RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 TNRC18O15417 2968 aaPredicted RBP4.27□□□□□ -1.73
SDC2-204ENST00000519914 PHF1O43189 567 aaPredicted RBP4.27□□□□□ -1.73
SDC2-204ENST00000519914 OR7C1O76099 320 aaPredicted RBP4.27□□□□□ -1.73
SDC2-204ENST00000519914 CNOT4O95628 575 aaKnown RBP4.27□□□□□ -1.73
SDC2-204ENST00000519914 IL18BPO95998 194 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 MT-CO3P00414 261 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 IGHG3P01860 377 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 SFTA3P0C7M3 94 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 OR8U8P0C7N1 319 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 SP9P0CG40 484 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 ZNF14P17017 642 aaPredicted RBP4.27□□□□□ -1.73
SDC2-204ENST00000519914 TUBG1P23258 451 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 CD200P41217 278 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 WNT5AP41221 380 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 MAGEA5P43359 124 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 NPBWR1P48145 328 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 MEOX1P50221 254 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 GPM6AP51674 278 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 FOXG1P55316 489 aaPredicted RBP4.27□□□□□ -1.73
SDC2-204ENST00000519914 FXYD4P59646 89 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 RAB1AP62820 205 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 HLA-DRB3P79483 266 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 EWSR1Q01844 656 aaKnown RBP eCLIP4.27□□□□□ -1.73
SDC2-204ENST00000519914 PAX5Q02548 391 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 ZNF266Q14584 549 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 GNMTQ14749 295 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 ZNF146Q15072 292 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 GUSBP1Q15486 140 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 SP6Q3SY56 376 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 PHLDA2Q53GA4 152 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 Q6P435 159 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 TEPPQ6URK8 271 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 TBC1D26Q86UD7 250 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 ODF3L1Q8IXM7 274 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 OR2C3Q8N628 320 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 SUMF2Q8NBJ7 301 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 OR11L1Q8NGX0 322 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 OR5R1Q8NH85 324 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 FAM216AQ8WUB2 273 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 ZCCHC14Q8WYQ9 949 aaKnown RBP4.27□□□□□ -1.73
SDC2-204ENST00000519914 LSM10Q969L4 123 aaKnown RBP4.27□□□□□ -1.73
SDC2-204ENST00000519914 SLAMF9Q96A28 289 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 BSCL2Q96G97 398 aaPredicted RBP4.27□□□□□ -1.73
SDC2-204ENST00000519914 WDYHV1Q96HA8 205 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 GGACTQ9BVM4 153 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 PARD6GQ9BYG4 376 aaPredicted RBP4.27□□□□□ -1.73
SDC2-204ENST00000519914 OPN3Q9H1Y3 402 aaPredicted RBP4.27□□□□□ -1.73
SDC2-204ENST00000519914 HRH4Q9H3N8 390 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 PLEKHF2Q9H8W4 249 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 TREM1Q9NP99 234 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 OR2S2Q9NQN1 319 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 TUBG2Q9NRH3 451 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 GAR1Q9NY12 217 aaKnown RBP4.27□□□□□ -1.73
SDC2-204ENST00000519914 WASF3Q9UPY6 502 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 GOLT1BQ9Y3E0 138 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 OR2W1Q9Y3N9 320 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 RNF115Q9Y4L5 304 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 WIPI2Q9Y4P8 454 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 MMP24Q9Y5R2 645 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 ARID1AO14497 2285 aa4.27□□□□□ -1.73
SDC2-204ENST00000519914 SPEGQ15772 3267 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 A0A087X0M5 115 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 TRAV1-1A0A0B4J248 108 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 IGKV1D-13A0A0B4J2D9 117 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 A0A1B0GX30 115 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 MEX3AA1L020 520 aaKnown RBP4.26□□□□□ -1.73
SDC2-204ENST00000519914 IGSF23A1L1A6 192 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 NKX2-6A6NCS4 301 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 ANKRD30BLA7E2S9 258 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 COLCA2A8K830 154 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 IQCF6A8MYZ5 107 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 SEC14L6B5MCN3 397 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 C9JQL5 133 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 PGLYRP1O75594 196 aaPredicted RBP4.26□□□□□ -1.73
SDC2-204ENST00000519914 NGFP01138 241 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 IGHV2-5P01817 119 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 HLA-HP01893 362 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 SCTP09683 121 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 OR8U9P0C7N5 309 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 IGKV1-13P0DP09 117 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 PAX1P15863 534 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 SELEP16581 610 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 F2RP25116 425 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 NKX2-1P43699 371 aaPredicted RBP4.26□□□□□ -1.73
SDC2-204ENST00000519914 CDX1P47902 265 aaPredicted RBP4.26□□□□□ -1.73
SDC2-204ENST00000519914 IDH3GP51553 393 aaPredicted RBP4.26□□□□□ -1.73
SDC2-204ENST00000519914 PAX9P55771 341 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 TAS2R30P59541 319 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 FABP9Q0Z7S8 132 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 PMS2P11Q13670 270 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 SLC10A1Q14973 349 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 RHEBQ15382 184 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 USF2Q15853 346 aaPredicted RBP4.26□□□□□ -1.73
SDC2-204ENST00000519914 GABRA6Q16445 453 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 GUK1Q16774 197 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 MIDNQ504T8 468 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 ZNF766Q5HY98 468 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 FBXW9Q5XUX1 488 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 SPSB3Q6PJ21 355 aa4.26□□□□□ -1.73
SDC2-204ENST00000519914 IGFL2Q6UWQ7 119 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms