RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 SLC35A1P78382 337 aa4.17□□□□□ -1.74
NEDD4-203ENST00000502612 REG3AQ06141 175 aa4.17□□□□□ -1.74
NEDD4-203ENST00000502612 SRSF5Q13243 272 aaKnown RBP4.17□□□□□ -1.74
NEDD4-203ENST00000502612 NDUFA5Q16718 116 aa4.17□□□□□ -1.74
NEDD4-203ENST00000502612 MESTQ5EB52 335 aa4.17□□□□□ -1.74
NEDD4-203ENST00000502612 THEM4Q5T1C6 240 aa4.17□□□□□ -1.74
NEDD4-203ENST00000502612 ZNF684Q5T5D7 378 aa4.17□□□□□ -1.74
NEDD4-203ENST00000502612 TMEM244Q5VVB8 128 aa4.17□□□□□ -1.74
NEDD4-203ENST00000502612 GLT8D1Q68CQ7 371 aa4.17□□□□□ -1.74
NEDD4-203ENST00000502612 SNX29P2Q8IUI4 249 aa4.17□□□□□ -1.74
NEDD4-203ENST00000502612 OR6V1Q8N148 313 aa4.17□□□□□ -1.74
NEDD4-203ENST00000502612 OR51L1Q8NGJ5 315 aa4.17□□□□□ -1.74
NEDD4-203ENST00000502612 OR2Y1Q8NGV0 311 aa4.17□□□□□ -1.74
NEDD4-203ENST00000502612 RNF138Q8WVD3 245 aa4.17□□□□□ -1.74
NEDD4-203ENST00000502612 HGDQ93099 445 aa4.17□□□□□ -1.74
NEDD4-203ENST00000502612 OR8B4Q96RC9 309 aa4.17□□□□□ -1.74
NEDD4-203ENST00000502612 SDHCQ99643 169 aaPredicted RBP4.17□□□□□ -1.74
NEDD4-203ENST00000502612 ULBP3Q9BZM4 244 aa4.17□□□□□ -1.74
NEDD4-203ENST00000502612 SYT4Q9H2B2 425 aa4.17□□□□□ -1.74
NEDD4-203ENST00000502612 NEK6Q9HC98 313 aa4.17□□□□□ -1.74
NEDD4-203ENST00000502612 DIABLOQ9NR28 239 aa4.17□□□□□ -1.74
NEDD4-203ENST00000502612 SLC39A1Q9NY26 324 aa4.17□□□□□ -1.74
NEDD4-203ENST00000502612 EMC3Q9P0I2 261 aa4.17□□□□□ -1.74
NEDD4-203ENST00000502612 NUBP2Q9Y5Y2 271 aa4.17□□□□□ -1.74
NEDD4-203ENST00000502612 FANCMQ8IYD8 2048 aa4.17□□□□□ -1.74
NEDD4-203ENST00000502612 HEATR5BQ9P2D3 2071 aa4.17□□□□□ -1.74
NEDD4-203ENST00000502612 PRRC2BQ5JSZ5 2229 aaKnown RBP4.16□□□□□ -1.74
NEDD4-203ENST00000502612 IGHV1-45A0A0A0MS14 117 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 A0A0A6YYH2 397 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 LOC102725191A0A1B0GVB3 256 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 A6NJ64 397 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 ZNF726A6NNF4 738 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 GABARAPH6UMI1 98 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 ZNF593O00488 134 aaPredicted RBP4.16□□□□□ -1.74
NEDD4-203ENST00000502612 CBR3O75828 277 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 OR2J2O76002 312 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 RPP14O95059 124 aaKnown RBP4.16□□□□□ -1.74
NEDD4-203ENST00000502612 ISG15P05161 165 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 GIPP09681 153 aaPredicted RBP4.16□□□□□ -1.74
NEDD4-203ENST00000502612 UBCP0CG48 685 aaKnown RBP4.16□□□□□ -1.74
NEDD4-203ENST00000502612 OR8G3PP0DMU2 310 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 GLP1RP43220 463 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 CAV3P56539 151 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 DSCR4P56555 118 aaPredicted RBP4.16□□□□□ -1.74
NEDD4-203ENST00000502612 RPS15P62841 145 aaKnown RBP4.16□□□□□ -1.74
NEDD4-203ENST00000502612 SSBP1Q04837 148 aaKnown RBP4.16□□□□□ -1.74
NEDD4-203ENST00000502612 SCRN3Q0VDG4 424 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 EIF3IQ13347 325 aaKnown RBP4.16□□□□□ -1.74
NEDD4-203ENST00000502612 ANGPT1Q15389 498 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 OR7A5Q15622 319 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 SHISA6Q6ZSJ9 500 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 SLC35D2Q76EJ3 337 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 NDUFAF7Q7L592 441 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 SSX6Q7RTT6 188 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 LUZP2Q86TE4 346 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 PLCZ1Q86YW0 608 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 TMEM156Q8N614 296 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 TPRX1Q8N7U7 411 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 CCDC54Q8NEL0 328 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 OR1J4Q8NGS1 313 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 OR2G2Q8NGZ5 317 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 TSEN15Q8WW01 171 aaKnown RBP4.16□□□□□ -1.74
NEDD4-203ENST00000502612 IP6K3Q96PC2 410 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 DERL3Q96Q80 235 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 MARVELD1Q9BSK0 173 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 DDA1Q9BW61 102 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 ABCG5Q9H222 651 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 C1orf198Q9H425 327 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 PTTG3PQ9NZH4 202 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 KCNIP1Q9NZI2 227 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 CLCF1Q9UBD9 225 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 MRM2Q9UI43 246 aaKnown RBP4.16□□□□□ -1.74
NEDD4-203ENST00000502612 TBC1D24Q9ULP9 559 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 HHLA2Q9UM44 414 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 CACNG2Q9Y698 323 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 U3KQA8 63 aa4.16□□□□□ -1.74
NEDD4-203ENST00000502612 IGLV1-36A0A0B4J1U3 117 aa4.15□□□□□ -1.75
NEDD4-203ENST00000502612 A0A0G2JMP0 313 aa4.15□□□□□ -1.75
NEDD4-203ENST00000502612 A0A0X1KG70 313 aa4.15□□□□□ -1.75
NEDD4-203ENST00000502612 LINC00854A0A1B0GVQ3 168 aa4.15□□□□□ -1.75
NEDD4-203ENST00000502612 A0A1W2PPE3 182 aa4.15□□□□□ -1.75
NEDD4-203ENST00000502612 TVP23AA6NH52 213 aa4.15□□□□□ -1.75
NEDD4-203ENST00000502612 OR4C45A6NMZ5 311 aa4.15□□□□□ -1.75
NEDD4-203ENST00000502612 C12orf77C9JDV5 145 aa4.15□□□□□ -1.75
NEDD4-203ENST00000502612 FTCDNL1E5RQL4 147 aa4.15□□□□□ -1.75
NEDD4-203ENST00000502612 INMT-MINDY4F8WBC2 141 aa4.15□□□□□ -1.75
NEDD4-203ENST00000502612 BOLA2-SMG1P6H3BVE0 249 aa4.15□□□□□ -1.75
NEDD4-203ENST00000502612 SULT1C2O00338 296 aa4.15□□□□□ -1.75
NEDD4-203ENST00000502612 PLA2G10O15496 165 aa4.15□□□□□ -1.75
NEDD4-203ENST00000502612 UPK3AO75631 287 aa4.15□□□□□ -1.75
NEDD4-203ENST00000502612 EIF4EP06730 217 aaKnown RBP4.15□□□□□ -1.75
NEDD4-203ENST00000502612 ZNF43P17038 809 aa4.15□□□□□ -1.75
NEDD4-203ENST00000502612 RCC1P18754 421 aaPredicted RBP4.15□□□□□ -1.75
NEDD4-203ENST00000502612 HSD11B1P28845 292 aa4.15□□□□□ -1.75
NEDD4-203ENST00000502612 ERP29P30040 261 aaKnown RBP4.15□□□□□ -1.75
NEDD4-203ENST00000502612 SLC6A1P30531 599 aa4.15□□□□□ -1.75
NEDD4-203ENST00000502612 DNASE1L1P49184 302 aa4.15□□□□□ -1.75
NEDD4-203ENST00000502612 HCCSP53701 268 aa4.15□□□□□ -1.75
NEDD4-203ENST00000502612 RPS11P62280 158 aaKnown RBP eCLIP4.15□□□□□ -1.75
NEDD4-203ENST00000502612 MRPS15P82914 257 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms