RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 ZNF146Q15072 292 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 ELOBQ15370 118 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 ZNF343Q6P1L6 599 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 DRAM1Q8N682 238 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 Q8WTZ3 238 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 TCTEX1D2Q8WW35 142 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 PSMG3Q9BT73 122 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-228ENST00000524023 BCL2L14Q9BZR8 327 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 SIRT7Q9NRC8 400 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 GNG13Q9P2W3 67 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 SPRR3Q9UBC9 169 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 DIDO1Q9BTC0 2240 aaKnown RBP9.35□□□□□ -0.91
HDAC9-228ENST00000524023 CXorf65A6NEN9 183 aa9.35□□□□□ -0.91
HDAC9-228ENST00000524023 SH2D1BO14796 132 aa9.35□□□□□ -0.91
HDAC9-228ENST00000524023 CLN5O75503 358 aa9.35□□□□□ -0.91
HDAC9-228ENST00000524023 NXPH2O95156 264 aa9.35□□□□□ -0.91
HDAC9-228ENST00000524023 CD59P13987 128 aa9.35□□□□□ -0.91
HDAC9-228ENST00000524023 CD46P15529 392 aa9.35□□□□□ -0.91
HDAC9-228ENST00000524023 ERVS71-1P61550 626 aa9.35□□□□□ -0.91
HDAC9-228ENST00000524023 PPP1CBP62140 327 aa9.35□□□□□ -0.91
HDAC9-228ENST00000524023 HBG1P69891 147 aa9.35□□□□□ -0.91
HDAC9-228ENST00000524023 HBG2P69892 147 aa9.35□□□□□ -0.91
HDAC9-228ENST00000524023 ZNF726P1Q15940 193 aa9.35□□□□□ -0.91
HDAC9-228ENST00000524023 LRRC75BQ2VPJ9 315 aa9.35□□□□□ -0.91
HDAC9-228ENST00000524023 ALKBH6Q3KRA9 238 aa9.35□□□□□ -0.91
HDAC9-228ENST00000524023 RNFT1Q5M7Z0 435 aa9.35□□□□□ -0.91
HDAC9-228ENST00000524023 MBD3L1Q8WWY6 194 aa9.35□□□□□ -0.91
HDAC9-228ENST00000524023 FER1L6-AS2Q96M78 137 aa9.35□□□□□ -0.91
HDAC9-228ENST00000524023 TMEM9BQ9NQ34 198 aa9.35□□□□□ -0.91
HDAC9-228ENST00000524023 CISD1Q9NZ45 108 aaKnown RBP9.35□□□□□ -0.91
HDAC9-228ENST00000524023 OR14J1Q9UGF5 321 aa9.35□□□□□ -0.91
HDAC9-228ENST00000524023 RNF150Q9ULK6 438 aa9.35□□□□□ -0.91
HDAC9-228ENST00000524023 GTF3C1Q12789 2109 aa9.35□□□□□ -0.91
HDAC9-228ENST00000524023 URB1O60287 2271 aaKnown RBP9.35□□□□□ -0.91
HDAC9-228ENST00000524023 TRGV5A0A0B4J1U4 118 aa9.34□□□□□ -0.91
HDAC9-228ENST00000524023 PPIHO43447 177 aaKnown RBP9.34□□□□□ -0.91
HDAC9-228ENST00000524023 CXCL1P09341 107 aa9.34□□□□□ -0.91
HDAC9-228ENST00000524023 GLIPR1P48060 266 aa9.34□□□□□ -0.91
HDAC9-228ENST00000524023 ERVFRD-1P60508 538 aa9.34□□□□□ -0.91
HDAC9-228ENST00000524023 MRPL49Q13405 166 aaKnown RBP9.34□□□□□ -0.91
HDAC9-228ENST00000524023 KIAA0141Q14154 515 aaPredicted RBP9.34□□□□□ -0.91
HDAC9-228ENST00000524023 FAM90A2PQ658T7 463 aa9.34□□□□□ -0.91
HDAC9-228ENST00000524023 ZNF787Q6DD87 383 aa9.34□□□□□ -0.91
HDAC9-228ENST00000524023 SSX7Q7RTT5 188 aa9.34□□□□□ -0.91
HDAC9-228ENST00000524023 ZNF665Q9H7R5 613 aa9.34□□□□□ -0.91
HDAC9-228ENST00000524023 NIT2Q9NQR4 276 aa9.34□□□□□ -0.91
HDAC9-228ENST00000524023 CHD3Q12873 2000 aaKnown RBP9.34□□□□□ -0.91
HDAC9-228ENST00000524023 IGHV3-64DA0A0J9YX35 117 aa9.34□□□□□ -0.91
HDAC9-228ENST00000524023 ZFP92A6NM28 416 aa9.34□□□□□ -0.91
HDAC9-228ENST00000524023 BCL2P10415 239 aa9.34□□□□□ -0.91
HDAC9-228ENST00000524023 IDH3GP51553 393 aaPredicted RBP9.34□□□□□ -0.91
HDAC9-228ENST00000524023 RAB11AP62491 216 aa9.34□□□□□ -0.91
HDAC9-228ENST00000524023 SERF2P84101 59 aa9.34□□□□□ -0.91
HDAC9-228ENST00000524023 ACSF3Q4G176 576 aaPredicted RBP9.34□□□□□ -0.91
HDAC9-228ENST00000524023 SPANXN5Q5MJ07 72 aa9.34□□□□□ -0.91
HDAC9-228ENST00000524023 NCMAPQ5T1S8 102 aa9.34□□□□□ -0.91
HDAC9-228ENST00000524023 LCN15Q6UWW0 184 aa9.34□□□□□ -0.91
HDAC9-228ENST00000524023 LILRB2Q8N423 598 aa9.34□□□□□ -0.91
HDAC9-228ENST00000524023 FGFRL1Q8N441 504 aa9.34□□□□□ -0.91
HDAC9-228ENST00000524023 SLC25A40Q8TBP6 338 aa9.34□□□□□ -0.91
HDAC9-228ENST00000524023 RCC1LQ96I51 464 aaKnown RBP9.34□□□□□ -0.91
HDAC9-228ENST00000524023 CDH20Q9HBT6 801 aa9.34□□□□□ -0.91
HDAC9-228ENST00000524023 GSN-AS1Q9NRJ2 163 aa9.34□□□□□ -0.91
HDAC9-228ENST00000524023 URGCP-MRPS24S4R325 110 aa9.34□□□□□ -0.91
HDAC9-228ENST00000524023 RNF212BA8MTL3 300 aa9.33□□□□□ -0.92
HDAC9-228ENST00000524023 B4DEV8 164 aa9.33□□□□□ -0.92
HDAC9-228ENST00000524023 FAM90A26D6RGX4 464 aa9.33□□□□□ -0.92
HDAC9-228ENST00000524023 FABP1P07148 127 aa9.33□□□□□ -0.92
HDAC9-228ENST00000524023 RAC2P15153 192 aa9.33□□□□□ -0.92
HDAC9-228ENST00000524023 FGF8P55075 233 aaPredicted RBP9.33□□□□□ -0.92
HDAC9-228ENST00000524023 ZNF766Q5HY98 468 aa9.33□□□□□ -0.92
HDAC9-228ENST00000524023 OR4C12Q96R67 309 aa9.33□□□□□ -0.92
HDAC9-228ENST00000524023 PARD6GQ9BYG4 376 aaPredicted RBP9.33□□□□□ -0.92
HDAC9-228ENST00000524023 WDR61Q9GZS3 305 aaKnown RBP9.33□□□□□ -0.92
HDAC9-228ENST00000524023 TMPRSS5Q9H3S3 457 aa9.33□□□□□ -0.92
HDAC9-228ENST00000524023 USF3Q68DE3 2245 aa9.33□□□□□ -0.92
HDAC9-228ENST00000524023 TGIF2-C20orf24A0A0A6YYL0 155 aa9.33□□□□□ -0.92
HDAC9-228ENST00000524023 IQCF6A8MYZ5 107 aa9.33□□□□□ -0.92
HDAC9-228ENST00000524023 TNFSF15O95150 251 aa9.33□□□□□ -0.92
HDAC9-228ENST00000524023 HAND1O96004 215 aa9.33□□□□□ -0.92
HDAC9-228ENST00000524023 GRPP07492 148 aa9.33□□□□□ -0.92
HDAC9-228ENST00000524023 SELEP16581 610 aa9.33□□□□□ -0.92
HDAC9-228ENST00000524023 HOXA5P20719 270 aa9.33□□□□□ -0.92
HDAC9-228ENST00000524023 IGHV1-2P23083 117 aa9.33□□□□□ -0.92
HDAC9-228ENST00000524023 CEBPDP49716 269 aaPredicted RBP9.33□□□□□ -0.92
HDAC9-228ENST00000524023 UBE2NP61088 152 aaKnown RBP9.33□□□□□ -0.92
HDAC9-228ENST00000524023 PSG7Q13046 419 aa9.33□□□□□ -0.92
HDAC9-228ENST00000524023 GABRA6Q16445 453 aa9.33□□□□□ -0.92
HDAC9-228ENST00000524023 ZNF674Q2M3X9 581 aa9.33□□□□□ -0.92
HDAC9-228ENST00000524023 TMEM41BQ5BJD5 291 aa9.33□□□□□ -0.92
HDAC9-228ENST00000524023 ATP1A1-AS1Q5TC04 95 aa9.33□□□□□ -0.92
HDAC9-228ENST00000524023 CA5BP1Q8WTZ4 195 aa9.33□□□□□ -0.92
HDAC9-228ENST00000524023 GMPPAQ96IJ6 420 aaPredicted RBP9.33□□□□□ -0.92
HDAC9-228ENST00000524023 TMEM210A6NLX4 147 aa9.32□□□□□ -0.92
HDAC9-228ENST00000524023 LINC00587B1AMM8 73 aa9.32□□□□□ -0.92
HDAC9-228ENST00000524023 CDX4O14627 284 aaPredicted RBP9.32□□□□□ -0.92
HDAC9-228ENST00000524023 PSPNO60542 156 aa9.32□□□□□ -0.92
HDAC9-228ENST00000524023 SLC38A11Q08AI6 406 aa9.32□□□□□ -0.92
HDAC9-228ENST00000524023 TMEM14EPQ6UXP3 125 aa9.32□□□□□ -0.92
HDAC9-228ENST00000524023 ZNF645Q8N7E2 425 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms