RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 EBPLQ9BY08 206 aa2.38□□□□□ -2.03
HMGB1P1-201ENST00000522557 SLC25A31Q9H0C2 315 aa2.38□□□□□ -2.03
HMGB1P1-201ENST00000522557 CHMP4BQ9H444 224 aaKnown RBP2.38□□□□□ -2.03
HMGB1P1-201ENST00000522557 VSIRQ9H7M9 311 aa2.38□□□□□ -2.03
HMGB1P1-201ENST00000522557 ZNF492Q9P255 531 aa2.38□□□□□ -2.03
HMGB1P1-201ENST00000522557 PUS1Q9Y606 427 aaKnown RBP eCLIP2.38□□□□□ -2.03
HMGB1P1-201ENST00000522557 GOLGB1Q14789 3259 aaKnown RBP2.38□□□□□ -2.03
HMGB1P1-201ENST00000522557 ADAMTSL1Q8N6G6 1762 aa2.38□□□□□ -2.03
HMGB1P1-201ENST00000522557 MED23Q9ULK4 1368 aa2.37□□□□□ -2.03
HMGB1P1-201ENST00000522557 CACNA1SQ13698 1873 aa2.37□□□□□ -2.03
HMGB1P1-201ENST00000522557 ANKRD31Q8N7Z5 1873 aa2.37□□□□□ -2.03
HMGB1P1-201ENST00000522557 COL5A3P25940 1745 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P1-201ENST00000522557 IGHV1-45A0A0A0MS14 117 aa2.37□□□□□ -2.03
HMGB1P1-201ENST00000522557 A8MWP4 228 aa2.37□□□□□ -2.03
HMGB1P1-201ENST00000522557 TOX3O15405 576 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P1-201ENST00000522557 NRASP01111 189 aa2.37□□□□□ -2.03
HMGB1P1-201ENST00000522557 HRASP01112 189 aa2.37□□□□□ -2.03
HMGB1P1-201ENST00000522557 KRASP01116 189 aa2.37□□□□□ -2.03
HMGB1P1-201ENST00000522557 COL8A2P25067 703 aa2.37□□□□□ -2.03
HMGB1P1-201ENST00000522557 FKBP1CQ5VVH2 108 aa2.37□□□□□ -2.03
HMGB1P1-201ENST00000522557 FAM19A3Q7Z5A8 133 aa2.37□□□□□ -2.03
HMGB1P1-201ENST00000522557 SPATA24Q86W54 205 aa2.37□□□□□ -2.03
HMGB1P1-201ENST00000522557 BOD1L2Q8IYS8 172 aa2.37□□□□□ -2.03
HMGB1P1-201ENST00000522557 C1orf64Q8NEQ6 169 aa2.37□□□□□ -2.03
HMGB1P1-201ENST00000522557 IFT81Q8WYA0 676 aa2.37□□□□□ -2.03
HMGB1P1-201ENST00000522557 PYURFQ96I23 114 aa2.37□□□□□ -2.03
HMGB1P1-201ENST00000522557 SEC22CQ9BRL7 303 aa2.37□□□□□ -2.03
HMGB1P1-201ENST00000522557 FAAP24Q9BTP7 215 aa2.37□□□□□ -2.03
HMGB1P1-201ENST00000522557 DSN1Q9H410 356 aa2.37□□□□□ -2.03
HMGB1P1-201ENST00000522557 C1orf109Q9NX04 203 aa2.37□□□□□ -2.03
HMGB1P1-201ENST00000522557 CACNA1GO43497 2377 aa2.37□□□□□ -2.03
HMGB1P1-201ENST00000522557 TJP1Q07157 1748 aa2.37□□□□□ -2.03
HMGB1P1-201ENST00000522557 DLEC1Q9Y238 1755 aa2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 PIEZO1Q92508 2521 aa2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 ZNF609O15014 1411 aa2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 A0A1W2PRG6 482 aa2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 GOLGA8IPA6NC78 632 aa2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 I3L4J1 428 aa2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 SULT1C2O00338 296 aa2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 HLA-AP01891 365 aaKnown RBP2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 PFN1P07737 140 aaKnown RBP2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 IL15RAQ13261 267 aa2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 CASP8Q14790 479 aa2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 HES3Q5TGS1 186 aa2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 CD302Q8IX05 232 aa2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 AMN1Q8IY45 258 aa2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 C3orf22Q8N5N4 141 aa2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 LRRC45Q96CN5 670 aa2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 TMEM56Q96MV1 263 aa2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 ZNF251Q9BRH9 671 aa2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 LLPHQ9BRT6 129 aaKnown RBP2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 TAPBPLQ9BX59 468 aa2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 PLA2G12AQ9BZM1 189 aa2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 TXNIPQ9H3M7 391 aa2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 ASCL3Q9NQ33 180 aa2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 INIPQ9NRY2 104 aa2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 ZNF780BQ9Y6R6 833 aa2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 R4GN34 69 aa2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 ADAMTS7Q9UKP4 1686 aa2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 PAPPA2Q9BXP8 1791 aa2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 SCN11AQ9UI33 1791 aa2.36□□□□□ -2.03
HMGB1P1-201ENST00000522557 ZSWIM8A7E2V4 1837 aa2.35□□□□□ -2.03
HMGB1P1-201ENST00000522557 COL1A1P02452 1464 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P1-201ENST00000522557 PCNTO95613 3336 aa2.35□□□□□ -2.03
HMGB1P1-201ENST00000522557 TRAV8-2A0A0B4J237 113 aa2.35□□□□□ -2.03
HMGB1P1-201ENST00000522557 FABP12A6NFH5 140 aa2.35□□□□□ -2.03
HMGB1P1-201ENST00000522557 H3BQ85 93 aa2.35□□□□□ -2.03
HMGB1P1-201ENST00000522557 GPR171O14626 319 aa2.35□□□□□ -2.03
HMGB1P1-201ENST00000522557 ITGB1BP1O14713 200 aa2.35□□□□□ -2.03
HMGB1P1-201ENST00000522557 ENTPD6O75354 484 aa2.35□□□□□ -2.03
HMGB1P1-201ENST00000522557 POP7O75817 140 aaKnown RBP2.35□□□□□ -2.03
HMGB1P1-201ENST00000522557 GTF2F2P13984 249 aa2.35□□□□□ -2.03
HMGB1P1-201ENST00000522557 CD34P28906 385 aa2.35□□□□□ -2.03
HMGB1P1-201ENST00000522557 RPL14P50914 215 aaKnown RBP2.35□□□□□ -2.03
HMGB1P1-201ENST00000522557 ZNF235Q14590 738 aa2.35□□□□□ -2.03
HMGB1P1-201ENST00000522557 MMDQ15546 238 aa2.35□□□□□ -2.03
HMGB1P1-201ENST00000522557 GOLGA7BQ2TAP0 167 aa2.35□□□□□ -2.03
HMGB1P1-201ENST00000522557 LDLRAD2Q5SZI1 272 aa2.35□□□□□ -2.03
HMGB1P1-201ENST00000522557 MTERF4Q7Z6M4 381 aaKnown RBP2.35□□□□□ -2.03
HMGB1P1-201ENST00000522557 OR5L1Q8NGL2 311 aa2.35□□□□□ -2.03
HMGB1P1-201ENST00000522557 OR5AK3PQ8NH89 298 aa2.35□□□□□ -2.03
HMGB1P1-201ENST00000522557 SHANK2-AS3Q9BTD1 123 aa2.35□□□□□ -2.03
HMGB1P1-201ENST00000522557 UGT2B28Q9BY64 529 aa2.35□□□□□ -2.03
HMGB1P1-201ENST00000522557 OR2D2Q9H210 308 aa2.35□□□□□ -2.03
HMGB1P1-201ENST00000522557 IMP3Q9NV31 184 aaKnown RBP2.35□□□□□ -2.03
HMGB1P1-201ENST00000522557 C14orf166Q9Y224 244 aaKnown RBP2.35□□□□□ -2.03
HMGB1P1-201ENST00000522557 KIF20BQ96Q89 1820 aa2.35□□□□□ -2.03
HMGB1P1-201ENST00000522557 C9J4A7 227 aa2.34□□□□□ -2.03
HMGB1P1-201ENST00000522557 F5H5P2 479 aa2.34□□□□□ -2.03
HMGB1P1-201ENST00000522557 KLRC4-KLRK1H3BQV0 150 aa2.34□□□□□ -2.03
HMGB1P1-201ENST00000522557 GOLGA8RI6L899 631 aa2.34□□□□□ -2.03
HMGB1P1-201ENST00000522557 TOR1AO14656 332 aa2.34□□□□□ -2.03
HMGB1P1-201ENST00000522557 PHYHO14832 338 aa2.34□□□□□ -2.03
HMGB1P1-201ENST00000522557 CETN3O15182 167 aa2.34□□□□□ -2.03
HMGB1P1-201ENST00000522557 IGLV3-19P01714 112 aa2.34□□□□□ -2.03
HMGB1P1-201ENST00000522557 TRGV3P03979 118 aa2.34□□□□□ -2.03
HMGB1P1-201ENST00000522557 RD3LP0DJH9 198 aa2.34□□□□□ -2.03
HMGB1P1-201ENST00000522557 RNASE2P10153 161 aaKnown RBP2.34□□□□□ -2.03
HMGB1P1-201ENST00000522557 SPNP16150 400 aa2.34□□□□□ -2.03
HMGB1P1-201ENST00000522557 PSMB9P28065 219 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms