RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 KCTD7Q96MP8 289 aa1.54□□□□□ -2.16
CD44-234ENST00000531873 MROQ9BYG7 248 aa1.54□□□□□ -2.16
CD44-234ENST00000531873 ARL6Q9H0F7 186 aa1.54□□□□□ -2.16
CD44-234ENST00000531873 GTSF1LQ9H1H1 148 aa1.54□□□□□ -2.16
CD44-234ENST00000531873 C11orf49Q9H6J7 331 aa1.54□□□□□ -2.16
CD44-234ENST00000531873 SPANXB1Q9NS25 103 aaPredicted RBP1.54□□□□□ -2.16
CD44-234ENST00000531873 FAM206AQ9NX38 181 aa1.54□□□□□ -2.16
CD44-234ENST00000531873 TAS2R1Q9NYW7 299 aa1.54□□□□□ -2.16
CD44-234ENST00000531873 LINC00527Q9UJ94 153 aa1.54□□□□□ -2.16
CD44-234ENST00000531873 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.54□□□□□ -2.16
CD44-234ENST00000531873 PHLDA3Q9Y5J5 127 aa1.54□□□□□ -2.16
CD44-234ENST00000531873 CD109Q6YHK3 1445 aa1.54□□□□□ -2.16
CD44-234ENST00000531873 MADDQ8WXG6 1647 aa1.54□□□□□ -2.16
CD44-234ENST00000531873 B4DEV8 164 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 C15orf65H3BRN8 121 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 H3BSA7 217 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 M0QYV0 167 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 LECT2O14960 151 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 MED14O60244 1454 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 ADCY9O60503 1353 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 PSMG1O95456 288 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 ATP5G1P05496 136 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 C8orf88P0DMB2 117 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 ZNF708P17019 499 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 CXCL3P19876 107 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 PSMA1P25786 263 aaKnown RBP1.53□□□□□ -2.16
CD44-234ENST00000531873 MIPP30301 263 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 IFNGR2P38484 337 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 CUX1P39880 1505 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 CD79BP40259 229 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 MAGEA2P43356 314 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 LINC00313P59037 77 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 GABARAPL2P60520 117 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 DEFA6Q01524 100 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 FLI1Q01543 452 aaPredicted RBP1.53□□□□□ -2.16
CD44-234ENST00000531873 MLLT11Q13015 90 aaPredicted RBP1.53□□□□□ -2.16
CD44-234ENST00000531873 MYO9BQ13459 2157 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 URB2Q14146 1524 aaKnown RBP1.53□□□□□ -2.16
CD44-234ENST00000531873 C10orf91Q5T1B1 145 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 AMMECR1LQ6DCA0 310 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 PAGE2Q7Z2X7 111 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 NIT1Q86X76 327 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 ZBTB8OSQ8IWT0 167 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 LYPD1Q8N2G4 141 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 LINC00304Q8N9R0 145 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 BPIFB6Q8NFQ5 453 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 OR10D3Q8NH80 312 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 SLC37A2Q8TED4 501 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 TOPBP1Q92547 1522 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 GALMQ96C23 342 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 KIAA0586Q9BVV6 1533 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 CDCA4Q9BXL8 241 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 PARD6GQ9BYG4 376 aaPredicted RBP1.53□□□□□ -2.16
CD44-234ENST00000531873 KCNIP2Q9NS61 270 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 SLC23A2Q9UGH3 650 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 GLS2Q9UI32 602 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 TRAPPC8Q9Y2L5 1435 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 WDR7Q9Y4E6 1490 aa1.53□□□□□ -2.16
CD44-234ENST00000531873 ANKRD11Q6UB99 2663 aaPredicted RBP1.53□□□□□ -2.17
CD44-234ENST00000531873 CHD1O14646 1710 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 KIF21BO75037 1637 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 NWD1Q149M9 1564 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 FANCAO15360 1455 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 TCOF1Q13428 1488 aaKnown RBP1.52□□□□□ -2.17
CD44-234ENST00000531873 BCL9LQ86UU0 1499 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 RALGAPBQ86X10 1494 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 BAHCC1Q9P281 2608 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 TRBV24-1A0A075B6N3 115 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 A0A1B0GU33 70 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 GGTLC3B5MD39 225 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 H0Y980 276 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 ZW10O43264 779 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 SH2D1AO60880 128 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 KLHL2O95198 593 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 CPSF4O95639 269 aaKnown RBP1.52□□□□□ -2.17
CD44-234ENST00000531873 GYPCP04921 128 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 GUSBP08236 651 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 LINC00614P0C842 121 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 ORM2P19652 201 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 CXCL2P19875 107 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 CFL1P23528 166 aaKnown RBP1.52□□□□□ -2.17
CD44-234ENST00000531873 COL8A2P25067 703 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 HSPA9P38646 679 aaKnown RBP1.52□□□□□ -2.17
CD44-234ENST00000531873 BLVRAP53004 296 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 H2BFSP57053 126 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 KRTAP10-10P60014 251 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 MYL6P60660 151 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 DAD1P61803 113 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 BSPH1Q075Z2 132 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 OR8G1Q15617 311 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 LGALSLQ3ZCW2 172 aaPredicted RBP1.52□□□□□ -2.17
CD44-234ENST00000531873 LCN8Q6JVE9 175 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 LYZL2Q7Z4W2 148 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 ZFAND2AQ8N6M9 145 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 Q8NAQ8 132 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 OR51H1Q8NH63 302 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 ACY3Q96HD9 319 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 TRIB3Q96RU7 358 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 C1QTNF6Q9BXI9 259 aa1.52□□□□□ -2.17
CD44-234ENST00000531873 DERL2Q9GZP9 239 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms