RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 OR56B4Q8NH76 319 aa12.62□□□□□ -0.39
RPAIN-206ENST00000539417 YPEL2Q96QA6 119 aa12.62□□□□□ -0.39
RPAIN-206ENST00000539417 SLC23A1Q9UHI7 598 aa12.62□□□□□ -0.39
RPAIN-206ENST00000539417 SMIM31A0A1B0GVY4 71 aa12.61□□□□□ -0.39
RPAIN-206ENST00000539417 ST8SIA5O15466 376 aa12.61□□□□□ -0.39
RPAIN-206ENST00000539417 NDUFA7O95182 113 aa12.61□□□□□ -0.39
RPAIN-206ENST00000539417 EIF4EP06730 217 aaKnown RBP12.61□□□□□ -0.39
RPAIN-206ENST00000539417 OR3A3P47888 321 aa12.61□□□□□ -0.39
RPAIN-206ENST00000539417 SRSF4Q08170 494 aaKnown RBP12.61□□□□□ -0.39
RPAIN-206ENST00000539417 Q3ZCU0 254 aa12.61□□□□□ -0.39
RPAIN-206ENST00000539417 C12orf54Q6X4T0 127 aa12.61□□□□□ -0.39
RPAIN-206ENST00000539417 CROCCP3Q8IVE0 287 aa12.61□□□□□ -0.39
RPAIN-206ENST00000539417 LYG1Q8N1E2 194 aa12.61□□□□□ -0.39
RPAIN-206ENST00000539417 RTN4IP1Q8WWV3 396 aaPredicted RBP12.61□□□□□ -0.39
RPAIN-206ENST00000539417 CREB3L1Q96BA8 519 aa12.61□□□□□ -0.39
RPAIN-206ENST00000539417 ABHD14AQ9BUJ0 271 aa12.61□□□□□ -0.39
RPAIN-206ENST00000539417 ABCG5Q9H222 651 aa12.61□□□□□ -0.39
RPAIN-206ENST00000539417 IFI27L2Q9H2X8 130 aa12.61□□□□□ -0.39
RPAIN-206ENST00000539417 RAB9BQ9NP90 201 aa12.61□□□□□ -0.39
RPAIN-206ENST00000539417 COMMD3Q9UBI1 195 aa12.61□□□□□ -0.39
RPAIN-206ENST00000539417 IGHV1-3A0A0C4DH29 117 aa12.6□□□□□ -0.39
RPAIN-206ENST00000539417 FAM90A9PA6NNJ1 464 aa12.6□□□□□ -0.39
RPAIN-206ENST00000539417 OOSP1A8MZH6 123 aa12.6□□□□□ -0.39
RPAIN-206ENST00000539417 FABP7O15540 132 aa12.6□□□□□ -0.39
RPAIN-206ENST00000539417 SNRNP70P08621 437 aaKnown RBP12.6□□□□□ -0.39
RPAIN-206ENST00000539417 GSTP1P09211 210 aaKnown RBP12.6□□□□□ -0.39
RPAIN-206ENST00000539417 ZNF137PP52743 207 aa12.6□□□□□ -0.39
RPAIN-206ENST00000539417 KRTAP10-3P60369 221 aa12.6□□□□□ -0.39
RPAIN-206ENST00000539417 ZNF816Q0VGE8 651 aaPredicted RBP12.6□□□□□ -0.39
RPAIN-206ENST00000539417 FOXL1Q12952 345 aa12.6□□□□□ -0.39
RPAIN-206ENST00000539417 HABP2Q14520 560 aaPredicted RBP12.6□□□□□ -0.39
RPAIN-206ENST00000539417 LINC01006Q8NI28 216 aa12.6□□□□□ -0.39
RPAIN-206ENST00000539417 CAPSLQ8WWF8 208 aa12.6□□□□□ -0.39
RPAIN-206ENST00000539417 SH2D7A6NKC9 451 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-206ENST00000539417 FCER2P06734 321 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 CEACAM6P40199 344 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 RPL15P61313 204 aaKnown RBP12.59□□□□□ -0.39
RPAIN-206ENST00000539417 BLCAPP62952 87 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 MRPS15P82914 257 aaKnown RBP12.59□□□□□ -0.39
RPAIN-206ENST00000539417 UBE2NLQ5JXB2 153 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 LY6G6FQ5SQ64 297 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 STEAP3Q658P3 488 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 MOB3BQ86TA1 216 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 ABHD14BQ96IU4 210 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 ST6GALNAC5Q9BVH7 336 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 C11orf54Q9H0W9 315 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-206ENST00000539417 AUNIPQ9H7T9 357 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 SAA2-SAA4A0A096LPE2 208 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 BET1O15155 118 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 HPGDSO60760 199 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 TMEM127O75204 238 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 PROP1O75360 226 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 TSPAN9O75954 239 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 GAPDHP04406 335 aaKnown RBP12.59□□□□□ -0.39
RPAIN-206ENST00000539417 SAA2P0DJI9 122 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-206ENST00000539417 BRS3P32247 399 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 TALDO1P37837 337 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 RAB7AP51149 207 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 RORCP51449 518 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 HNF4GQ14541 408 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 RPL39P5Q59GN2 51 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 CCDC144NLQ6NUI1 221 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 OR8H3Q8N146 312 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 GVQW1Q8N7I0 195 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 OR2AK2Q8NG84 335 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 OR4A4PQ8NGN8 299 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 ZNF251Q9BRH9 671 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 AGMATQ9BSE5 352 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 CABLES2Q9BTV7 478 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 ZNF702PQ9H963 129 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 RNF150Q9ULK6 438 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 MGAT4AQ9UM21 535 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 CEPT1Q9Y6K0 416 aa12.59□□□□□ -0.39
RPAIN-206ENST00000539417 MEIS3P1A6NDR6 274 aa12.58□□□□□ -0.4
RPAIN-206ENST00000539417 POM121CA8CG34 1229 aa12.58□□□□□ -0.4
RPAIN-206ENST00000539417 IGKV1D-33P01593 117 aa12.58□□□□□ -0.4
RPAIN-206ENST00000539417 IGKV1-33P01594 117 aa12.58□□□□□ -0.4
RPAIN-206ENST00000539417 AMY1AP04745 511 aa12.58□□□□□ -0.4
RPAIN-206ENST00000539417 AMY2AP04746 511 aa12.58□□□□□ -0.4
RPAIN-206ENST00000539417 DTYMKP23919 212 aa12.58□□□□□ -0.4
RPAIN-206ENST00000539417 MNDAP41218 407 aa12.58□□□□□ -0.4
RPAIN-206ENST00000539417 GNG2P59768 71 aa12.58□□□□□ -0.4
RPAIN-206ENST00000539417 PNLIPRP3Q17RR3 467 aa12.58□□□□□ -0.4
RPAIN-206ENST00000539417 HIST2H2BDQ6DRA6 164 aa12.58□□□□□ -0.4
RPAIN-206ENST00000539417 OR4F5Q8NH21 305 aa12.58□□□□□ -0.4
RPAIN-206ENST00000539417 KCTD12Q96CX2 325 aaKnown RBP12.58□□□□□ -0.4
RPAIN-206ENST00000539417 SLC25A33Q9BSK2 321 aa12.58□□□□□ -0.4
RPAIN-206ENST00000539417 MRPL20Q9BYC9 149 aaKnown RBP12.58□□□□□ -0.4
RPAIN-206ENST00000539417 C16orf95Q9H693 158 aa12.58□□□□□ -0.4
RPAIN-206ENST00000539417 RDH8Q9NYR8 311 aa12.58□□□□□ -0.4
RPAIN-206ENST00000539417 TRBV6-7A0A0A0MS04 114 aa12.57□□□□□ -0.4
RPAIN-206ENST00000539417 A0A0A6YYH2 397 aa12.57□□□□□ -0.4
RPAIN-206ENST00000539417 CLPSL1A2RUU4 121 aa12.57□□□□□ -0.4
RPAIN-206ENST00000539417 A6NJ64 397 aa12.57□□□□□ -0.4
RPAIN-206ENST00000539417 H3BMQ9 156 aa12.57□□□□□ -0.4
RPAIN-206ENST00000539417 HSPA12AO43301 675 aa12.57□□□□□ -0.4
RPAIN-206ENST00000539417 XRCC3O43542 346 aa12.57□□□□□ -0.4
RPAIN-206ENST00000539417 SCGNO76038 276 aa12.57□□□□□ -0.4
RPAIN-206ENST00000539417 RGS11O94810 467 aa12.57□□□□□ -0.4
RPAIN-206ENST00000539417 ELK1P19419 428 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms