RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 PPP1CCP36873 323 aaKnown RBP7.71□□□□□ -1.18
RNF4-221ENST00000513643 SRSF7Q16629 238 aaKnown RBP eCLIP7.71□□□□□ -1.18
RNF4-221ENST00000513643 TREML4Q6UXN2 200 aa7.71□□□□□ -1.18
RNF4-221ENST00000513643 Q6ZS49 121 aa7.71□□□□□ -1.18
RNF4-221ENST00000513643 ZNF833PQ6ZTB9 187 aa7.71□□□□□ -1.18
RNF4-221ENST00000513643 C5orf56Q8N8D9 126 aa7.71□□□□□ -1.18
RNF4-221ENST00000513643 TSPAN14Q8NG11 270 aa7.71□□□□□ -1.18
RNF4-221ENST00000513643 OR10V1Q8NGI7 309 aa7.71□□□□□ -1.18
RNF4-221ENST00000513643 OR10R2Q8NGX6 335 aa7.71□□□□□ -1.18
RNF4-221ENST00000513643 CAPSLQ8WWF8 208 aa7.71□□□□□ -1.18
RNF4-221ENST00000513643 EAF1Q96JC9 268 aaPredicted RBP7.71□□□□□ -1.18
RNF4-221ENST00000513643 AKR1E2Q96JD6 320 aa7.71□□□□□ -1.18
RNF4-221ENST00000513643 KCTD7Q96MP8 289 aa7.71□□□□□ -1.18
RNF4-221ENST00000513643 CENPOQ9BU64 300 aa7.71□□□□□ -1.18
RNF4-221ENST00000513643 IFI27L2Q9H2X8 130 aa7.71□□□□□ -1.18
RNF4-221ENST00000513643 RNF167Q9H6Y7 350 aa7.71□□□□□ -1.18
RNF4-221ENST00000513643 C12orf4Q9NQ89 552 aa7.71□□□□□ -1.18
RNF4-221ENST00000513643 MGAT4AQ9UM21 535 aa7.71□□□□□ -1.18
RNF4-221ENST00000513643 SERPINE3A8MV23 424 aa7.7□□□□□ -1.18
RNF4-221ENST00000513643 ZNF736B4DX44 427 aaPredicted RBP7.7□□□□□ -1.18
RNF4-221ENST00000513643 M0QZ24 198 aa7.7□□□□□ -1.18
RNF4-221ENST00000513643 TMEM127O75204 238 aa7.7□□□□□ -1.18
RNF4-221ENST00000513643 TNFAIP8O95379 198 aa7.7□□□□□ -1.18
RNF4-221ENST00000513643 DIRAS3O95661 229 aa7.7□□□□□ -1.18
RNF4-221ENST00000513643 IGKV1D-33P01593 117 aa7.7□□□□□ -1.18
RNF4-221ENST00000513643 IGKV1-33P01594 117 aa7.7□□□□□ -1.18
RNF4-221ENST00000513643 SCTP09683 121 aa7.7□□□□□ -1.18
RNF4-221ENST00000513643 CLEC2LP0C7M8 214 aa7.7□□□□□ -1.18
RNF4-221ENST00000513643 HIST1H1DP16402 221 aaKnown RBP7.7□□□□□ -1.18
RNF4-221ENST00000513643 IL3RAP26951 378 aa7.7□□□□□ -1.18
RNF4-221ENST00000513643 REG1BP48304 166 aa7.7□□□□□ -1.18
RNF4-221ENST00000513643 SCAND1P57086 179 aa7.7□□□□□ -1.18
RNF4-221ENST00000513643 CD83Q01151 205 aa7.7□□□□□ -1.18
RNF4-221ENST00000513643 NEDD8Q15843 81 aa7.7□□□□□ -1.18
RNF4-221ENST00000513643 TCTEX1D4Q5JR98 221 aa7.7□□□□□ -1.18
RNF4-221ENST00000513643 FAM71F2Q6NXP2 309 aa7.7□□□□□ -1.18
RNF4-221ENST00000513643 SFXN4Q6P4A7 337 aa7.7□□□□□ -1.18
RNF4-221ENST00000513643 PRR18Q8N4B5 295 aa7.7□□□□□ -1.18
RNF4-221ENST00000513643 RAB3CQ96E17 227 aa7.7□□□□□ -1.18
RNF4-221ENST00000513643 ABHD14AQ9BUJ0 271 aa7.7□□□□□ -1.18
RNF4-221ENST00000513643 PARP12Q9H0J9 701 aaKnown RBP7.7□□□□□ -1.18
RNF4-221ENST00000513643 GHITMQ9H3K2 345 aa7.7□□□□□ -1.18
RNF4-221ENST00000513643 MOB4Q9Y3A3 225 aa7.7□□□□□ -1.18
RNF4-221ENST00000513643 TRDCB7Z8K6 153 aa7.69□□□□□ -1.18
RNF4-221ENST00000513643 RGS11O94810 467 aa7.69□□□□□ -1.18
RNF4-221ENST00000513643 MOSP00540 346 aa7.69□□□□□ -1.18
RNF4-221ENST00000513643 IGHG2P01859 326 aa7.69□□□□□ -1.18
RNF4-221ENST00000513643 FCGR3AP08637 254 aa7.69□□□□□ -1.18
RNF4-221ENST00000513643 TMEM11P17152 192 aa7.69□□□□□ -1.18
RNF4-221ENST00000513643 HLA-DRB3P79483 266 aa7.69□□□□□ -1.18
RNF4-221ENST00000513643 LSAMPQ13449 338 aa7.69□□□□□ -1.18
RNF4-221ENST00000513643 TMEM95Q3KNT9 176 aa7.69□□□□□ -1.18
RNF4-221ENST00000513643 ABCA11PQ4W5N1 156 aa7.69□□□□□ -1.18
RNF4-221ENST00000513643 MOB3BQ86TA1 216 aa7.69□□□□□ -1.18
RNF4-221ENST00000513643 TGIF2LXQ8IUE1 241 aa7.69□□□□□ -1.18
RNF4-221ENST00000513643 FAM71E2Q8N5Q1 922 aa7.69□□□□□ -1.18
RNF4-221ENST00000513643 Q8N9W7 124 aa7.69□□□□□ -1.18
RNF4-221ENST00000513643 OR8H1Q8NGG4 311 aa7.69□□□□□ -1.18
RNF4-221ENST00000513643 OR2T10Q8NGZ9 312 aa7.69□□□□□ -1.18
RNF4-221ENST00000513643 NABP2Q9BQ15 211 aa7.69□□□□□ -1.18
RNF4-221ENST00000513643 CMSS1Q9BQ75 279 aaKnown RBP7.69□□□□□ -1.18
RNF4-221ENST00000513643 CHCHD6Q9BRQ6 235 aa7.69□□□□□ -1.18
RNF4-221ENST00000513643 CABLES2Q9BTV7 478 aa7.69□□□□□ -1.18
RNF4-221ENST00000513643 C11orf54Q9H0W9 315 aaPredicted RBP7.69□□□□□ -1.18
RNF4-221ENST00000513643 MMP27Q9H306 513 aa7.69□□□□□ -1.18
RNF4-221ENST00000513643 ABRACLQ9P1F3 81 aa7.69□□□□□ -1.18
RNF4-221ENST00000513643 SLC23A1Q9UHI7 598 aa7.69□□□□□ -1.18
RNF4-221ENST00000513643 GAB2Q9UQC2 676 aa7.69□□□□□ -1.18
RNF4-221ENST00000513643 SAA2-SAA4A0A096LPE2 208 aa7.68□□□□□ -1.18
RNF4-221ENST00000513643 TRBV6-7A0A0A0MS04 114 aa7.68□□□□□ -1.18
RNF4-221ENST00000513643 IGHV3-72A0A0B4J1Y9 119 aa7.68□□□□□ -1.18
RNF4-221ENST00000513643 SMIM30A4D0T7 59 aa7.68□□□□□ -1.18
RNF4-221ENST00000513643 METTL21EPA6NDL7 271 aa7.68□□□□□ -1.18
RNF4-221ENST00000513643 SH2D7A6NKC9 451 aaPredicted RBP7.68□□□□□ -1.18
RNF4-221ENST00000513643 TSPAN15O95858 294 aa7.68□□□□□ -1.18
RNF4-221ENST00000513643 LPLP06858 475 aa7.68□□□□□ -1.18
RNF4-221ENST00000513643 SAA2P0DJI9 122 aaPredicted RBP7.68□□□□□ -1.18
RNF4-221ENST00000513643 CT45A6P0DMU7 189 aa7.68□□□□□ -1.18
RNF4-221ENST00000513643 CT45A5P0DMU8 189 aa7.68□□□□□ -1.18
RNF4-221ENST00000513643 CT45A7P0DMV0 189 aa7.68□□□□□ -1.18
RNF4-221ENST00000513643 VSIG10L2P0DP72 767 aa7.68□□□□□ -1.18
RNF4-221ENST00000513643 CD28P10747 220 aa7.68□□□□□ -1.18
RNF4-221ENST00000513643 SNRPBP14678 240 aaKnown RBP7.68□□□□□ -1.18
RNF4-221ENST00000513643 GNB3P16520 340 aa7.68□□□□□ -1.18
RNF4-221ENST00000513643 ZBTB25P24278 435 aa7.68□□□□□ -1.18
RNF4-221ENST00000513643 VDAC2P45880 294 aaPredicted RBP7.68□□□□□ -1.18
RNF4-221ENST00000513643 OR3A3P47888 321 aa7.68□□□□□ -1.18
RNF4-221ENST00000513643 F2RL1P55085 397 aa7.68□□□□□ -1.18
RNF4-221ENST00000513643 ZNF260Q3ZCT1 412 aa7.68□□□□□ -1.18
RNF4-221ENST00000513643 HACD4Q5VWC8 232 aa7.68□□□□□ -1.18
RNF4-221ENST00000513643 LYG1Q8N1E2 194 aa7.68□□□□□ -1.18
RNF4-221ENST00000513643 OR4A4PQ8NGN8 299 aa7.68□□□□□ -1.18
RNF4-221ENST00000513643 SLC25A38Q96DW6 304 aa7.68□□□□□ -1.18
RNF4-221ENST00000513643 RBMXL1Q96E39 390 aaKnown RBP7.68□□□□□ -1.18
RNF4-221ENST00000513643 RITA1Q96K30 269 aa7.68□□□□□ -1.18
RNF4-221ENST00000513643 ABCG5Q9H222 651 aa7.68□□□□□ -1.18
RNF4-221ENST00000513643 LIN7CQ9NUP9 197 aaKnown RBP7.68□□□□□ -1.18
RNF4-221ENST00000513643 OR1A1Q9P1Q5 309 aa7.68□□□□□ -1.18
RNF4-221ENST00000513643 DAPK2Q9UIK4 370 aa7.68□□□□□ -1.18
RNF4-221ENST00000513643 ZNF580Q9UK33 172 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms