RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 MMDQ15546 238 aa4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 SSX1Q16384 188 aa4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 TIMM50Q3ZCQ8 353 aa4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 PDLIM3Q53GG5 364 aaPredicted RBP4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 SAMD5Q5TGI4 173 aa4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 Q6ZS49 121 aa4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 C6orf201Q7Z4U5 140 aa4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 TPRA1Q86W33 373 aa4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 LYG1Q8N1E2 194 aa4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 STPG2Q8N412 459 aa4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 PRR18Q8N4B5 295 aa4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 TCTEX1D1Q8N7M0 179 aa4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 RNF152Q8N8N0 203 aa4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 Q8N9W7 124 aa4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 OR5AU1Q8NGC0 362 aa4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 SGCDQ92629 289 aa4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 LEAP2Q969E1 77 aa4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 TMEM203Q969S6 136 aa4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 FAM3DQ96BQ1 224 aa4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 R3HDM4Q96D70 268 aa4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 RCC1LQ96I51 464 aaKnown RBP4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 EAF1Q96JC9 268 aaPredicted RBP4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 S1PR3Q99500 378 aa4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 CITED2Q99967 270 aaPredicted RBP4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 SULT4A1Q9BR01 284 aa4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 NICN1Q9BSH3 213 aa4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 CABLES2Q9BTV7 478 aa4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 TOLLIPQ9H0E2 274 aa4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 IFI27L2Q9H2X8 130 aa4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 CHMP1AQ9HD42 196 aaPredicted RBP4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 STUB1Q9UNE7 303 aa4.76□□□□□ -1.65
SCARNA18.1-201ENST00000516330 PKD1L1Q8TDX9 2849 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 A0A0A6YYH2 397 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 IGHV3-43A0A0B4J1X8 118 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 UBE2QL1A1L167 161 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 A6NJ64 397 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 NOTOA8MTQ0 251 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 MFNGO00587 321 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 WIPF1O43516 503 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 IGF1P05019 195 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 ELANEP08246 267 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 IGHV3-43DP0DP04 118 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 CD28P10747 220 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 HIST1H1DP16402 221 aaKnown RBP4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 VDAC1P21796 283 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 DTYMKP23919 212 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 CD24P25063 80 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 MC5RP33032 325 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 SOX6P35712 828 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 PPP1CCP36873 323 aaKnown RBP4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 GPR12P47775 334 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 CRIP2P52943 208 aaPredicted RBP4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 PITPNAQ00169 270 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 DEFA6Q01524 100 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 TAGLNQ01995 201 aaKnown RBP4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 DCTN2Q13561 401 aaKnown RBP4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 DIAPH2-AS1Q14236 149 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 BEAN1Q3B7T3 259 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 TMEM95Q3KNT9 176 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 CT45A1Q5HYN5 189 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 OR10K2Q6IF99 312 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 TEX38Q6PEX7 206 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 ZNF773Q6PK81 442 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 CENPVQ7Z7K6 275 aaPredicted RBP4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 MOB3BQ86TA1 216 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 ODF3L1Q8IXM7 274 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 SPARTQ8N0X7 666 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 WFDC9Q8NEX5 89 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 OR10V1Q8NGI7 309 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 OR4A4PQ8NGN8 299 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 OR1L1Q8NH94 360 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 CT45A3Q8NHU0 189 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 CCDC107Q8WV48 283 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 IL1F10Q8WWZ1 152 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 PHF21AQ96BD5 680 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 RAB3CQ96E17 227 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 GFI1Q99684 422 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 RNF5Q99942 180 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 RASL11BQ9BPW5 248 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 NABP2Q9BQ15 211 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 CMSS1Q9BQ75 279 aaKnown RBP4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 MCRIP2Q9BUT9 160 aaKnown RBP4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 VCX3AQ9NNX9 186 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 KIAA1456Q9P272 454 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 ZMAT5Q9UDW3 170 aaKnown RBP4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 SLC23A1Q9UHI7 598 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 RAB22AQ9UL26 194 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 AK6Q9Y3D8 172 aaKnown RBP4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 ETV7Q9Y603 341 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 WNK1Q9H4A3 2382 aa4.75□□□□□ -1.65
SCARNA18.1-201ENST00000516330 A0A0A6YYD4 124 aa4.74□□□□□ -1.65
SCARNA18.1-201ENST00000516330 TRAV39A0A0B4J263 110 aa4.74□□□□□ -1.65
SCARNA18.1-201ENST00000516330 TMEM272A0A1B0GTI8 110 aa4.74□□□□□ -1.65
SCARNA18.1-201ENST00000516330 A0A1W2PPE3 182 aa4.74□□□□□ -1.65
SCARNA18.1-201ENST00000516330 TCRBV4S1A1TA0A5B7 111 aa4.74□□□□□ -1.65
SCARNA18.1-201ENST00000516330 NCBP2LA6PVI3 153 aaKnown RBP4.74□□□□□ -1.65
SCARNA18.1-201ENST00000516330 RAB27BO00194 218 aa4.74□□□□□ -1.65
SCARNA18.1-201ENST00000516330 SLC31A2O15432 143 aa4.74□□□□□ -1.65
SCARNA18.1-201ENST00000516330 NBR2O15453 112 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms