RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 CD177Q8N6Q3 437 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 NEUROG1Q92886 237 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 LIME1Q9H400 295 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 DYNLRB1Q9NP97 96 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 TRAPPC2LQ9UL33 140 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 ICE1Q9Y2F5 2266 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 IGKV1D-17A0A075B6S4 117 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 CYSRT1A8MQ03 144 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 NPIPB11E5RHQ5 1161 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 ZNF737O75373 536 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 DUS4LO95620 317 aaKnown RBP14.14□□□□□ -0.15
COPS3-212ENST00000539941 ZNF728P0DKX0 622 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 CCL8P80075 99 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 SRSF4Q08170 494 aaKnown RBP14.14□□□□□ -0.15
COPS3-212ENST00000539941 MST1LQ2TV78 715 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 FAM74A1Q5RGS3 127 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 ZNF546Q86UE3 836 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 BOLLQ8N9W6 283 aaKnown RBP14.14□□□□□ -0.15
COPS3-212ENST00000539941 MITD1Q8WV92 249 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 TMEM230Q96A57 120 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 SNX22Q96L94 193 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 PHB2Q99623 299 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 TMPRSS5Q9H3S3 457 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 SAP30LQ9HAJ7 183 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 DOPEY2Q9Y3R5 2298 aa14.13□□□□□ -0.15
COPS3-212ENST00000539941 MEX3AA1L020 520 aaKnown RBP14.13□□□□□ -0.15
COPS3-212ENST00000539941 FGF16O43320 207 aa14.13□□□□□ -0.15
COPS3-212ENST00000539941 TUSC2O75896 110 aa14.13□□□□□ -0.15
COPS3-212ENST00000539941 PLAUP00749 431 aa14.13□□□□□ -0.15
COPS3-212ENST00000539941 PPYP01298 95 aa14.13□□□□□ -0.15
COPS3-212ENST00000539941 CD8AP01732 235 aa14.13□□□□□ -0.15
COPS3-212ENST00000539941 MUC1P15941 1255 aaPredicted RBP14.13□□□□□ -0.15
COPS3-212ENST00000539941 RCC1P18754 421 aaPredicted RBP14.13□□□□□ -0.15
COPS3-212ENST00000539941 CD34P28906 385 aa14.13□□□□□ -0.15
COPS3-212ENST00000539941 SNRPEP62304 92 aaKnown RBP14.13□□□□□ -0.15
COPS3-212ENST00000539941 HERPUD1Q15011 391 aa14.13□□□□□ -0.15
COPS3-212ENST00000539941 CBLN2Q8IUK8 224 aa14.13□□□□□ -0.15
COPS3-212ENST00000539941 PIK3IP1Q96FE7 263 aa14.13□□□□□ -0.15
COPS3-212ENST00000539941 TRBV6-7A0A0A0MS04 114 aa14.12□□□□□ -0.15
COPS3-212ENST00000539941 A0A0B4J2A0 478 aa14.12□□□□□ -0.15
COPS3-212ENST00000539941 GOSR2O14653 212 aa14.12□□□□□ -0.15
COPS3-212ENST00000539941 AADACP22760 399 aa14.12□□□□□ -0.15
COPS3-212ENST00000539941 VAMP1P23763 118 aa14.12□□□□□ -0.15
COPS3-212ENST00000539941 HOXA4Q00056 320 aaPredicted RBP14.12□□□□□ -0.15
COPS3-212ENST00000539941 DEFA6Q01524 100 aa14.12□□□□□ -0.15
COPS3-212ENST00000539941 HMGN3Q15651 99 aa14.12□□□□□ -0.15
COPS3-212ENST00000539941 DNLZQ5SXM8 178 aa14.12□□□□□ -0.15
COPS3-212ENST00000539941 TEX36Q5VZQ5 186 aa14.12□□□□□ -0.15
COPS3-212ENST00000539941 C11orf88Q6PI97 169 aa14.12□□□□□ -0.15
COPS3-212ENST00000539941 C1orf87Q8N0U7 546 aa14.12□□□□□ -0.15
COPS3-212ENST00000539941 RBM14Q96PK6 669 aaKnown RBP14.12□□□□□ -0.15
COPS3-212ENST00000539941 KCNIP1Q9NZI2 227 aa14.12□□□□□ -0.15
COPS3-212ENST00000539941 SHPKQ9UHJ6 478 aa14.12□□□□□ -0.15
COPS3-212ENST00000539941 UTP20O75691 2785 aaKnown RBP14.12□□□□□ -0.15
COPS3-212ENST00000539941 IGKV1-6A0A0C4DH72 117 aa14.11□□□□□ -0.15
COPS3-212ENST00000539941 DBX1A6NMT0 343 aa14.11□□□□□ -0.15
COPS3-212ENST00000539941 SFT2D2O95562 160 aa14.11□□□□□ -0.15
COPS3-212ENST00000539941 CD80P33681 288 aa14.11□□□□□ -0.15
COPS3-212ENST00000539941 H2BFSP57053 126 aa14.11□□□□□ -0.15
COPS3-212ENST00000539941 HABP2Q14520 560 aaPredicted RBP14.11□□□□□ -0.15
COPS3-212ENST00000539941 STUMQ69YW2 141 aa14.11□□□□□ -0.15
COPS3-212ENST00000539941 TRAT1Q6PIZ9 186 aa14.11□□□□□ -0.15
COPS3-212ENST00000539941 MUC15Q8N387 334 aa14.11□□□□□ -0.15
COPS3-212ENST00000539941 OR10J5Q8NHC4 309 aa14.11□□□□□ -0.15
COPS3-212ENST00000539941 SDSLQ96GA7 329 aa14.11□□□□□ -0.15
COPS3-212ENST00000539941 COQ2Q96H96 371 aa14.11□□□□□ -0.15
COPS3-212ENST00000539941 NCOR1P1Q9H4R4 102 aa14.11□□□□□ -0.15
COPS3-212ENST00000539941 MMP26Q9NRE1 261 aa14.11□□□□□ -0.15
COPS3-212ENST00000539941 METRNQ9UJH8 293 aa14.11□□□□□ -0.15
COPS3-212ENST00000539941 USP9YO00507 2555 aaPredicted RBP14.11□□□□□ -0.15
COPS3-212ENST00000539941 DYSFO75923 2080 aa14.11□□□□□ -0.15
COPS3-212ENST00000539941 CACNA1DQ01668 2161 aa14.11□□□□□ -0.15
COPS3-212ENST00000539941 OOEPA6NGQ2 149 aa14.1□□□□□ -0.15
COPS3-212ENST00000539941 MGST3O14880 152 aa14.1□□□□□ -0.15
COPS3-212ENST00000539941 CYB5R3P00387 301 aaPredicted RBP14.1□□□□□ -0.15
COPS3-212ENST00000539941 HLA-GP17693 338 aa14.1□□□□□ -0.15
COPS3-212ENST00000539941 PI3P19957 117 aa14.1□□□□□ -0.15
COPS3-212ENST00000539941 GABRA2P47869 451 aa14.1□□□□□ -0.15
COPS3-212ENST00000539941 RELQ04864 619 aaPredicted RBP14.1□□□□□ -0.15
COPS3-212ENST00000539941 LBHQ53QV2 105 aaPredicted RBP14.1□□□□□ -0.15
COPS3-212ENST00000539941 KRBOX4Q5JUW0 171 aa14.1□□□□□ -0.15
COPS3-212ENST00000539941 RNASE11Q8TAA1 199 aaKnown RBP14.1□□□□□ -0.15
COPS3-212ENST00000539941 C2CD4CQ8TF44 421 aa14.1□□□□□ -0.15
COPS3-212ENST00000539941 TOMM40LQ969M1 308 aa14.1□□□□□ -0.15
COPS3-212ENST00000539941 RSRP1Q9BUV0 290 aa14.1□□□□□ -0.15
COPS3-212ENST00000539941 COMMD9Q9P000 198 aa14.1□□□□□ -0.15
COPS3-212ENST00000539941 IGHV3OR15-7A0A075B7D8 119 aa14.1□□□□□ -0.15
COPS3-212ENST00000539941 K7N7A8 449 aa14.1□□□□□ -0.15
COPS3-212ENST00000539941 RPS2P15880 293 aaKnown RBP14.1□□□□□ -0.15
COPS3-212ENST00000539941 FXYD4P59646 89 aa14.1□□□□□ -0.15
COPS3-212ENST00000539941 CD81P60033 236 aa14.1□□□□□ -0.15
COPS3-212ENST00000539941 RAB2AP61019 212 aa14.1□□□□□ -0.15
COPS3-212ENST00000539941 AESQ08117 197 aa14.1□□□□□ -0.15
COPS3-212ENST00000539941 ABCA11PQ4W5N1 156 aa14.1□□□□□ -0.15
COPS3-212ENST00000539941 ACOT7LQ6ZUV0 252 aa14.1□□□□□ -0.15
COPS3-212ENST00000539941 SGPP2Q8IWX5 399 aa14.1□□□□□ -0.15
COPS3-212ENST00000539941 H1FOOQ8IZA3 346 aaPredicted RBP14.1□□□□□ -0.15
COPS3-212ENST00000539941 FAM185AQ8N0U4 392 aa14.1□□□□□ -0.15
COPS3-212ENST00000539941 OR5D13Q8NGL4 314 aa14.1□□□□□ -0.15
COPS3-212ENST00000539941 KIRREL1Q96J84 757 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms