RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 MRPS16Q9Y3D3 137 aaKnown RBP0.97□□□□□ -2.25
SMN2-208ENST00000508258 PHLDA3Q9Y5J5 127 aa0.97□□□□□ -2.25
SMN2-208ENST00000508258 SNX10Q9Y5X0 201 aa0.97□□□□□ -2.25
SMN2-208ENST00000508258 R4GN34 69 aa0.97□□□□□ -2.25
SMN2-208ENST00000508258 U3KQK5 164 aa0.97□□□□□ -2.25
SMN2-208ENST00000508258 ADAMTSL1Q8N6G6 1762 aa0.97□□□□□ -2.25
SMN2-208ENST00000508258 PLB1Q6P1J6 1458 aa0.97□□□□□ -2.25
SMN2-208ENST00000508258 THSD7AQ9UPZ6 1657 aa0.97□□□□□ -2.25
SMN2-208ENST00000508258 C9orf84Q5VXU9 1444 aa0.97□□□□□ -2.25
SMN2-208ENST00000508258 NID2Q14112 1375 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 ATAD5Q96QE3 1844 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 COL18A1P39060 1754 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 ZBED9Q6R2W3 1325 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 YLPM1P49750 1951 aaKnown RBP0.96□□□□□ -2.26
SMN2-208ENST00000508258 TEX50A0A1B0GTY4 177 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 A0A1W2PQ67 120 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 A6NED7 52 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 GGTLC3B5MD39 225 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 LRRN3E7EW58 273 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 PFDN6O15212 129 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 SSNA1O43805 119 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 SH2D1AO60880 128 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 CPSF4O95639 269 aaKnown RBP0.96□□□□□ -2.26
SMN2-208ENST00000508258 IGLV3-19P01714 112 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 IGHMP01871 453 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 HBZP02008 142 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 OPN1SWP03999 348 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 TYMSP04818 313 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 IL6P05231 212 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 SERPINA6P08185 405 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 GUSBP08236 651 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 OR12D1P0DN82 309 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 ORM2P19652 201 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 PRPS1L1P21108 318 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 OPRM1P35372 400 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 HSPA9P38646 679 aaKnown RBP0.96□□□□□ -2.26
SMN2-208ENST00000508258 OR1E2P47887 323 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 NKX2-5P52952 324 aaPredicted RBP0.96□□□□□ -2.26
SMN2-208ENST00000508258 BLVRAP53004 296 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 LINC00313P59037 77 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 CXCR4P61073 352 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 FGF12P61328 243 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 RPS24P62847 133 aaKnown RBP0.96□□□□□ -2.26
SMN2-208ENST00000508258 HPCAP84074 193 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 TMEM267Q0VDI3 215 aaPredicted RBP0.96□□□□□ -2.26
SMN2-208ENST00000508258 EBPQ15125 230 aaKnown RBP0.96□□□□□ -2.26
SMN2-208ENST00000508258 SLC9A3R2Q15599 337 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 OR8G1Q15617 311 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 IMPG1Q17R60 797 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 RGS21Q2M5E4 152 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 KRTAP25-1Q3LHN0 102 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 PYCR3Q53H96 274 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 SPIN4Q56A73 249 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 OGFRL1Q5TC84 451 aaPredicted RBP0.96□□□□□ -2.26
SMN2-208ENST00000508258 CST9Q5W186 159 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 AMMECR1LQ6DCA0 310 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 CD200R1LQ6Q8B3 271 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 LRRN1Q6UXK5 716 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 C10orf67Q8IYJ2 551 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 LYPD1Q8N2G4 141 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 ZFAND2AQ8N6M9 145 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 ZNF565Q8N9K5 539 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 GPR32P1Q8NGA4 272 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 OR2V1Q8NHB1 315 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 CYGBQ8WWM9 190 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 TMBIM1Q969X1 311 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 PTH2Q96A98 100 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 EBNA1BP2Q99848 306 aaKnown RBP0.96□□□□□ -2.26
SMN2-208ENST00000508258 C1QTNF6Q9BXI9 259 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 OR51B6Q9H340 312 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 DUSP21Q9H596 190 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 HRASLSQ9HDD0 168 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 FGFR1OP2Q9NVK5 253 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 BABAM2Q9NXR7 383 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 SLC23A2Q9UGH3 650 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 POLR3HQ9Y535 204 aaPredicted RBP0.96□□□□□ -2.26
SMN2-208ENST00000508258 PLCH2O75038 1416 aa0.96□□□□□ -2.26
SMN2-208ENST00000508258 SNAPC4Q5SXM2 1469 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 K7EQS6 105 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 TGOLN2O43493 480 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 IFNA5P01569 189 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 ISG15P05161 165 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 IGHV3-30-3P0DP02 117 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 RNASE2P10153 161 aaKnown RBP0.95□□□□□ -2.26
SMN2-208ENST00000508258 ZNF708P17019 499 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 CRABP2P29373 138 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 RPL12P30050 165 aaKnown RBP0.95□□□□□ -2.26
SMN2-208ENST00000508258 GABRA3P34903 492 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 DAPP51397 102 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 SNAP25P60880 206 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 HERVK_113P63121 156 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 FABP5Q01469 135 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 BSPH1Q075Z2 132 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 PPP1R1AQ13522 171 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 PDK2Q15119 407 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 MAPK14Q16539 360 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 ACSBG2Q5FVE4 666 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 TNFAIP8L2Q6P589 184 aaPredicted RBP0.95□□□□□ -2.26
SMN2-208ENST00000508258 DCXRQ7Z4W1 244 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 ATP5L2Q7Z4Y8 100 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms