RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 ZNF260Q3ZCT1 412 aa9.74□□□□□ -0.85
VAMP1-206ENST00000538970 ASPHD1Q5U4P2 390 aa9.74□□□□□ -0.85
VAMP1-206ENST00000538970 LAIR2Q6ISS4 152 aa9.74□□□□□ -0.85
VAMP1-206ENST00000538970 ZNF833PQ6ZTB9 187 aa9.74□□□□□ -0.85
VAMP1-206ENST00000538970 FAM46BQ96A09 425 aa9.74□□□□□ -0.85
VAMP1-206ENST00000538970 RITA1Q96K30 269 aa9.74□□□□□ -0.85
VAMP1-206ENST00000538970 NABP2Q9BQ15 211 aa9.74□□□□□ -0.85
VAMP1-206ENST00000538970 UQCC2Q9BRT2 126 aa9.74□□□□□ -0.85
VAMP1-206ENST00000538970 KLK15Q9H2R5 256 aa9.74□□□□□ -0.85
VAMP1-206ENST00000538970 OR51J1Q9H342 316 aa9.74□□□□□ -0.85
VAMP1-206ENST00000538970 GNB4Q9HAV0 340 aa9.74□□□□□ -0.85
VAMP1-206ENST00000538970 GHRLQ9UBU3 117 aa9.74□□□□□ -0.85
VAMP1-206ENST00000538970 U3KQK5 164 aa9.74□□□□□ -0.85
VAMP1-206ENST00000538970 STAB2Q8WWQ8 2551 aa9.73□□□□□ -0.85
VAMP1-206ENST00000538970 SAA2-SAA4A0A096LPE2 208 aa9.73□□□□□ -0.85
VAMP1-206ENST00000538970 IGHV7-81A0A0B4J1V7 117 aa9.73□□□□□ -0.85
VAMP1-206ENST00000538970 G3V318 75 aa9.73□□□□□ -0.85
VAMP1-206ENST00000538970 I3L521 148 aa9.73□□□□□ -0.85
VAMP1-206ENST00000538970 MYL12BO14950 172 aa9.73□□□□□ -0.85
VAMP1-206ENST00000538970 NBR2O15453 112 aa9.73□□□□□ -0.85
VAMP1-206ENST00000538970 YPEL1O60688 119 aa9.73□□□□□ -0.85
VAMP1-206ENST00000538970 OR8U8P0C7N1 319 aa9.73□□□□□ -0.85
VAMP1-206ENST00000538970 SAA2P0DJI9 122 aaPredicted RBP9.73□□□□□ -0.85
VAMP1-206ENST00000538970 CELP19835 753 aa9.73□□□□□ -0.85
VAMP1-206ENST00000538970 MAPK3P27361 379 aaPredicted RBP9.73□□□□□ -0.85
VAMP1-206ENST00000538970 WNT4P56705 351 aa9.73□□□□□ -0.85
VAMP1-206ENST00000538970 RUNX1Q01196 453 aa9.73□□□□□ -0.85
VAMP1-206ENST00000538970 HMGN3Q15651 99 aa9.73□□□□□ -0.85
VAMP1-206ENST00000538970 LY6G6FQ5SQ64 297 aa9.73□□□□□ -0.85
VAMP1-206ENST00000538970 PACRGLQ8N7B6 248 aa9.73□□□□□ -0.85
VAMP1-206ENST00000538970 ZNF491Q8N8L2 437 aa9.73□□□□□ -0.85
VAMP1-206ENST00000538970 THRSPQ92748 146 aa9.73□□□□□ -0.85
VAMP1-206ENST00000538970 YPEL2Q96QA6 119 aa9.73□□□□□ -0.85
VAMP1-206ENST00000538970 ZNF251Q9BRH9 671 aa9.73□□□□□ -0.85
VAMP1-206ENST00000538970 ANKRD60Q9BZ19 345 aa9.73□□□□□ -0.85
VAMP1-206ENST00000538970 CST11Q9H112 138 aa9.73□□□□□ -0.85
VAMP1-206ENST00000538970 IFI27L2Q9H2X8 130 aa9.73□□□□□ -0.85
VAMP1-206ENST00000538970 PARP11Q9NR21 331 aa9.73□□□□□ -0.85
VAMP1-206ENST00000538970 CNOT2Q9NZN8 540 aaKnown RBP9.73□□□□□ -0.85
VAMP1-206ENST00000538970 VSIG4Q9Y279 399 aa9.73□□□□□ -0.85
VAMP1-206ENST00000538970 ZNF256Q9Y2P7 627 aaPredicted RBP9.73□□□□□ -0.85
VAMP1-206ENST00000538970 WSB1Q9Y6I7 421 aa9.73□□□□□ -0.85
VAMP1-206ENST00000538970 TRAV41A0A0B4J266 112 aa9.72□□□□□ -0.85
VAMP1-206ENST00000538970 RGS11O94810 467 aa9.72□□□□□ -0.85
VAMP1-206ENST00000538970 NDUFA3O95167 84 aa9.72□□□□□ -0.85
VAMP1-206ENST00000538970 CHATP28329 748 aa9.72□□□□□ -0.85
VAMP1-206ENST00000538970 BLVRBP30043 206 aaPredicted RBP9.72□□□□□ -0.85
VAMP1-206ENST00000538970 OR3A3P47888 321 aa9.72□□□□□ -0.85
VAMP1-206ENST00000538970 GNB1P62873 340 aa9.72□□□□□ -0.85
VAMP1-206ENST00000538970 ZNF616Q08AN1 781 aa9.72□□□□□ -0.85
VAMP1-206ENST00000538970 C5orf64Q2M2E5 130 aa9.72□□□□□ -0.85
VAMP1-206ENST00000538970 TMEM65Q6PI78 240 aa9.72□□□□□ -0.85
VAMP1-206ENST00000538970 AHSA2Q719I0 299 aa9.72□□□□□ -0.85
VAMP1-206ENST00000538970 DHRSXQ8N5I4 330 aa9.72□□□□□ -0.85
VAMP1-206ENST00000538970 NPBQ8NG41 125 aa9.72□□□□□ -0.85
VAMP1-206ENST00000538970 OR2AK2Q8NG84 335 aa9.72□□□□□ -0.85
VAMP1-206ENST00000538970 OR1N2Q8NGR9 330 aa9.72□□□□□ -0.85
VAMP1-206ENST00000538970 GALMQ96C23 342 aa9.72□□□□□ -0.85
VAMP1-206ENST00000538970 SULT4A1Q9BR01 284 aa9.72□□□□□ -0.85
VAMP1-206ENST00000538970 C8orf4Q9NR00 106 aa9.72□□□□□ -0.85
VAMP1-206ENST00000538970 PSORS1C1Q9UIG5 152 aa9.72□□□□□ -0.85
VAMP1-206ENST00000538970 GNAO1P09471 354 aa9.71□□□□□ -0.86
VAMP1-206ENST00000538970 UBBP0CG47 229 aa9.71□□□□□ -0.86
VAMP1-206ENST00000538970 INSL3P51460 131 aa9.71□□□□□ -0.86
VAMP1-206ENST00000538970 NDPQ00604 133 aa9.71□□□□□ -0.86
VAMP1-206ENST00000538970 INSL4Q14641 139 aa9.71□□□□□ -0.86
VAMP1-206ENST00000538970 C19orf54Q5BKX5 351 aa9.71□□□□□ -0.86
VAMP1-206ENST00000538970 LIN54Q6MZP7 749 aa9.71□□□□□ -0.86
VAMP1-206ENST00000538970 FAM71F2Q6NXP2 309 aa9.71□□□□□ -0.86
VAMP1-206ENST00000538970 C8orf59Q8N0T1 100 aaPredicted RBP9.71□□□□□ -0.86
VAMP1-206ENST00000538970 MINDY2Q8NBR6 621 aa9.71□□□□□ -0.86
VAMP1-206ENST00000538970 FBLIM1Q8WUP2 373 aa9.71□□□□□ -0.86
VAMP1-206ENST00000538970 OR5B12Q96R08 314 aa9.71□□□□□ -0.86
VAMP1-206ENST00000538970 ASCL2Q99929 193 aa9.71□□□□□ -0.86
VAMP1-206ENST00000538970 PLCXD1Q9NUJ7 323 aa9.71□□□□□ -0.86
VAMP1-206ENST00000538970 FBXO7Q9Y3I1 522 aa9.71□□□□□ -0.86
VAMP1-206ENST00000538970 EBAG9O00559 213 aa9.7□□□□□ -0.86
VAMP1-206ENST00000538970 RAB9AP51151 201 aa9.7□□□□□ -0.86
VAMP1-206ENST00000538970 CRIP2P52943 208 aaPredicted RBP9.7□□□□□ -0.86
VAMP1-206ENST00000538970 RPS27AP62979 156 aaKnown RBP9.7□□□□□ -0.86
VAMP1-206ENST00000538970 FAM27D1Q5T7N8 215 aa9.7□□□□□ -0.86
VAMP1-206ENST00000538970 OR10K2Q6IF99 312 aa9.7□□□□□ -0.86
VAMP1-206ENST00000538970 FAM131AQ6UXB0 335 aa9.7□□□□□ -0.86
VAMP1-206ENST00000538970 C6orf201Q7Z4U5 140 aa9.7□□□□□ -0.86
VAMP1-206ENST00000538970 LRRTM1Q86UE6 522 aa9.7□□□□□ -0.86
VAMP1-206ENST00000538970 SVOPQ8N4V2 548 aa9.7□□□□□ -0.86
VAMP1-206ENST00000538970 NANOGP1Q8N7R0 232 aa9.7□□□□□ -0.86
VAMP1-206ENST00000538970 NEDD4LQ96PU5 975 aa9.7□□□□□ -0.86
VAMP1-206ENST00000538970 NICN1Q9BSH3 213 aa9.7□□□□□ -0.86
VAMP1-206ENST00000538970 FAAP24Q9BTP7 215 aa9.7□□□□□ -0.86
VAMP1-206ENST00000538970 TMEM59Q9BXS4 323 aa9.7□□□□□ -0.86
VAMP1-206ENST00000538970 ISYNA1Q9NPH2 558 aa9.7□□□□□ -0.86
VAMP1-206ENST00000538970 FKBP14Q9NWM8 211 aa9.7□□□□□ -0.86
VAMP1-206ENST00000538970 ABRACLQ9P1F3 81 aa9.7□□□□□ -0.86
VAMP1-206ENST00000538970 KIAA1456Q9P272 454 aa9.7□□□□□ -0.86
VAMP1-206ENST00000538970 LRRC42Q9Y546 428 aa9.7□□□□□ -0.86
VAMP1-206ENST00000538970 ST8SIA5O15466 376 aa9.69□□□□□ -0.86
VAMP1-206ENST00000538970 SOX15O60248 233 aa9.69□□□□□ -0.86
VAMP1-206ENST00000538970 NAPSAO96009 420 aa9.69□□□□□ -0.86
VAMP1-206ENST00000538970 HTR2CP28335 458 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms