RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 SSX1Q16384 188 aa13.68□□□□□ -0.22
CCNC-213ENST00000523541 FOXRED2Q8IWF2 684 aa13.68□□□□□ -0.22
CCNC-213ENST00000523541 OR51D1Q8NGF3 324 aa13.68□□□□□ -0.22
CCNC-213ENST00000523541 OR10V1Q8NGI7 309 aa13.68□□□□□ -0.22
CCNC-213ENST00000523541 NICN1Q9BSH3 213 aa13.68□□□□□ -0.22
CCNC-213ENST00000523541 ABHD14AQ9BUJ0 271 aa13.68□□□□□ -0.22
CCNC-213ENST00000523541 GON7Q9BXV9 100 aa13.68□□□□□ -0.22
CCNC-213ENST00000523541 CHMP1AQ9HD42 196 aaPredicted RBP13.68□□□□□ -0.22
CCNC-213ENST00000523541 A0A0A6YYD4 124 aa13.67□□□□□ -0.22
CCNC-213ENST00000523541 NCBP2LA6PVI3 153 aaKnown RBP13.67□□□□□ -0.22
CCNC-213ENST00000523541 FOXI3A8MTJ6 420 aaPredicted RBP13.67□□□□□ -0.22
CCNC-213ENST00000523541 LDLRAD4O15165 306 aa13.67□□□□□ -0.22
CCNC-213ENST00000523541 SLC31A2O15432 143 aa13.67□□□□□ -0.22
CCNC-213ENST00000523541 SOCS1O15524 211 aa13.67□□□□□ -0.22
CCNC-213ENST00000523541 PF4P02776 101 aa13.67□□□□□ -0.22
CCNC-213ENST00000523541 MYL9P24844 172 aa13.67□□□□□ -0.22
CCNC-213ENST00000523541 SLC6A1P30531 599 aa13.67□□□□□ -0.22
CCNC-213ENST00000523541 TMEM50BP56557 158 aa13.67□□□□□ -0.22
CCNC-213ENST00000523541 P2RY14Q15391 338 aa13.67□□□□□ -0.22
CCNC-213ENST00000523541 FAM71F2Q6NXP2 309 aa13.67□□□□□ -0.22
CCNC-213ENST00000523541 WFDC9Q8NEX5 89 aa13.67□□□□□ -0.22
CCNC-213ENST00000523541 OR2AK2Q8NG84 335 aa13.67□□□□□ -0.22
CCNC-213ENST00000523541 OR52L2PQ8NGH6 319 aa13.67□□□□□ -0.22
CCNC-213ENST00000523541 ABCG5Q9H222 651 aa13.67□□□□□ -0.22
CCNC-213ENST00000523541 PIPOXQ9P0Z9 390 aa13.67□□□□□ -0.22
CCNC-213ENST00000523541 PSMB11A5LHX3 300 aa13.66□□□□□ -0.22
CCNC-213ENST00000523541 CD33P20138 364 aa13.66□□□□□ -0.22
CCNC-213ENST00000523541 FGF9P31371 208 aaPredicted RBP13.66□□□□□ -0.22
CCNC-213ENST00000523541 SLC35B1P78383 322 aa13.66□□□□□ -0.22
CCNC-213ENST00000523541 SLC35E3Q7Z769 313 aa13.66□□□□□ -0.22
CCNC-213ENST00000523541 SPARTQ8N0X7 666 aa13.66□□□□□ -0.22
CCNC-213ENST00000523541 PTX4Q96A99 478 aa13.66□□□□□ -0.22
CCNC-213ENST00000523541 RASL11BQ9BPW5 248 aa13.66□□□□□ -0.22
CCNC-213ENST00000523541 CHCHD6Q9BRQ6 235 aa13.66□□□□□ -0.22
CCNC-213ENST00000523541 CENPOQ9BU64 300 aa13.66□□□□□ -0.22
CCNC-213ENST00000523541 C12orf4Q9NQ89 552 aa13.66□□□□□ -0.22
CCNC-213ENST00000523541 PLSCR3Q9NRY6 295 aa13.66□□□□□ -0.22
CCNC-213ENST00000523541 ZFP57Q9NU63 452 aa13.66□□□□□ -0.22
CCNC-213ENST00000523541 IGHV3-72A0A0B4J1Y9 119 aa13.65□□□□□ -0.22
CCNC-213ENST00000523541 IFITM5A6NNB3 132 aa13.65□□□□□ -0.22
CCNC-213ENST00000523541 SERPINE3A8MV23 424 aa13.65□□□□□ -0.22
CCNC-213ENST00000523541 AP4M1O00189 453 aa13.65□□□□□ -0.22
CCNC-213ENST00000523541 RAB29O14966 203 aa13.65□□□□□ -0.22
CCNC-213ENST00000523541 RAB3BP20337 219 aa13.65□□□□□ -0.22
CCNC-213ENST00000523541 RAB6AP20340 208 aa13.65□□□□□ -0.22
CCNC-213ENST00000523541 ZBTB25P24278 435 aa13.65□□□□□ -0.22
CCNC-213ENST00000523541 PPP1CCP36873 323 aaKnown RBP13.65□□□□□ -0.22
CCNC-213ENST00000523541 VEGFCP49767 419 aa13.65□□□□□ -0.22
CCNC-213ENST00000523541 TCTEX1D4Q5JR98 221 aa13.65□□□□□ -0.22
CCNC-213ENST00000523541 FAM53AQ6NSI3 398 aaPredicted RBP13.65□□□□□ -0.22
CCNC-213ENST00000523541 ZNF833PQ6ZTB9 187 aa13.65□□□□□ -0.22
CCNC-213ENST00000523541 ODF3L1Q8IXM7 274 aa13.65□□□□□ -0.22
CCNC-213ENST00000523541 Q8N9W7 124 aa13.65□□□□□ -0.22
CCNC-213ENST00000523541 EDARADDQ8WWZ3 215 aa13.65□□□□□ -0.22
CCNC-213ENST00000523541 S1PR3Q99500 378 aa13.65□□□□□ -0.22
CCNC-213ENST00000523541 AK3Q9UIJ7 227 aa13.65□□□□□ -0.22
CCNC-213ENST00000523541 ZNF580Q9UK33 172 aa13.65□□□□□ -0.22
CCNC-213ENST00000523541 LSAMPQ13449 338 aa13.64□□□□□ -0.23
CCNC-213ENST00000523541 ARL6IP1Q15041 203 aa13.64□□□□□ -0.23
CCNC-213ENST00000523541 BEAN1Q3B7T3 259 aa13.64□□□□□ -0.23
CCNC-213ENST00000523541 OXLD1Q5BKU9 147 aa13.64□□□□□ -0.23
CCNC-213ENST00000523541 KPRPQ5T749 579 aaPredicted RBP13.64□□□□□ -0.23
CCNC-213ENST00000523541 SAMD5Q5TGI4 173 aa13.64□□□□□ -0.23
CCNC-213ENST00000523541 TPRA1Q86W33 373 aa13.64□□□□□ -0.23
CCNC-213ENST00000523541 IL1F10Q8WWZ1 152 aa13.64□□□□□ -0.23
CCNC-213ENST00000523541 ARHGAP5-AS1Q96IT6 56 aa13.64□□□□□ -0.23
CCNC-213ENST00000523541 CMSS1Q9BQ75 279 aaKnown RBP13.64□□□□□ -0.23
CCNC-213ENST00000523541 PECRQ9BY49 303 aa13.64□□□□□ -0.23
CCNC-213ENST00000523541 KCNK15Q9H427 330 aa13.64□□□□□ -0.23
CCNC-213ENST00000523541 Q9N2K0 584 aa13.64□□□□□ -0.23
CCNC-213ENST00000523541 SLC23A1Q9UHI7 598 aa13.64□□□□□ -0.23
CCNC-213ENST00000523541 TMEM272A0A1B0GTI8 110 aa13.63□□□□□ -0.23
CCNC-213ENST00000523541 METTL21EPA6NDL7 271 aa13.63□□□□□ -0.23
CCNC-213ENST00000523541 DIRAS3O95661 229 aa13.63□□□□□ -0.23
CCNC-213ENST00000523541 PRB2P02812 416 aaPredicted RBP13.63□□□□□ -0.23
CCNC-213ENST00000523541 GADD45AP24522 165 aa13.63□□□□□ -0.23
CCNC-213ENST00000523541 CLDN12P56749 244 aa13.63□□□□□ -0.23
CCNC-213ENST00000523541 MRPS15P82914 257 aaKnown RBP13.63□□□□□ -0.23
CCNC-213ENST00000523541 GNMTQ14749 295 aa13.63□□□□□ -0.23
CCNC-213ENST00000523541 STPG2Q8N412 459 aa13.63□□□□□ -0.23
CCNC-213ENST00000523541 FAM71E2Q8N5Q1 922 aa13.63□□□□□ -0.23
CCNC-213ENST00000523541 SETD6Q8TBK2 473 aa13.63□□□□□ -0.23
CCNC-213ENST00000523541 ZNF736B4DX44 427 aaPredicted RBP13.62□□□□□ -0.23
CCNC-213ENST00000523541 RRP9O43818 475 aaKnown RBP13.62□□□□□ -0.23
CCNC-213ENST00000523541 MC5RP33032 325 aa13.62□□□□□ -0.23
CCNC-213ENST00000523541 SOX6P35712 828 aa13.62□□□□□ -0.23
CCNC-213ENST00000523541 GPR12P47775 334 aa13.62□□□□□ -0.23
CCNC-213ENST00000523541 SERPINB10P48595 397 aa13.62□□□□□ -0.23
CCNC-213ENST00000523541 HLA-DRB3P79483 266 aa13.62□□□□□ -0.23
CCNC-213ENST00000523541 SRSF7Q16629 238 aaKnown RBP eCLIP13.62□□□□□ -0.23
CCNC-213ENST00000523541 PNLIPRP3Q17RR3 467 aa13.62□□□□□ -0.23
CCNC-213ENST00000523541 HES5Q5TA89 166 aa13.62□□□□□ -0.23
CCNC-213ENST00000523541 TEX38Q6PEX7 206 aa13.62□□□□□ -0.23
CCNC-213ENST00000523541 C10orf99Q6UWK7 81 aa13.62□□□□□ -0.23
CCNC-213ENST00000523541 REC114Q7Z4M0 266 aa13.62□□□□□ -0.23
CCNC-213ENST00000523541 ZNF329Q86UD4 541 aa13.62□□□□□ -0.23
CCNC-213ENST00000523541 PHF21AQ96BD5 680 aa13.62□□□□□ -0.23
CCNC-213ENST00000523541 RAB3CQ96E17 227 aa13.62□□□□□ -0.23
CCNC-213ENST00000523541 NABP2Q9BQ15 211 aa13.62□□□□□ -0.23
CCNC-213ENST00000523541 TOLLIPQ9H0E2 274 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms