECAP2Q9NVZ3 263 aa10.3□□□□□ -0.76
TNFRSF1A-215ENST00000543359 PLEKHJ1Q9NW61 149 aa10.3□□□□□ -0.76
TNFRSF1A-215ENST00000543359 AK3Q9UIJ7 227 aa10.3□□□□□ -0.76
TNFRSF1A-215ENST00000543359 RAB26Q9ULW5 256 aa10.3□□□□□ -0.76
TNFRSF1A-215ENST00000543359 SAA2-SAA4A0A096LPE2 208 aa10.29□□□□□ -0.76
TNFRSF1A-215ENST00000543359 AP4M1O00189 453 aa10.29□□□□□ -0.76
TNFRSF1A-215ENST00000543359 SAA2P0DJI9 122 aaPredicted RBP10.29□□□□□ -0.76
TNFRSF1A-215ENST00000543359 CD33P20138 364 aa10.29□□□□□ -0.76
TNFRSF1A-215ENST00000543359 THBS3P49746 956 aa10.29□□□□□ -0.76
TNFRSF1A-215ENST00000543359 RAB11BQ15907 218 aa10.29□□□□□ -0.76
TNFRSF1A-215ENST00000543359 CD200R1LQ6Q8B3 271 aa10.29□□□□□ -0.76
TNFRSF1A-215ENST00000543359 ZNF367Q7RTV3 350 aa10.29□□□□□ -0.76
TNFRSF1A-215ENST00000543359 REC114Q7Z4M0 266 aa10.29□□□□□ -0.76
TNFRSF1A-215ENST00000543359 FOXRED2Q8IWF2 684 aa10.29□□□□□ -0.76
TNFRSF1A-215ENST00000543359 MRPL41Q8IXM3 137 aaKnown RBP10.29□□□□□ -0.76
TNFRSF1A-215ENST00000543359 COMMD1Q8N668 190 aa10.29□□□□□ -0.76
TNFRSF1A-215ENST00000543359 FAM3DQ96BQ1 224 aa10.29□□□□□ -0.76
TNFRSF1A-215ENST00000543359 ARHGAP5-AS1Q96IT6 56 aa10.29□□□□□ -0.76
TNFRSF1A-215ENST00000543359 RIMS4Q9H426 269 aaPredicted RBP10.29□□□□□ -0.76
TNFRSF1A-215ENST00000543359 PLGRKTQ9HBL7 147 aa10.29□□□□□ -0.76
TNFRSF1A-215ENST00000543359 ZFP57Q9NU63 452 aa10.29□□□□□ -0.76
TNFRSF1A-215ENST00000543359 AURKAIP1Q9NWT8 199 aaPredicted RBP10.29□□□□□ -0.76
TNFRSF1A-215ENST00000543359 ZNF580Q9UK33 172 aa10.29□□□□□ -0.76
TNFRSF1A-215ENST00000543359 TRAV1-2A0A0B4J238 106 aa10.28□□□□□ -0.76
TNFRSF1A-215ENST00000543359 TMEM272A0A1B0GTI8 110 aa10.28□□□□□ -0.76
TNFRSF1A-215ENST00000543359 ITGB1BP1O14713 200 aa10.28□□□□□ -0.76
TNFRSF1A-215ENST00000543359 RGS11O94810 467 aa10.28□□□□□ -0.76
TNFRSF1A-215ENST00000543359 IGF1P05019 195 aa10.28□□□□□ -0.76
TNFRSF1A-215ENST00000543359 CNTFRP26992 372 aa10.28□□□□□ -0.76
TNFRSF1A-215ENST00000543359 VEGFCP49767 419 aa10.28□□□□□ -0.76
TNFRSF1A-215ENST00000543359 KRTAP10-11P60412 298 aa10.28□□□□□ -0.76
TNFRSF1A-215ENST00000543359 SLC35B1P78383 322 aa10.28□□□□□ -0.76
TNFRSF1A-215ENST00000543359 PNLIPRP3Q17RR3 467 aa10.28□□□□□ -0.76
TNFRSF1A-215ENST00000543359 TEX38Q6PEX7 206 aa10.28□□□□□ -0.76
TNFRSF1A-215ENST00000543359 LCNL1Q6ZST4 164 aa10.28□□□□□ -0.76
TNFRSF1A-215ENST00000543359 C8orf86Q6ZUL3 223 aa10.28□□□□□ -0.76
TNFRSF1A-215ENST00000543359 OR2AK2Q8NG84 335 aa10.28□□□□□ -0.76
TNFRSF1A-215ENST00000543359 P2RX4Q99571 388 aa10.28□□□□□ -0.76
TNFRSF1A-215ENST00000543359 RASL11BQ9BPW5 248 aa10.28□□□□□ -0.76
TNFRSF1A-215ENST00000543359 URM1Q9BTM9 101 aaKnown RBP10.28□□□□□ -0.76
TNFRSF1A-215ENST00000543359 PECRQ9BY49 303 aa10.28□□□□□ -0.76
TNFRSF1A-215ENST00000543359 NDUFB11Q9NX14 153 aa10.28□□□□□ -0.76
TNFRSF1A-215ENST00000543359 SLC23A1Q9UHI7 598 aa10.28□□□□□ -0.76
TNFRSF1A-215ENST00000543359 KCNK7Q9Y2U2 307 aa10.28□□□□□ -0.76
TNFRSF1A-215ENST00000543359 V9GY05 133 aa10.28□□□□□ -0.76
TNFRSF1A-215ENST00000543359 TENM3Q9P273 2699 aa10.27□□□□□ -0.77
TNFRSF1A-215ENST00000543359 IGKV1-6A0A0C4DH72 117 aa10.27□□□□□ -0.77
TNFRSF1A-215ENST00000543359 TRDV1A0A1B0GX56 115 aa10.27□□□□□ -0.77
TNFRSF1A-215ENST00000543359 ST8SIA5O15466 376 aa10.27□□□□□ -0.77
TNFRSF1A-215ENST00000543359 PROP1O75360 226 aa10.27□□□□□ -0.77
TNFRSF1A-215ENST00000543359 ATP6V1G2O95670 118 aa10.27□□□□□ -0.77
TNFRSF1A-215ENST00000543359 PF4P02776 101 aa10.27□□□□□ -0.77
TNFRSF1A-215ENST00000543359 RPLP1P05386 114 aaKnown RBP10.27□□□□□ -0.77
TNFRSF1A-215ENST00000543359 CT45A6P0DMU7 189 aa10.27□□□□□ -0.77
TNFRSF1A-215ENST00000543359 CT45A5P0DMU8 189 aa10.27□□□□□ -0.77
TNFRSF1A-215ENST00000543359 CT45A7P0DMV0 189 aa10.27□□□□□ -0.77
TNFRSF1A-215ENST00000543359 SLC6A1P30531 599 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms