RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 SLC31A2O15432 143 aa11.8□□□□□ -0.52
LRRK1-211ENST00000538064 TXNL1O43396 289 aa11.8□□□□□ -0.52
LRRK1-211ENST00000538064 SMIM18P0DKX4 95 aa11.8□□□□□ -0.52
LRRK1-211ENST00000538064 BLVRBP30043 206 aaPredicted RBP11.8□□□□□ -0.52
LRRK1-211ENST00000538064 ZNF137PP52743 207 aa11.8□□□□□ -0.52
LRRK1-211ENST00000538064 HNF4GQ14541 408 aa11.8□□□□□ -0.52
LRRK1-211ENST00000538064 SIGIRRQ6IA17 410 aa11.8□□□□□ -0.52
LRRK1-211ENST00000538064 Q6ZPA2 131 aa11.8□□□□□ -0.52
LRRK1-211ENST00000538064 SLC25A48Q6ZT89 311 aaKnown RBP11.8□□□□□ -0.52
LRRK1-211ENST00000538064 MOB3BQ86TA1 216 aa11.8□□□□□ -0.52
LRRK1-211ENST00000538064 ZNF439Q8NDP4 499 aa11.8□□□□□ -0.52
LRRK1-211ENST00000538064 OR56B1Q8NGI3 324 aa11.8□□□□□ -0.52
LRRK1-211ENST00000538064 OR4K15Q8NH41 348 aa11.8□□□□□ -0.52
LRRK1-211ENST00000538064 CHPT1Q8WUD6 406 aa11.8□□□□□ -0.52
LRRK1-211ENST00000538064 EAF1Q96JC9 268 aaPredicted RBP11.8□□□□□ -0.52
LRRK1-211ENST00000538064 PLEKHJ1Q9NW61 149 aa11.8□□□□□ -0.52
LRRK1-211ENST00000538064 GNG12Q9UBI6 72 aa11.8□□□□□ -0.52
LRRK1-211ENST00000538064 IGHV3-72A0A0B4J1Y9 119 aa11.79□□□□□ -0.52
LRRK1-211ENST00000538064 TMEM272A0A1B0GTI8 110 aa11.79□□□□□ -0.52
LRRK1-211ENST00000538064 UBE2QL1A1L167 161 aa11.79□□□□□ -0.52
LRRK1-211ENST00000538064 SMIM30A4D0T7 59 aa11.79□□□□□ -0.52
LRRK1-211ENST00000538064 METTL21EPA6NDL7 271 aa11.79□□□□□ -0.52
LRRK1-211ENST00000538064 SERPINE3A8MV23 424 aa11.79□□□□□ -0.52
LRRK1-211ENST00000538064 LDLRAD4O15165 306 aa11.79□□□□□ -0.52
LRRK1-211ENST00000538064 TMEM127O75204 238 aa11.79□□□□□ -0.52
LRRK1-211ENST00000538064 IGHG2P01859 326 aa11.79□□□□□ -0.52
LRRK1-211ENST00000538064 HBZP02008 142 aa11.79□□□□□ -0.52
LRRK1-211ENST00000538064 RAB6AP20340 208 aa11.79□□□□□ -0.52
LRRK1-211ENST00000538064 CHATP28329 748 aa11.79□□□□□ -0.52
LRRK1-211ENST00000538064 MXD1Q05195 221 aa11.79□□□□□ -0.52
LRRK1-211ENST00000538064 SFXN4Q6P4A7 337 aa11.79□□□□□ -0.52
LRRK1-211ENST00000538064 SLC35E3Q7Z769 313 aa11.79□□□□□ -0.52
LRRK1-211ENST00000538064 ZNF554Q86TJ5 538 aa11.79□□□□□ -0.52
LRRK1-211ENST00000538064 TGIF2LXQ8IUE1 241 aa11.79□□□□□ -0.52
LRRK1-211ENST00000538064 FAM89BQ8N5H3 189 aa11.79□□□□□ -0.52
LRRK1-211ENST00000538064 OR13F1Q8NGS4 319 aa11.79□□□□□ -0.52
LRRK1-211ENST00000538064 OR2T10Q8NGZ9 312 aa11.79□□□□□ -0.52
LRRK1-211ENST00000538064 OR1L1Q8NH94 360 aa11.79□□□□□ -0.52
LRRK1-211ENST00000538064 NOL4LQ96MY1 436 aaPredicted RBP11.79□□□□□ -0.52
LRRK1-211ENST00000538064 NICN1Q9BSH3 213 aa11.79□□□□□ -0.52
LRRK1-211ENST00000538064 RNF167Q9H6Y7 350 aa11.79□□□□□ -0.52
LRRK1-211ENST00000538064 MBNL3Q9NUK0 354 aaKnown RBP11.79□□□□□ -0.52
LRRK1-211ENST00000538064 AURKAIP1Q9NWT8 199 aaPredicted RBP11.79□□□□□ -0.52
LRRK1-211ENST00000538064 DAPK2Q9UIK4 370 aa11.79□□□□□ -0.52
LRRK1-211ENST00000538064 IGLL1P15814 213 aa11.78□□□□□ -0.52
LRRK1-211ENST00000538064 RCC1P18754 421 aaPredicted RBP11.78□□□□□ -0.52
LRRK1-211ENST00000538064 CD1BP29016 333 aa11.78□□□□□ -0.52
LRRK1-211ENST00000538064 VEGFCP49767 419 aa11.78□□□□□ -0.52
LRRK1-211ENST00000538064 RPL23AP62750 156 aaKnown RBP11.78□□□□□ -0.52
LRRK1-211ENST00000538064 SLC35B1P78383 322 aa11.78□□□□□ -0.52
LRRK1-211ENST00000538064 FOXB2Q5VYV0 432 aa11.78□□□□□ -0.52
LRRK1-211ENST00000538064 C6orf201Q7Z4U5 140 aa11.78□□□□□ -0.52
LRRK1-211ENST00000538064 ZNF329Q86UD4 541 aa11.78□□□□□ -0.52
LRRK1-211ENST00000538064 NR2C2APQ86WQ0 139 aa11.78□□□□□ -0.52
LRRK1-211ENST00000538064 CROCCP3Q8IVE0 287 aa11.78□□□□□ -0.52
LRRK1-211ENST00000538064 FOXRED2Q8IWF2 684 aa11.78□□□□□ -0.52
LRRK1-211ENST00000538064 PRR18Q8N4B5 295 aa11.78□□□□□ -0.52
LRRK1-211ENST00000538064 OR10V1Q8NGI7 309 aa11.78□□□□□ -0.52
LRRK1-211ENST00000538064 MRPL30Q8TCC3 161 aaKnown RBP11.78□□□□□ -0.52
LRRK1-211ENST00000538064 PTX4Q96A99 478 aa11.78□□□□□ -0.52
LRRK1-211ENST00000538064 RCC1LQ96I51 464 aaKnown RBP11.78□□□□□ -0.52
LRRK1-211ENST00000538064 FAAP24Q9BTP7 215 aa11.78□□□□□ -0.52
LRRK1-211ENST00000538064 FUNDC2Q9BWH2 189 aa11.78□□□□□ -0.52
LRRK1-211ENST00000538064 RIMS4Q9H426 269 aaPredicted RBP11.78□□□□□ -0.52
LRRK1-211ENST00000538064 LIN7CQ9NUP9 197 aaKnown RBP11.78□□□□□ -0.52
LRRK1-211ENST00000538064 KCNIP1Q9NZI2 227 aa11.78□□□□□ -0.52
LRRK1-211ENST00000538064 HSF4Q9ULV5 492 aa11.78□□□□□ -0.52
LRRK1-211ENST00000538064 A0A0A6YYD4 124 aa11.77□□□□□ -0.53
LRRK1-211ENST00000538064 SOCS1O15524 211 aa11.77□□□□□ -0.53
LRRK1-211ENST00000538064 MOSP00540 346 aa11.77□□□□□ -0.53
LRRK1-211ENST00000538064 SLC2A2P11168 524 aaPredicted RBP11.77□□□□□ -0.53
LRRK1-211ENST00000538064 GPR12P47775 334 aa11.77□□□□□ -0.53
LRRK1-211ENST00000538064 ZNF134P52741 427 aa11.77□□□□□ -0.53
LRRK1-211ENST00000538064 SCAND1P57086 179 aa11.77□□□□□ -0.53
LRRK1-211ENST00000538064 LSM3P62310 102 aaKnown RBP11.77□□□□□ -0.53
LRRK1-211ENST00000538064 CT45A1Q5HYN5 189 aa11.77□□□□□ -0.53
LRRK1-211ENST00000538064 ETV3LQ6ZN32 361 aa11.77□□□□□ -0.53
LRRK1-211ENST00000538064 STPG2Q8N412 459 aa11.77□□□□□ -0.53
LRRK1-211ENST00000538064 COMMD1Q8N668 190 aa11.77□□□□□ -0.53
LRRK1-211ENST00000538064 Q8N9W7 124 aa11.77□□□□□ -0.53
LRRK1-211ENST00000538064 OR8H1Q8NGG4 311 aa11.77□□□□□ -0.53
LRRK1-211ENST00000538064 CT45A3Q8NHU0 189 aa11.77□□□□□ -0.53
LRRK1-211ENST00000538064 MRAPQ8TCY5 172 aa11.77□□□□□ -0.53
LRRK1-211ENST00000538064 CYYR1Q96J86 154 aa11.77□□□□□ -0.53
LRRK1-211ENST00000538064 SULT4A1Q9BR01 284 aa11.77□□□□□ -0.53
LRRK1-211ENST00000538064 ABCG5Q9H222 651 aa11.77□□□□□ -0.53
LRRK1-211ENST00000538064 TAF9BQ9HBM6 251 aa11.77□□□□□ -0.53
LRRK1-211ENST00000538064 CHMP1AQ9HD42 196 aaPredicted RBP11.77□□□□□ -0.53
LRRK1-211ENST00000538064 JPT1Q9UK76 154 aa11.77□□□□□ -0.53
LRRK1-211ENST00000538064 NCBP2LA6PVI3 153 aaKnown RBP11.76□□□□□ -0.53
LRRK1-211ENST00000538064 AP4M1O00189 453 aa11.76□□□□□ -0.53
LRRK1-211ENST00000538064 DUS4LO95620 317 aaKnown RBP11.76□□□□□ -0.53
LRRK1-211ENST00000538064 CLEC2LP0C7M8 214 aa11.76□□□□□ -0.53
LRRK1-211ENST00000538064 SLC6A1P30531 599 aa11.76□□□□□ -0.53
LRRK1-211ENST00000538064 GNMTQ14749 295 aa11.76□□□□□ -0.53
LRRK1-211ENST00000538064 ARL6IP1Q15041 203 aa11.76□□□□□ -0.53
LRRK1-211ENST00000538064 IDNKQ5T6J7 187 aa11.76□□□□□ -0.53
LRRK1-211ENST00000538064 STEAP3Q658P3 488 aa11.76□□□□□ -0.53
LRRK1-211ENST00000538064 GPR141Q7Z602 305 aa11.76□□□□□ -0.53
LRRK1-211ENST00000538064 LINC00482Q8N8I6 264 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms