RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 MRPS24Q96EL2 167 aaKnown RBP0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 SERPINB11Q96P15 392 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 HBEGFQ99075 208 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 CYTH2Q99418 400 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 MGLLQ99685 303 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 PRSS27Q9BQR3 290 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 HSPB9Q9BQS6 159 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 MED18Q9BUE0 208 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 C1QTNF6Q9BXI9 259 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 OR51E2Q9H255 320 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 SMDT1Q9H4I9 107 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 C11orf49Q9H6J7 331 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 AGPAT3Q9NRZ7 376 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 TXNL4BQ9NX01 149 aaKnown RBP0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 SNX24Q9Y343 169 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 HEY1Q9Y5J3 304 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 ZNF469Q96JG9 3925 aaPredicted RBP0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 MAP3K19Q56UN5 1328 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 WDR90Q96KV7 1748 aa0.58□□□□□ -2.32
HMGB1P29-201ENST00000505659 PCDH15Q96QU1 1955 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 RTTNQ86VV8 2226 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 FBN2P35556 2912 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 MUC21A0A0G2JKD1 596 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 GOLGA8QA0A0J9YX86 632 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 MUC21A0A140T8X8 626 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 A0A1B0GX12 115 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 DHRS12A0PJE2 317 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 GRIFINA4D1Z8 144 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 LINC00862A6NCI5 91 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 C8orf87E5RJ46 101 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 M0QYV0 167 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 SULT1C2O00338 296 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 UBFD1O14562 309 aaKnown RBP0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 GPR171O14626 319 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 POLR3GO15318 223 aaPredicted RBP0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 YKT6O15498 198 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 SGCEO43556 437 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 STK16O75716 305 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 CDK14O94921 469 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 TNFAIP8O95379 198 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 EPPINO95925 133 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 CD36P16671 472 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 GADD45AP24522 165 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 CD200P41217 278 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 SULT1A2P50226 295 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 OR2B6P58173 313 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 RAB8AP61006 207 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 BSPH1Q075Z2 132 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 TPRXLQ17RH7 258 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 MRPL51Q4U2R6 128 aaKnown RBP0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 CENPWQ5EE01 88 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 OR10J3Q5JRS4 329 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 RBM48Q5RL73 367 aaKnown RBP0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 HES3Q5TGS1 186 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 LGALS9CQ6DKI2 356 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 EBLN2Q6P2I7 272 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 VN1R4Q7Z5H5 301 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 C17orf78Q8N4C9 275 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 NATD1Q8N6N6 113 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 SPERTQ8NA61 448 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 ATP6V1C2Q8NEY4 427 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 OR51H1Q8NH63 302 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 TAMM41Q96BW9 452 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 SMIM12Q96EX1 92 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 UPK3BQ9BT76 320 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 CHST5Q9GZS9 411 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 GTSF1LQ9H1H1 148 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 UBQLN4Q9NRR5 601 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 MRM2Q9UI43 246 aaKnown RBP0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 DNAJC12Q9UKB3 198 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 PTPRSQ13332 1948 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 CCDC88CQ9P219 2028 aa0.57□□□□□ -2.32
HMGB1P29-201ENST00000505659 KIAA2026Q5HYC2 2103 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 IGHV3-73A0A0B4J1V6 119 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 TMEM235A6NFC5 223 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 F5H5K5 113 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 K7ERQ8 282 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 SYNGR1O43759 233 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 PSMG1O95456 288 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 NAPSAO96009 420 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 CD7P09564 240 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 LIMS3P0CW19 117 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 LIMS4P0CW20 117 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 IGHV3-30-3P0DP02 117 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 SLC25A16P16260 332 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 ORM2P19652 201 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 PVALBP20472 110 aaPredicted RBP0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 CFL1P23528 166 aaKnown RBP0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 AGTR1P30556 359 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 LCN1P31025 176 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 PPP1CCP36873 323 aaKnown RBP0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 PSMB3P49720 205 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 DLX6P56179 175 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 OR10A3P58181 314 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 FAM3AP98173 230 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 PDGFRLQ15198 375 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 ANGPT1Q15389 498 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 CLEC12BQ2HXU8 276 aa0.56□□□□□ -2.32
HMGB1P29-201ENST00000505659 TRMT12Q53H54 448 aaKnown RBP0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms