RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 ZNF251Q9BRH9 671 aa8.99□□□□□ -0.97
HMGCS1-204ENST00000507293 UQCC2Q9BRT2 126 aa8.99□□□□□ -0.97
HMGCS1-204ENST00000507293 CST11Q9H112 138 aa8.99□□□□□ -0.97
HMGCS1-204ENST00000507293 KLK15Q9H2R5 256 aa8.99□□□□□ -0.97
HMGCS1-204ENST00000507293 OR51J1Q9H342 316 aa8.99□□□□□ -0.97
HMGCS1-204ENST00000507293 PARP11Q9NR21 331 aa8.99□□□□□ -0.97
HMGCS1-204ENST00000507293 CNOT2Q9NZN8 540 aaKnown RBP8.99□□□□□ -0.97
HMGCS1-204ENST00000507293 PSORS1C1Q9UIG5 152 aa8.99□□□□□ -0.97
HMGCS1-204ENST00000507293 U3KQK5 164 aa8.99□□□□□ -0.97
HMGCS1-204ENST00000507293 KMT2CQ8NEZ4 4911 aaKnown RBP8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 SAA2-SAA4A0A096LPE2 208 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 IGHV7-81A0A0B4J1V7 117 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 TRAV41A0A0B4J266 112 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 NBR2O15453 112 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 YPEL1O60688 119 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 RGS11O94810 467 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 HLA-DRB1P01911 266 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 GNAO1P09471 354 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 OR8U8P0C7N1 319 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 SAA2P0DJI9 122 aaPredicted RBP8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 MAPK3P27361 379 aaPredicted RBP8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 CHATP28329 748 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 BLVRBP30043 206 aaPredicted RBP8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 PPIFP30405 207 aaKnown RBP8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 GNB1P62873 340 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 HTD2P86397 168 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 KIAA0141Q14154 515 aaPredicted RBP8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 INSL4Q14641 139 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 HMGN3Q15651 99 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 OR10K2Q6IF99 312 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 TMEM65Q6PI78 240 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 ZNF833PQ6ZTB9 187 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 C8orf59Q8N0T1 100 aaPredicted RBP8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 ZNF491Q8N8L2 437 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 OR1N2Q8NGR9 330 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 THRSPQ92748 146 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 GALMQ96C23 342 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 UBE2E2Q96LR5 201 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 YPEL2Q96QA6 119 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 ASCL2Q99929 193 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 SULT4A1Q9BR01 284 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 CHCHD6Q9BRQ6 235 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 ANKRD60Q9BZ19 345 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 IFI27L2Q9H2X8 130 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 C8orf4Q9NR00 106 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 GHRLQ9UBU3 117 aa8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 ZNF256Q9Y2P7 627 aaPredicted RBP8.98□□□□□ -0.97
HMGCS1-204ENST00000507293 I3L521 148 aa8.97□□□□□ -0.97
HMGCS1-204ENST00000507293 LY86O95711 162 aa8.97□□□□□ -0.97
HMGCS1-204ENST00000507293 IGLV1-40P01703 118 aa8.97□□□□□ -0.97
HMGCS1-204ENST00000507293 UBBP0CG47 229 aa8.97□□□□□ -0.97
HMGCS1-204ENST00000507293 RUNX1Q01196 453 aa8.97□□□□□ -0.97
HMGCS1-204ENST00000507293 ZNF616Q08AN1 781 aa8.97□□□□□ -0.97
HMGCS1-204ENST00000507293 C5orf64Q2M2E5 130 aa8.97□□□□□ -0.97
HMGCS1-204ENST00000507293 RBM48Q5RL73 367 aaKnown RBP8.97□□□□□ -0.97
HMGCS1-204ENST00000507293 LY6G6FQ5SQ64 297 aa8.97□□□□□ -0.97
HMGCS1-204ENST00000507293 FAM27D1Q5T7N8 215 aa8.97□□□□□ -0.97
HMGCS1-204ENST00000507293 FAM131AQ6UXB0 335 aa8.97□□□□□ -0.97
HMGCS1-204ENST00000507293 C6orf201Q7Z4U5 140 aa8.97□□□□□ -0.97
HMGCS1-204ENST00000507293 NANOGP1Q8N7R0 232 aa8.97□□□□□ -0.97
HMGCS1-204ENST00000507293 BPIFB6Q8NFQ5 453 aa8.97□□□□□ -0.97
HMGCS1-204ENST00000507293 OR2AK2Q8NG84 335 aa8.97□□□□□ -0.97
HMGCS1-204ENST00000507293 IL1F10Q8WWZ1 152 aa8.97□□□□□ -0.97
HMGCS1-204ENST00000507293 NEDD4LQ96PU5 975 aa8.97□□□□□ -0.97
HMGCS1-204ENST00000507293 FAAP24Q9BTP7 215 aa8.97□□□□□ -0.97
HMGCS1-204ENST00000507293 KCNK15Q9H427 330 aa8.97□□□□□ -0.97
HMGCS1-204ENST00000507293 KIAA1456Q9P272 454 aa8.97□□□□□ -0.97
HMGCS1-204ENST00000507293 VSIG4Q9Y279 399 aa8.97□□□□□ -0.97
HMGCS1-204ENST00000507293 ERICH4A6NGS2 130 aa8.96□□□□□ -0.98
HMGCS1-204ENST00000507293 ST8SIA5O15466 376 aa8.96□□□□□ -0.98
HMGCS1-204ENST00000507293 NDUFA3O95167 84 aa8.96□□□□□ -0.98
HMGCS1-204ENST00000507293 RPS27AP62979 156 aaKnown RBP8.96□□□□□ -0.98
HMGCS1-204ENST00000507293 NDPQ00604 133 aa8.96□□□□□ -0.98
HMGCS1-204ENST00000507293 RCN1Q15293 331 aa8.96□□□□□ -0.98
HMGCS1-204ENST00000507293 ECSCRQ19T08 205 aa8.96□□□□□ -0.98
HMGCS1-204ENST00000507293 ACSM3Q53FZ2 586 aa8.96□□□□□ -0.98
HMGCS1-204ENST00000507293 GLT8D1Q68CQ7 371 aa8.96□□□□□ -0.98
HMGCS1-204ENST00000507293 LIN54Q6MZP7 749 aa8.96□□□□□ -0.98
HMGCS1-204ENST00000507293 FAM71F2Q6NXP2 309 aa8.96□□□□□ -0.98
HMGCS1-204ENST00000507293 LRRTM1Q86UE6 522 aa8.96□□□□□ -0.98
HMGCS1-204ENST00000507293 SVOPQ8N4V2 548 aa8.96□□□□□ -0.98
HMGCS1-204ENST00000507293 NPBQ8NG41 125 aa8.96□□□□□ -0.98
HMGCS1-204ENST00000507293 SETD6Q8TBK2 473 aa8.96□□□□□ -0.98
HMGCS1-204ENST00000507293 FBLIM1Q8WUP2 373 aa8.96□□□□□ -0.98
HMGCS1-204ENST00000507293 DCUN1D4Q92564 292 aa8.96□□□□□ -0.98
HMGCS1-204ENST00000507293 NICN1Q9BSH3 213 aa8.96□□□□□ -0.98
HMGCS1-204ENST00000507293 TMEM59Q9BXS4 323 aa8.96□□□□□ -0.98
HMGCS1-204ENST00000507293 CHMP1AQ9HD42 196 aaPredicted RBP8.96□□□□□ -0.98
HMGCS1-204ENST00000507293 ISYNA1Q9NPH2 558 aa8.96□□□□□ -0.98
HMGCS1-204ENST00000507293 PLCXD1Q9NUJ7 323 aa8.96□□□□□ -0.98
HMGCS1-204ENST00000507293 ABRACLQ9P1F3 81 aa8.96□□□□□ -0.98
HMGCS1-204ENST00000507293 STEAP1Q9UHE8 339 aa8.96□□□□□ -0.98
HMGCS1-204ENST00000507293 FBXO7Q9Y3I1 522 aa8.96□□□□□ -0.98
HMGCS1-204ENST00000507293 LRRC42Q9Y546 428 aa8.96□□□□□ -0.98
HMGCS1-204ENST00000507293 NBEAL2Q6ZNJ1 2754 aa8.95□□□□□ -0.98
HMGCS1-204ENST00000507293 A0A1W2PN81 502 aa8.95□□□□□ -0.98
HMGCS1-204ENST00000507293 ANKRD65E5RJM6 399 aa8.95□□□□□ -0.98
HMGCS1-204ENST00000507293 HTR2CP28335 458 aa8.95□□□□□ -0.98
HMGCS1-204ENST00000507293 CHRNA7P36544 502 aa8.95□□□□□ -0.98
HMGCS1-204ENST00000507293 RAB9AP51151 201 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 153.1 ms