RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 NAAAQ02083 359 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 SSX2Q16385 188 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 BCL2L2Q92843 193 aaPredicted RBP11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 C5orf66Q9H5L9 145 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 MMP26Q9NRE1 261 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 OR5AC2Q9NZP5 309 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 MRPS18CQ9Y3D5 142 aaKnown RBP11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 ATXN7O15265 892 aaPredicted RBP11.2□□□□□ -0.62
PCDHGB1-201ENST00000523390 TNXAQ16473 311 aa11.2□□□□□ -0.62
PCDHGB1-201ENST00000523390 ANKRD55Q3KP44 614 aa11.2□□□□□ -0.62
PCDHGB1-201ENST00000523390 LHFPL5Q8TAF8 219 aa11.2□□□□□ -0.62
PCDHGB1-201ENST00000523390 HARBI1Q96MB7 349 aa11.2□□□□□ -0.62
PCDHGB1-201ENST00000523390 PATZ1Q9HBE1 687 aaKnown RBP11.2□□□□□ -0.62
PCDHGB1-201ENST00000523390 TNFSF18Q9UNG2 199 aa11.2□□□□□ -0.62
PCDHGB1-201ENST00000523390 RBP4P02753 201 aa11.2□□□□□ -0.62
PCDHGB1-201ENST00000523390 IGHV1-2P23083 117 aa11.2□□□□□ -0.62
PCDHGB1-201ENST00000523390 NDUFA6P56556 154 aa11.2□□□□□ -0.62
PCDHGB1-201ENST00000523390 ZIC4Q8N9L1 334 aa11.2□□□□□ -0.62
PCDHGB1-201ENST00000523390 MOB3AQ96BX8 217 aa11.2□□□□□ -0.62
PCDHGB1-201ENST00000523390 TMEM147Q9BVK8 224 aa11.2□□□□□ -0.62
PCDHGB1-201ENST00000523390 V9GYS6 101 aa11.2□□□□□ -0.62
PCDHGB1-201ENST00000523390 RHBDL1O75783 438 aa11.2□□□□□ -0.62
PCDHGB1-201ENST00000523390 CYB5R3P00387 301 aaPredicted RBP11.2□□□□□ -0.62
PCDHGB1-201ENST00000523390 SFTPCP11686 197 aa11.2□□□□□ -0.62
PCDHGB1-201ENST00000523390 H2BFSP57053 126 aa11.2□□□□□ -0.62
PCDHGB1-201ENST00000523390 OVCH2Q7RTZ1 564 aa11.2□□□□□ -0.62
PCDHGB1-201ENST00000523390 CLRN3Q8NCR9 226 aa11.2□□□□□ -0.62
PCDHGB1-201ENST00000523390 C12orf57Q99622 126 aa11.2□□□□□ -0.62
PCDHGB1-201ENST00000523390 ODAMA1E959 279 aa11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 KIAA0141Q14154 515 aaPredicted RBP11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 ACSF3Q4G176 576 aaPredicted RBP11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 OR5P3Q8WZ94 311 aa11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 DOK5Q9P104 306 aa11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 ZNF835Q9Y2P0 537 aa11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 POMT1Q9Y6A1 747 aa11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 GBF1Q92538 1859 aa11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 ZNF705GA8MUZ8 300 aaPredicted RBP11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 K7EQM0 130 aa11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 CEACAM3P40198 252 aa11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 PLAURQ03405 335 aa11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 SRSF6Q13247 344 aaKnown RBP11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 ASPHD2Q6ICH7 369 aa11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 ZBTB34Q8NCN2 500 aa11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 ZDHHC16Q969W1 377 aa11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 PPP5D1E7EU14 171 aa11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 TOX4O94842 621 aa11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 GLIPR1P48060 266 aa11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 NHLH2Q02577 135 aa11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 FGFBP3Q8TAT2 258 aa11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 CLEC3BP05452 202 aa11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 NMBP08949 121 aa11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 APELAP0DMC3 54 aa11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 ZP1P60852 638 aa11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 NCR3LG1Q68D85 454 aa11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 REPIN1Q9BWE0 567 aaKnown RBP11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 TUBG2Q9NRH3 451 aa11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 FKBP11Q9NYL4 201 aa11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 INSIG2Q9Y5U4 225 aa11.19□□□□□ -0.62
PCDHGB1-201ENST00000523390 FAM208BQ5VWN6 2430 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 A0A1B0GU03 582 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 SMPD2O60906 423 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 CD74P04233 296 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 IGFBP3P17936 291 aaPredicted RBP11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 PRR27Q6MZM9 219 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 ACSM6Q6P461 480 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 SAXO1Q8IYX7 474 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 BVESQ8NE79 360 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 VSTM2AQ8TAG5 236 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 OR10C1Q96KK4 312 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 CABLES2Q9BTV7 478 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 C1QTNF5Q9BXJ0 243 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 PIPOXQ9P0Z9 390 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 PLXNA2O75051 1894 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 PLXND1Q9Y4D7 1925 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 IGKV1-9A0A0C4DH69 117 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 TIMM23BQ5SRD1 257 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 GGNQ86UU5 652 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 COMMD1Q8N668 190 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 OR10G4Q8NGN3 311 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 OR10G9Q8NGN4 311 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 OR10G7Q8NGN6 311 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 NEIL1Q96FI4 390 aaPredicted RBP11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 SPRR3Q9UBC9 169 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 AMMECR1Q9Y4X0 333 aaPredicted RBP11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 BTCP35070 178 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 PSG7Q13046 419 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 LINC01560Q8TB33 94 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 SSMEM1Q8WWF3 244 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 SNX22Q96L94 193 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 ATP5SQ99766 215 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 ABHD14AQ9BUJ0 271 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 TECTAO75443 2155 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 SHANK1Q9Y566 2161 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 B3GALNT1O75752 331 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 OR13D1Q8NGV5 346 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 TMEM222Q9H0R3 208 aa11.18□□□□□ -0.62
PCDHGB1-201ENST00000523390 CACNA1AO00555 2505 aa11.17□□□□□ -0.62
PCDHGB1-201ENST00000523390 LY6G6EA0A0G2JKS1 128 aa11.17□□□□□ -0.62
PCDHGB1-201ENST00000523390 CSN1S1P47710 185 aa11.17□□□□□ -0.62
PCDHGB1-201ENST00000523390 CDC34P49427 236 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms